Basic Information

Insect: Odynerus spinipes
Gene Symbol: RREB1
Assembly: GCA_032403825.1
Location: JAIFRP010004357.1:3282749-3294153[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 0.68 10.3 0.2 1 23 38 60 38 60 0.97

2 15 0.00076 0.048 13.9 1.2 1 23 74 96 74 96 0.97

3 15 7e-06 0.00044 20.3 1.0 1 23 102 125 102 125 0.97

4 15 0.011 0.71 10.2 0.0 1 23 220 244 220 244 0.95

5 15 0.2 13 6.3 2.9 2 23 250 272 250 272 0.94

6 15 6 3.8e+02 1.6 0.4 1 19 328 346 328 348 0.87

7 15 0.2 12 6.3 0.1 1 23 462 484 462 484 0.96

8 15 2.8e-05 0.0018 18.4 0.3 1 23 493 515 493 515 0.98

9 15 0.0012 0.077 13.3 2.8 1 23 521 544 521 544 0.97

10 15 0.00045 0.028 14.6 3.0 1 23 929 952 929 952 0.97

11 15 0.00064 0.041 14.1 0.1 3 23 1238 1258 1236 1258 0.97

12 15 0.004 0.25 11.6 2.2 1 23 1325 1349 1325 1349 0.97

13 15 1.8 1.2e+02 3.2 2.4 1 23 1433 1456 1433 1456 0.94

14 15 0.011 0.69 10.2 0.4 2 23 1507 1528 1506 1528 0.94

15 15 1.3 82 3.7 8.2 1 23 1534 1556 1534 1556 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	0.68	10.3	0.2	1	23	38	60	38	60	0.97
2	15	0.00076	0.048	13.9	1.2	1	23	74	96	74	96	0.97
3	15	7e-06	0.00044	20.3	1.0	1	23	102	125	102	125	0.97
4	15	0.011	0.71	10.2	0.0	1	23	220	244	220	244	0.95
5	15	0.2	13	6.3	2.9	2	23	250	272	250	272	0.94
6	15	6	3.8e+02	1.6	0.4	1	19	328	346	328	348	0.87
7	15	0.2	12	6.3	0.1	1	23	462	484	462	484	0.96
8	15	2.8e-05	0.0018	18.4	0.3	1	23	493	515	493	515	0.98
9	15	0.0012	0.077	13.3	2.8	1	23	521	544	521	544	0.97
10	15	0.00045	0.028	14.6	3.0	1	23	929	952	929	952	0.97
11	15	0.00064	0.041	14.1	0.1	3	23	1238	1258	1236	1258	0.97
12	15	0.004	0.25	11.6	2.2	1	23	1325	1349	1325	1349	0.97
13	15	1.8	1.2e+02	3.2	2.4	1	23	1433	1456	1433	1456	0.94
14	15	0.011	0.69	10.2	0.4	2	23	1507	1528	1506	1528	0.94
15	15	1.3	82	3.7	8.2	1	23	1534	1556	1534	1556	0.98

Sequence Information

Coding Sequence: ATGGATTACTCGCCGAAAGtGACAGTAAAAAGCGAGCCGGATCAAGAACAGGTCGAGACACAGGCGGATGCTGCATCTCCGACATCAAGTGTGGACTTGCCTGAAAGCGCGCATCCGTGTCCAGCGTGCCCGACGATACTCTCGACGACTCGCGATCTAACGAATCACCTACGAGAGCACAACTCGCCACGGAGCACCGATTACGGTGGCGAGGAGGACTACTGTTGCGCCGTTTGCCACAAGGTATTGAGCTCGGCGAGTTCCTTGGACCGTCACGTACTCGTTCATTCCGGCGAGCGTCCGTTCAAGTGCAAGTACTGCGAGATGGCCTTCACGACGAACGGCAACATGAACAGGCACGTGAAGAGCGCCCACCGTGGTGGGCAGTCGCCTCATAGTTGTACGGAATCCGAGGGTACCAGCAGCGATTCCGAGAAGCCATCGAAGAGACAACATATCGAGGAATACAATAACAACGAGATCGCTAAACGAACTTCACCGGATTTCATGGGCAAGGAAAGATCGCCGAACAACCTGATCGCGAAACGGAAATGCCCGGATTACGAAAGCGACAGCGAGAGTCCGCGGAAGCATAAGATCATGCTGAACAATTCGAGAACGGAGATCAGAAGCACCCCGGACGAGACGCAGAACGCCTACAATTGTCCGGTATGCGGCAGACAGGACTTCGCGACGAGCGCTCTCCTCGAGGCCCACTTGGAGCGCAATCATCCGGAATTCCCTGCCAAATGCGACTCCTGTAATCTCTCCTTCAAGAATCACCGGGTGTTGAATCTTCATCGCTTTATGATTCATTTCGCCGAGCATCCTGTCGGCAATACCGCGCGAAACTTGCGTAACTCCGTGGTAGGATTCAACGACCTGACCTTCGTTGACTTCTCTTCGGACAAGTTCCCGACGATCGCTAGAGCGATGTGCGAGCAGTCGCTGCATCGACCAGCTTCGGGGGAATTCGCAAAATTCCAATGCGCAAAGTGCCTCCGTGCATTTCCTTGCAGGTCGGCTTTGGACTCGCACGAAATCGATTGCGGTACAACGAACTCTCAAGCTAGAGCCATGGACGATAGGGAGTCGAGAAGAGACGACTTTTTCGCGGGTTTGGATCTGCAAAATAAAGCCGCGCTGACCGAGGCAAAGGATGGAAAGGACTTGGCGGATATACAGAGTATCATATCCGTCACGTCCGGTCCGATATTACAAAACTTTCCTCGTTCGGACGCCAGCACACCAGAGAACAATATCAAATTTAATCCCAACGTCGGTTCCTCTGGCTCGTCCGGGACCTTTTCATCGGAATACCACGAGGAAGAGGCCCAGGACGCGTTCGCAGCGGAGTTCAGGAAGATGAAGCTGAAGGGAGAGTTCCCGTGTCGACTATGCTCGGCGATATTTCCTAATTTACGAGCTTTGAAGGGCCACAATCGGGCTCACATGGGCGTTGGCCCTGGAATGCCCTATCCCTGTAACATGTGTCCCTACACCAGCACGGACAAGGCTACCTTGGTGAGACACTTGAGATCTCATAACGGTGATCGTCCGTACGAGTGTTCCCTATGCAACTACGCCTTCACTACCAAAGCCAATTGTGAAAGACACGTGAGAAATCGTCACGGAAAGCTGACCAGAGAGGACATCAAGAGCGTCTTGATCTATCATCAAAACGAGGACTCCACGAACGAGAATATCGAGAGAACCTCGCCCAGAGTGATGAAGGACGACGCGAGAAAAAGTTTGATTTATCCGAGCGAACGCGAGGATTCTCTGCAGCAACAAATCCATTACCCACCGATAGACACGAAGGGTGACATCCGGGTGATCGACGAGGCTAAGCTACACAGCCCCGGATTGCCTTCTCTTCGTAATATGGCCATGAATTATGAGAAAAACGAGACTTACTCGAGATCGAGCGTACAATCCACCGAACTCATTTCAAGATGCGGCGAAGAGTCAAACAAATCGCACGATCAGATCGGAAGGCCTGATTATTCAAAGGTCGAGGACGATCTCGAATCAAGGTCATCGGACGGAAGCGTGTCTCTAGTCAATGATACCAAATCAGATATGCACCAAAGAATTCAAGCTAGTCCGATGAACTTGAAGAAAACACTGAACGAGCCTTCCGTCGGTAGTCCTGGCGAAGACGGGCCACTTGATCTGAGTATGGATGTTTTAGACCTAAGTAAGAAAGCCAAGGAGAAGGAGGCCGAGTTCGCAGGATCCAACGAGCATTACGCTGGCAAAGATCAAAAAGAATTCTACAATGCCACGAGCCAGCTATTACTAACGCAGGCTCTCCTTAAAGCAGGCCATGGAAATTCACAAGCAACTTCTTTGGAAGCTCTCTACGCAAACGCTCATCTCATTTACCGAAATTTCGGACAATTTTCCGCAGGAGTAGGTGCCGGAATTCTACCTCCCTACTTGTTCAACCCGCACGTTTTCGGACAGGACTTTACTGTAAAGGATAGACTGCAGAAGGAACTAGTTAGGGGCTTACAATTGACCAGCGGTGGTACCCTGGTCGATCCACCTCTAGGAAGCGCCGGATATGCTGCCTTTTCTCAAGCTAGAGACGTGCCTAGTCAGGCAACGAGCGAGCAGaacgattataataaattgttagCCTCGAAAATAGCCAACAAGAGTCTACCGCCACGCGAAAAGCCGGACGTTTCACCTTCGACCAATTCCGTAAAGATGGTGATCAAAAACGGAGTTCTCATGCCAAAGCAAAAACAACGACGGTATCGTACAGAGAGACCTTTCACTTGCGAACATTGTTCAGCAAGATTTACTCTGCGTAGCAACATGGAGCGACACATAAAGCAACAGCATCCTCAACATTGGAGTCAACGACCACGAGGCGGTCACTCGACGAGAGGCAGACCACCGGCGAGTCATCCAACATTGTTACAGAATCTAGGACAGTCCACGTCACAATTACCGCAATCTTATCCCAGCATCCTCCCCAAAGTGGAGACATCATCTACACCGGAATACGGCAAGCACTCGATCTCCGATCAAGTGAAGTACGCGATCTTGGCGCAACAACTGAAGGCAAACAAGATGGACGATAACGACACCGAGGAAGAACTGATCATCGACGAGGATCctaaagataaagaaatgcAGGAATCTCAAGAGCAGGGTGAACGTTGTACCAGTCTGTTGAGAGGACAGTTGGAAGGGAACGAATCTAATAAGGACAGTGTCGTGAAGGAAGAGATGAACACCTCGGAAAAAGATTCTGATACGTCTCACGGTGAACAGACTGCAGAGCATAATGACGCCAATGACGACGGGATCAGTTCGACCAATGAAAAATCTGTCGAAGGGCAGATGGAAGTAGTATCCACTACGGACACTAATTCAAGACACACATTTAAAATGGAAGTATCGAACGATGCGGTGCACGATAAACAGGAAGACAGCACGGCCGATCTTGCCAGCGTCTCGGAATTAATCGACAATGCTTCTCACCAGTACCAGCACTTTCAACCGCAATATCTGAGCGACGAGGAAGGTTTGGTAGCCTCGACCAGCGATTGCAACAATTCCGGTAGCGACGAGAAGTCAGACTCGGTGAACTCGGTTAATTCGATCAACACAtcttcttcgaagaagaaaaagaaaaagaagaagaagaagaagaagaagtctgCCTATTCCATGGCACCCAACAGAGTGATATGTCCTTACTGCGAGAGGCCATTCCCTTGGACGTCATCCTTGAGGAGACACATTCTTACGCACACCGGACAGAAACCATATCAGTGTATTCATTGTTTGCTTTTGTTCACCACCAAGTCCAATTGCGATCGTCATCTTTTAAGAAAACATAAGACCAATCCGAACAAGGTACGACGAATCAGAAATTCTTCGTCACCGGACAGCCAAGTGGTCTCTACGAACAACAACACTTTCTCGATGAGAAACGTGCCAGAAAGACCGTACAAATGCAACCAGTGCCCGAGTTCAACTTTTTCAACGCTAGGCAACTTAAAGAAGCACCGTTCTACCAAACATTCGCGCAAAATGAAATCGAGATCCGACTCGCCGTCCAGCGAGCCTCAAAACAGTGCTCCGGAGTCCTCGAAGCCAAACGATCAGAGCGATTACGAGAGTCGATCGTCCAGTGCTTCGGAGAATGCCGAACAAGCGGTATCTGCACCGGAGACAATGAAGCCGAACCTGAATACTTCACCGTCCACCAATGAAGTTTCACGATCTCGAAGACCTTCTCCAAGATCGTCGCCAGGTCCCAGCGATGTGCCATTCAAGTGTCACCTATGCGACAGCGGGTTCGCTGAACGTCAAGATTGCTTGGAACACATCAAGGTTAATCATAAGAGATCCTACGAGATGCTCGTGGCCAAGGGTGCATTGGATATGGACATCGACGCGGTTGAGGATCAGCAGCAGCCACCTCCTCAACAACACACTAGCGAtggcgaggagaagagaggacgatTTCCGGATTATAGTAACAGGAAGGTGGTCTGCGCATTCTGCATGAGGCGATTCTGGTCCGCCGAGGATCTCCGACGTCACATGAGAACGCACACGGGTGAGAGGCCGTTCTCCTGCGACATCTGCTGCAGGAGATTCACCCTGAAGCACAGCATGCTACGTCATCGTAAGAAGCacgagtcgatcgattcgacgatgtACGTTGGCACCAGCGGAGACGAGGAGAACTCACCGAGCCAGCCACCGACGATAACGCCACGGAGTCAGCAACAGCCGCCAGTTCTAATGGCGACCAACACTAACTCTAGAATTCAAGATAGAATCTCGTTACCAACGGTAGCACCAGTGGCGACTGGTGACGCCGCACCTAGCAGTCTGATGAGATTCAACCCGTACGAAAAGCTGACCACTCTCACCGGTAAACTTACTAACGTAACGCATAATGTAAATTCGGACCTTGCCGAGAACACCGACAACGATCTGATCTCTAATCTCTTGGGGATACGCGATAAGAGCTTCATCGATAAGGTTCTCCAGGCATCACCGGACGACGCAGCGAAATTATTAGGCGTCCAACGTAGTCACGAgtga
Protein Sequence: MDYSPKVTVKSEPDQEQVETQADAASPTSSVDLPESAHPCPACPTILSTTRDLTNHLREHNSPRSTDYGGEEDYCCAVCHKVLSSASSLDRHVLVHSGERPFKCKYCEMAFTTNGNMNRHVKSAHRGGQSPHSCTESEGTSSDSEKPSKRQHIEEYNNNEIAKRTSPDFMGKERSPNNLIAKRKCPDYESDSESPRKHKIMLNNSRTEIRSTPDETQNAYNCPVCGRQDFATSALLEAHLERNHPEFPAKCDSCNLSFKNHRVLNLHRFMIHFAEHPVGNTARNLRNSVVGFNDLTFVDFSSDKFPTIARAMCEQSLHRPASGEFAKFQCAKCLRAFPCRSALDSHEIDCGTTNSQARAMDDRESRRDDFFAGLDLQNKAALTEAKDGKDLADIQSIISVTSGPILQNFPRSDASTPENNIKFNPNVGSSGSSGTFSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHQNEDSTNENIERTSPRVMKDDARKSLIYPSEREDSLQQQIHYPPIDTKGDIRVIDEAKLHSPGLPSLRNMAMNYEKNETYSRSSVQSTELISRCGEESNKSHDQIGRPDYSKVEDDLESRSSDGSVSLVNDTKSDMHQRIQASPMNLKKTLNEPSVGSPGEDGPLDLSMDVLDLSKKAKEKEAEFAGSNEHYAGKDQKEFYNATSQLLLTQALLKAGHGNSQATSLEALYANAHLIYRNFGQFSAGVGAGILPPYLFNPHVFGQDFTVKDRLQKELVRGLQLTSGGTLVDPPLGSAGYAAFSQARDVPSQATSEQNDYNKLLASKIANKSLPPREKPDVSPSTNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPASHPTLLQNLGQSTSQLPQSYPSILPKVETSSTPEYGKHSISDQVKYAILAQQLKANKMDDNDTEEELIIDEDPKDKEMQESQEQGERCTSLLRGQLEGNESNKDSVVKEEMNTSEKDSDTSHGEQTAEHNDANDDGISSTNEKSVEGQMEVVSTTDTNSRHTFKMEVSNDAVHDKQEDSTADLASVSELIDNASHQYQHFQPQYLSDEEGLVASTSDCNNSGSDEKSDSVNSVNSINTSSSKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIHCLLLFTTKSNCDRHLLRKHKTNPNKVRRIRNSSSPDSQVVSTNNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSRKMKSRSDSPSSEPQNSAPESSKPNDQSDYESRSSSASENAEQAVSAPETMKPNLNTSPSTNEVSRSRRPSPRSSPGPSDVPFKCHLCDSGFAERQDCLEHIKVNHKRSYEMLVAKGALDMDIDAVEDQQQPPPQQHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPSQPPTITPRSQQQPPVLMATNTNSRIQDRISLPTVAPVATGDAAPSSLMRFNPYEKLTTLTGKLTNVTHNVNSDLAENTDNDLISNLLGIRDKSFIDKVLQASPDDAAKLLGVQRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -