Ospi000108.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- -
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000002.1:220354-228097[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.1e-06 0.00045 20.3 1.0 1 23 225 247 225 247 0.98 2 31 0.0031 0.2 12.0 1.9 1 23 270 293 270 293 0.96 3 31 0.00015 0.0097 16.1 0.5 2 23 300 322 299 322 0.96 4 31 0.0045 0.29 11.5 0.7 2 21 343 362 342 363 0.92 5 31 0.0075 0.47 10.8 0.1 2 23 462 483 461 483 0.95 6 31 0.0043 0.27 11.5 0.4 1 23 489 512 489 512 0.91 7 31 0.00014 0.0085 16.3 0.1 1 23 583 606 583 606 0.96 8 31 0.011 0.72 10.2 0.7 1 23 612 635 612 635 0.96 9 31 0.071 4.5 7.7 0.8 1 23 648 670 648 670 0.97 10 31 2.9e-05 0.0018 18.4 0.6 3 23 715 736 713 736 0.96 11 31 0.0046 0.29 11.4 0.9 2 23 799 822 798 822 0.95 12 31 3.6 2.3e+02 2.3 0.0 2 23 831 853 831 853 0.84 13 31 0.056 3.5 8.0 0.1 2 23 860 882 859 882 0.95 14 31 1.5e-05 0.00094 19.3 1.2 1 23 890 912 890 912 0.98 15 31 0.9 57 4.2 0.5 3 23 946 968 944 968 0.85 16 31 0.00024 0.015 15.5 3.3 1 23 971 994 971 994 0.97 17 31 0.00052 0.033 14.4 0.2 2 23 1001 1023 1000 1023 0.95 18 31 0.001 0.066 13.5 3.9 1 21 1050 1070 1050 1071 0.95 19 31 0.0031 0.19 12.0 1.8 2 23 1085 1106 1084 1107 0.93 20 31 0.5 32 5.0 1.4 1 23 1110 1133 1110 1133 0.94 21 31 0.013 0.82 10.0 1.1 2 23 1140 1163 1139 1163 0.91 22 31 3.5 2.2e+02 2.4 0.2 2 23 1171 1193 1171 1193 0.94 23 31 4.1 2.6e+02 2.1 0.0 2 23 1200 1222 1199 1222 0.87 24 31 0.26 16 5.9 2.7 2 23 1231 1253 1231 1253 0.96 25 31 2.8 1.8e+02 2.7 0.4 2 23 1259 1281 1259 1281 0.91 26 31 0.066 4.2 7.8 0.6 1 23 1343 1366 1343 1366 0.95 27 31 0.0015 0.093 13.0 3.1 1 21 1394 1414 1394 1415 0.95 28 31 0.57 36 4.9 1.3 2 23 1516 1538 1515 1538 0.93 29 31 1.2 78 3.8 1.1 2 23 1545 1567 1544 1567 0.94 30 31 0.79 50 4.4 2.5 1 23 1578 1600 1578 1600 0.97 31 31 0.52 33 5.0 0.2 3 21 1609 1627 1607 1628 0.95
Sequence Information
- Coding Sequence
- ATGGAGTCAAGGGAACGTTATCACGAGCTGTGCCGATTGTGTGCATCTTACGACGCCGTCAAGATGGATATTTTCGGGCAGGAAGGGAAAAACCGACAACTCGTCGACAAAATTCAGACCTGTCTGCCGTTCAAGATCACAGAAAATGATCGCCTTCCAAAGTGTTTATGTTATCGCTGTATGTACAACCTGGAGAATTTCTATGACTTCAGGACAGCGTGCGTCAATGCGGTGGCATTGCTGGAAAGATGTTTACCACCGAGCGAATCtGCGAACGACAGGGACAAAAGCAGTTGTATACACTATACAAATGTGCACTCAGAATATctgaaggaaaaggaaaacataCCTATACTTATACCTGAGGCTCCTATCGTAAATCCTAATGCAGCTCTGGGTACACCACCCAGATTAAATTCAGATGGGGAAGCAGATCACGAGATAGAAGAAATTCTTGACAACAGTGGCACAGACGAAGagGCAACAGTAGTAGACGATTCAGAAGATAGAAAATCTGATGAATATGAAATGGATATGGAAACAAATCCGAGTGATTTCTTAGAAATGACACCAATGGTAaccgaagaaaatgaagaaccTAGTTCAAAAAGTATGCCTGTGGCGACGCAAGAAACTACAGTTTTTCAACATACGTCGGAGCAGCATGAAGTGTATGTTTGTTCGTTATGTAACAAGGCGTTCAGTTCAAAAGGACATTTGTCTCTTCACGCGAGAATTCATGTGGGTGCAGGTGATGTAATTGGTGAAAAAGTTATCACCGATGATCATACATCTTACAAACGGCCTTATCAATGTGATCTTTGTAACAAATCTTATTCTACGGCCAAACATCGATGGGGACACGTCTCCACGACGCACagAGGGCATCCTGCAGTAACATGTGGATATTGTTCACGCATTTACTCAACGCGAACGAATCTTGAAGAGCATATAAAATCGCGACATGCAGGCTTGCCAGCACCTTCTGAACTACCAAATCCCCTCTTTCGATCCGAAACCAAATGTTACTGTAAAACATGTTCCAAAGTGTTCACAAGTATAGCTGATTTGAATATACATAGTCGAATATGTATTGGAGAGCAGCAAGCAGAGTTGAAAGTGCGACCAGATATCAAAAGTGAACCACAGAACAACAAAAGTCTGATCGATACTTCTGATATATCAAGTATAGATACAGACGACGAACACAAGGGATTCAAAAGTGCAGAAGCAAAATTGGCTAAAAATCCACAGCTTACGATACTTAAGCAGGCACTGACAAAGGgggataatttaaaaagagacTTGGATGATAAAACCAGAGCAAACTGTAGTCCACAGAAAGTAGCCAAAACAGATAGCTGTGAAATCCAGAAAAGGTGGTACTGCGAAGCATGTCCTCAAAGTTTTACGTCAGTGGAAAGTCTTAAAGAACATGAGAGCACACACGATGCAGACAAACCTTACATTTGTATATTGTGTAAAAAAGACTTTACTTTAAAATCATCACTCAGCAGACATATCTTAGTATTACACGGTGTAGATCCATGTCCTTTTATAGATAGTGATAAGTGTTTAAAAAGAGTAGTTCTTTCGCAATCGTGGGGTCAACAGATACCGATACCTTCATCCGATCAGAGAGATACAAAGGAATCCTTGGAGTTTTCTTTGTCTCCCGAAAATttagaaaacgaagacgaagatcCAGAAAGTAATCATGAAAATatgatagagatagagaccGTATTTGTATGCGAAATATGTACGAGAGACTTTAATGATAGAGCATCATTATGGCTACATATACGTGCGACACATAAAGAATGTGCTGCTTTCGCTTGTGGagtatgtttaaaaatatgttctgACAATACACAACTCCTAAATCATGTTAATATGTATCATGGAGGATCGAAGTTACTAGTATCGGAGCAAAGAAGGTATAGCTGCACAATATGCGGTAGACAGCATGATTCGCGAAAGAAGTTGATAGCTCACGTGTCAATACACAATGTAGATCCTGCTTACGATCCTGCGAATTTTGTACAGTTAAacagtaattattataacgaaaCATTAAATGGTAACGAAGGAACTGAACACATGATGGAATTCGACGGagacgagggagaaaaaatagactgttatatttgttataaatcatTTCCAAACGAGGATCATCTTATACGCCATCAAAGAAATGCTCATAAgtctGAACAAATGGCTCCAATGGCAGATGCTCTTGGTAACGGAAATCCTGCGAATATGAATGGTACTGGTAATAGAGCACAGTATCACTTATTTTTTGTGTGCGAGCTGTGTGGTAGCTCACATCCTAGTAAATGGGAGCGTTGGTTACACGTTAGTAGTACCCATAGTAATGAGCCATCTATCAAGTGCGAACGGGATGATTGCGGGAAAATATTTGCCACGAAATCACTTCGCAACGAACACGTTCAGCATCACTTGATCCAAGGTGCTTCGCCAAACACTTGCGAGATCTGCGGTAAATTATGGGGTAGTCGAGTTGATTATTGGAAACATGTAATGGGAGTACATTCCGATACAGTGCCACTCATATGCGGTGTTTGTCTGAAAGTATTTCCAGATGTGTTACAACTTAGTACACATGTCAAAACTAAACACTGGCCACTGACCAATGGTGACTTCAGTTGCGACATATGTGGAAGGCCCTATTCCAATAAATCGAAAATGTCCAGACACAGGAAAATTCATGGATTGGAAGCCGACGGTTACGATAACAGCAGCATCAATGAAACTTTGAACGAATCGTCCAAGTTCGAGCACAGTTTACCACCAGAAATGGATTTGACTTGTGAATTGTGTGCCGATATGAAATTTTCCAACCTAGAGGGCTTGTGTAGTCACAGACGCATCGTACACGGTCTGTTCCCGTGTGATCTTTGTAACAAGTGTTATGGCAGAACTTCTCATTTGTGGAAACACGTAAATCGGGTACACAAGGGTCACGTGGATATAACTTGTCCTTATTGTTTAAAAACCAGTGCGTCGAAAGACCATTTAGCGGCACACATCGCGAAGATACACAGGTACGAGCCGGAAGTCAggaaggataataaaaattcagtaAATTTCAAATCCTCCAACGTGGAAGACGGGGTTCTGCATTACTGTGAGAAATGTAATAAAGGATTTCACAAGCGGTACTTACTTAGACGTCACATGAAAGGTTGCCAGAATTATCGAAAGGATCCTGGGGCGTTGTTAACTCGTTGCCGCGCTTGCGAAAGAATATTCAAAGATCGCGCGAGTCTTCAGAAGCATATAGAGAATCATCATAGTACGTACACTTGTCATTTGTGTAACGAAACGATCACGTCCAAGTTAGGAATCATGACTCACAATCGAGTAAAGCATATGGATCACCCAGATCTGACCTGTGACTACGTCAGTTGCAAAAAGTTGTTCAGGACAAAGGAAGATTTGGAGACGCATAGAAAGGACCACAAGTATCACATAACTCCAAACGTTTGTGACTTCTGCGGTGATACCGTAGAGAACAaacttaaattaaaaatgcacGTGCTATCGTTGCATCGAAATGAAATCGGCGTATCTTGCGGAGTTTGCTTGATACCCATGAAGGATCCTAAAGATTTGAAGAAACACGTCGAGGATGTGCACGAGAGTGTCCTATCCAAACCGAACACGTGTCAAGTATGCGGGAAACAGTATGCGTCCAAGTGGAAAGCTTTCGACCACACGAAGAAATGCCATGGGAAAGTGTTCAGAACGTGCAAACAATGCTTGGCAGTTTTTACGAATGACGCGGATATCAGAGATCACTACGAGCATATTCATAACGTCCCGAAAGATCAGTTAGCAGCGTTCGAATATCGTATGGACATTGGACCAAAGGTGGACGAGTACGGTGTACCGACAGACATCGTAGTTAAAGAAGAGCCAGACGATCTAGACTTCGACGAAGACTTGTGCGAGGACGACTTGAACGATTCTAAACGCAGAAGATCGTTAACCGACACCTACGATTGTGAGATGTGTCCAGAAATTTTCTTAACTTGCGATACACTGGCGAAACATTATCAAAACGTTCACAACACCGATCCCATCCGTATGTTCAAGAAGATAAAGCAAGACGGTGGTAATGGTAAACGTAAAATGAGGAATAGGAAGAACTTCGAGTGTAAAAATTGCAAGAAACAATTTTGCACAAAAACTTTGTTCTGGAATCACATAAACATATGCACGAGACGTAACGCGTACAACAGATTGGATGTACAAAACATTATACCCACGTCGATCTTGGAGACTCACTTGAAGAATAATAATcagataaagaaggaagaaagcgcGTCGTTTATAAACGAATCGAATCTAAACATTCCAgactttaatttattcgaggatattaatttacaattatcaGGGCAAAAACCGGTACCAAATCTCATGCCGTTATCGCACGTAAAACCACCGTCCACGGTAAAATGTTCTAGAAAAGATTCTCGGAAGGTATATGACGAATCAACAAATACCGAATGCGCGTGCGAGGTTTGTGGTAAACAATGGCCAGCTAAAAAGCATCTCTGGCAACATCTCATCCGTTTTCATCGAGCAGAGGCAGCTGTAACGTGTGGCGTTTGTTTGAAATTATGCAAAACTTACCAGGACTTATCGGATCATTTAAAAGCTACTCATGCTGCTATACTATCTTGCGAAGGGAATAATTTCACTTGTAAAACGTGTGGCCGGTATCACAATGCCagaagtaaattattattgcacATGAGTATTCATATCAATTACGTTGGGAACTTTTGGTGTCAGAAGTGTCAGCAGAACTTTGAGAGCGAAGCTAAATTTTCTGAACATATGTTAGAATGTAACAAGCAAGTAGAATCGGAGAGACGACATTTAGAGGATAATATAAAGAACGAGCAAGATGAGAAGGGTAGTTTGATAGGTGACGAGACTTCGATagtggaggaagaggtggaagaagTCGAAGACTTTGAATCCGAGGCAGAGGAGGATGCTGCTACACACGAGGACACTAATAGCGATAATTCGGAAAACTCGGAAGATTCTGATAGCGGTAGTAACACCAGCACGAGCGACGAGGAAGttgaggaagaaaacgagtcCGAAGCTGAGTCCAGACCCAACAGTAGAGCAATGAGAGAAGTTTCCTGCAATTCTGATAGCGATGACACCGATACGGATCATTCGGACCAAGGCGTTATTGAGAATAAATCTCTGAACGATATGAATTGCTTCAGGATGTgcaacgaagagaaagagagaagtatgtctatgaaacaaaatttagaGGAGCGGATGATGAACGAAGAAACCGTCGAGGAAAGTAAAGAAGTTGATCATGAAGAGCAACAGGAGTTGGATTTGAAGGAGATGCATGCCACAAAATTAAACAATCTTCACGTCGAGGAATCAGTCGAAGAAGCAAGAAGCGATTTAGATTTTTCCGACGACGATGGTCCGCCAGTTTTGAGTCCCATCATGCCATTACTGGAACATGGCTCGGAACAACACAACAGTCCGATAGACGACATGAGACACAAACTCAGTCCAATGGTACCATTGGCGATACACGCGGAGAAAGAGCTGGAAATGTGTGAATTATCCGAAAACGGTAACGACGGTGAAAGAGGCACCACATCCTCCATGTCTAATCCTATACATTATTACGAGCACGCCGATAACGACAAAGACATGAACGCCAATGCGTCTGCTCATAATTTAGAATACGGATGCGATGATTTTGAAAATAGTAGAAtggacaacgacgaggaagatAGTATGTCGGATAACGACGAAGGACAGAtggagatagaggaagaaaatgttgaTTGTAATTCTGTGAATAGATTTGAGAAGTTAGAAATTAGCGAATGTATGAACGATTCCGAGGTAGATTCCTACGAGGAAAATTTAGAGGATGAGATGAAATTCGATAACGAAACTAGGGACAACGATGTACAAATTCATAATTTGGATGGTGCGGTTTTGATGGTGGCTAACGATGCCGACGGTAATCAGATCTTGATTCAGCAAAATGTATTGACTATAGGGAACGAGGACTCTAATACAGGAGCAACGGAATATATTTATCAAGAAAGCAACGAGTACGACATAGAAGAGTATGCGATAGCACGACACGAGACAAATTCTACGATACAGTCCGATGATATTCAAGAAATGACGTACGTTCAGGAGATATCCGAAAATGAAGATAGTATCGAGGAGGTAGAAATTAGTGATATGCAAGAGCAAAGTATGAGTGCCAAAAGCAAACAATCTAGCTTGTAA
- Protein Sequence
- MESRERYHELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKITENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPSESANDRDKSSCIHYTNVHSEYLKEKENIPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEILDNSGTDEEATVVDDSEDRKSDEYEMDMETNPSDFLEMTPMVTEENEEPSSKSMPVATQETTVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPSELPNPLFRSETKCYCKTCSKVFTSIADLNIHSRICIGEQQAELKVRPDIKSEPQNNKSLIDTSDISSIDTDDEHKGFKSAEAKLAKNPQLTILKQALTKGDNLKRDLDDKTRANCSPQKVAKTDSCEIQKRWYCEACPQSFTSVESLKEHESTHDADKPYICILCKKDFTLKSSLSRHILVLHGVDPCPFIDSDKCLKRVVLSQSWGQQIPIPSSDQRDTKESLEFSLSPENLENEDEDPESNHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNTQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPAYDPANFVQLNSNYYNETLNGNEGTEHMMEFDGDEGEKIDCYICYKSFPNEDHLIRHQRNAHKSEQMAPMADALGNGNPANMNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSTHSNEPSIKCERDDCGKIFATKSLRNEHVQHHLIQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLQLSTHVKTKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEADGYDNSSINETLNESSKFEHSLPPEMDLTCELCADMKFSNLEGLCSHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHVDITCPYCLKTSASKDHLAAHIAKIHRYEPEVRKDNKNSVNFKSSNVEDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCDYVSCKKLFRTKEDLETHRKDHKYHITPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTNDADIRDHYEHIHNVPKDQLAAFEYRMDIGPKVDEYGVPTDIVVKEEPDDLDFDEDLCEDDLNDSKRRRSLTDTYDCEMCPEIFLTCDTLAKHYQNVHNTDPIRMFKKIKQDGGNGKRKMRNRKNFECKNCKKQFCTKTLFWNHINICTRRNAYNRLDVQNIIPTSILETHLKNNNQIKKEESASFINESNLNIPDFNLFEDINLQLSGQKPVPNLMPLSHVKPPSTVKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKTYQDLSDHLKATHAAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINYVGNFWCQKCQQNFESEAKFSEHMLECNKQVESERRHLEDNIKNEQDEKGSLIGDETSIVEEEVEEVEDFESEAEEDAATHEDTNSDNSENSEDSDSGSNTSTSDEEVEEENESEAESRPNSRAMREVSCNSDSDDTDTDHSDQGVIENKSLNDMNCFRMCNEEKERSMSMKQNLEERMMNEETVEESKEVDHEEQQELDLKEMHATKLNNLHVEESVEEARSDLDFSDDDGPPVLSPIMPLLEHGSEQHNSPIDDMRHKLSPMVPLAIHAEKELEMCELSENGNDGERGTTSSMSNPIHYYEHADNDKDMNANASAHNLEYGCDDFENSRMDNDEEDSMSDNDEGQMEIEEENVDCNSVNRFEKLEISECMNDSEVDSYEENLEDEMKFDNETRDNDVQIHNLDGAVLMVANDADGNQILIQQNVLTIGNEDSNTGATEYIYQESNEYDIEEYAIARHETNSTIQSDDIQEMTYVQEISENEDSIEEVEISDMQEQSMSAKSKQSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -