Basic Information

Insect: Odynerus spinipes
Gene Symbol: -
Assembly: GCA_032403825.1
Location: JAIFRP010000030.1:237636-240178[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00082 0.052 13.8 1.5 1 23 75 97 75 97 0.97

2 13 8.8e-05 0.0056 16.8 0.2 1 23 115 137 115 137 0.98

3 13 0.0059 0.38 11.1 2.1 1 23 144 167 144 167 0.97

4 13 1.1e-05 0.00068 19.7 1.4 1 23 173 195 173 195 0.98

5 13 3.3 2.1e+02 2.5 2.3 2 23 360 382 359 382 0.76

6 13 0.00021 0.013 15.7 6.5 1 23 388 411 388 411 0.96

7 13 0.83 52 4.3 6.2 1 23 417 440 417 440 0.95

8 13 8.6e-05 0.0054 16.9 1.2 1 23 446 468 446 468 0.96

9 13 1.5 97 3.5 2.0 2 21 474 493 473 496 0.79

10 13 9.3e-05 0.0059 16.8 1.3 1 23 503 525 503 525 0.99

11 13 8.4e-07 5.3e-05 23.2 0.3 1 23 529 551 529 551 0.98

12 13 0.00043 0.027 14.7 3.4 1 23 557 579 557 579 0.97

13 13 1.3e-05 0.00082 19.5 0.2 1 23 585 608 585 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00082	0.052	13.8	1.5	1	23	75	97	75	97	0.97
2	13	8.8e-05	0.0056	16.8	0.2	1	23	115	137	115	137	0.98
3	13	0.0059	0.38	11.1	2.1	1	23	144	167	144	167	0.97
4	13	1.1e-05	0.00068	19.7	1.4	1	23	173	195	173	195	0.98
5	13	3.3	2.1e+02	2.5	2.3	2	23	360	382	359	382	0.76
6	13	0.00021	0.013	15.7	6.5	1	23	388	411	388	411	0.96
7	13	0.83	52	4.3	6.2	1	23	417	440	417	440	0.95
8	13	8.6e-05	0.0054	16.9	1.2	1	23	446	468	446	468	0.96
9	13	1.5	97	3.5	2.0	2	21	474	493	473	496	0.79
10	13	9.3e-05	0.0059	16.8	1.3	1	23	503	525	503	525	0.99
11	13	8.4e-07	5.3e-05	23.2	0.3	1	23	529	551	529	551	0.98
12	13	0.00043	0.027	14.7	3.4	1	23	557	579	557	579	0.97
13	13	1.3e-05	0.00082	19.5	0.2	1	23	585	608	585	608	0.97

Sequence Information

Coding Sequence: ATGACGCAAGATCCGCTCAAGCAAACATATCTTGTGGTAAGGGCAAGTAATCAGTACTTTCTTCTACCAATGATATCGAATCATCtaattacgaaagaagatCAAATTTCGACGAATAAGCAACTGGACGCGGAAGAAGCCGACGTGCAAATACAAATTGAACCCTCCGACGAGTATATTGTTCCGGATACACCAAATCTGGAAAACAATATCGCCGATGTGTTCATGTGTCACGTGTGTAGCAAAGTTTTTTACACCGGCCTAAGCCTGCAGCTTCACATCGATAAACATAGTGTTGTGAAAAGTGATGTGCACAGTGATGACCATGGTAACCTGCACAATTATGAGTGTTCAGTTTGCGGTCGTTTGTTCGCAATAAAAAAAGCTTTAAAATTACACATGGAGAAACATCAGAATGTCAAAAACATGTATTATTGTACAGATTGTGGGTTCAGGTCAACAGCGCAATTCAACGTGACGAGACATCGACTGAGAAAACacgcgaatatttttcgattccCTTGTCCATACTGCTCCAAGAAATACAATCTCAGAAACGATCTTAATAAGCACATGCTCAAGCATGCTAACgtaattgaaaagaaagatgTTACACAATCTAAAGCGTTATTCATAAAAGATAATACGAACGATTCTGATCAGAGCGCTTACCCTAATGACGATATCAGtgagaagaagatggaggaacCTAAACCCAATTACAAAGATGTTATACAATCTGAAGTGTTGATAGAAGAGGATACGAAAGATTGTGATCAGAATACTTGTCCTAATGACATTACCCATGAGACGATAGAGGAATCTAAATTGCCTAAGCTTAAGAATTGGAAACGAGAAATCTTTATaagaagcgaggaagaaaggaagaatatatacgcgtataaatGTTTACAATGTAAATGGTCGAATCAAGAAGATAAAGTTACAATGAAGGAGCAAATAAACAGGGAAGTCACGATGGATGTGCCGATACTAAAAGTGTATTCTGGGAAAGCTACACCGCTGAAAAAAttgacaagaaaaaaagaaggcttaaaaatgaaaaaggaagcaGTTTCTTGCGAAGTTTGCAAGGAATCATTCAACATGACAGGATCGGAATATCGAAAACACCTGTTGAGCCATGGCAAGTTTCGTACTTTCCCATGCGACGTGTGTTCTAAAAAGTTCAAACACAAACACAATATGCAGAGACACAAATCCAAAGTACACGGGGAGGCACCGATTTACACCTGTCAATACTGTGATTTTACTACGTTACATTGCTCGTATCTACAGGTACACGTCACGCGAAAGCACACCAATGATTTTCACTACCTGTGTGACAAATGTGATCGAAAATTCCGAATCAAAGCTGATTACACCAAACACTTGATAACCCATGAAAAGGAGACCTGCATCTGCAACATTTGTGGTACGTCCTTGCCGAACAAGTTGTCCTTGTATTTTCACAAGAACTACAAgcataaaatgaaagattcgAACTATCAGTGCCCCATATGCAAGAGGAAGCTTCAGTCTCAAAAGAACTTGGACAGTCATCTGCGGCAACACGAGCAACGGTACATTTGCGAGGAATGTGGGATGGAGTTAACACGAAGAAGTGCTTTAAAGAGACACATCAAGACTCACTCTGGCGAGAAACCATACGTTTGTCACATTTGTAACAAATCGTTTACAAGTACAACGGGTAGGAAGATTCATTTCTTGACTCACTCGGGAGTCAGGCCTTACGTTTGCACAATTTGTGGGCAAAGTTTCATACAGCGTCCAGCATTGTCAGTTcattggaaaaagaaacatccTGGTTGCTCCGAGGCTCCGCCATCAGTCTCTATAAAGGACATCATCAAAACTATTGCAGGAAAcacaaaaaatgtatag
Protein Sequence: MTQDPLKQTYLVVRASNQYFLLPMISNHLITKEDQISTNKQLDAEEADVQIQIEPSDEYIVPDTPNLENNIADVFMCHVCSKVFYTGLSLQLHIDKHSVVKSDVHSDDHGNLHNYECSVCGRLFAIKKALKLHMEKHQNVKNMYYCTDCGFRSTAQFNVTRHRLRKHANIFRFPCPYCSKKYNLRNDLNKHMLKHANVIEKKDVTQSKALFIKDNTNDSDQSAYPNDDISEKKMEEPKPNYKDVIQSEVLIEEDTKDCDQNTCPNDITHETIEESKLPKLKNWKREIFIRSEEERKNIYAYKCLQCKWSNQEDKVTMKEQINREVTMDVPILKVYSGKATPLKKLTRKKEGLKMKKEAVSCEVCKESFNMTGSEYRKHLLSHGKFRTFPCDVCSKKFKHKHNMQRHKSKVHGEAPIYTCQYCDFTTLHCSYLQVHVTRKHTNDFHYLCDKCDRKFRIKADYTKHLITHEKETCICNICGTSLPNKLSLYFHKNYKHKMKDSNYQCPICKRKLQSQKNLDSHLRQHEQRYICEECGMELTRRSALKRHIKTHSGEKPYVCHICNKSFTSTTGRKIHFLTHSGVRPYVCTICGQSFIQRPALSVHWKKKHPGCSEAPPSVSIKDIIKTIAGNTKNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -