Basic Information

Gene Symbol
RERE
Assembly
GCA_032403825.1
Location
JAIFRP010000011.1:1366529-1373925[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-08 2.7e-05 23.9 0.2 2 45 129 173 128 174 0.88
2 2 6.9 4.9e+03 -2.5 0.0 25 36 717 728 716 729 0.88

Sequence Information

Coding Sequence
ATGTCTGCCGGGACCCAGGGCGAGATTCGAGTTGGTCCTTCACACCAGGAATTGGTTTCTTGTCAGGCCCGTTTGCCTGAGTATCGGCCGGGTATCCCTCCTGGAGAGCTGCTTCCTGACCCAGAGTTctccaaagagagagaagagctaAGATGGATTCCAGCCATGGCATTGGATGGAGATCTACTCATGTATTTGAGAGCAGCACGATCCATGGCTGCATTTGCTGGAATGTGTGACGGAGGATCTCCAGATGATGGTTGTGTTGCAGCTTCCCGAGACGATACTACTATCAATGCTTTGGATATCTTACATGATTCTGGATATGACCCTGGAAGAGCACTGCAAGCTTTGGTTAAATGTCCTGTACCCAAAGGCATCGATAAGAAATGGTCTGAAGAAGAAActaAACGGTTTGTCAAAGGTCTTCGGCAATTTGGGAAGAACTTCTCGCGTATTAGAAAGGATCTTTTACCTCATAAAGATACGCCGGAATTggttgaattttattatctttggAAGAAAACGCCAGGTGCAAATAACAATCGACCTCATCGTAGACGGCGACAAGGTTCTTTGCGAAGAATCCGAAATACGCGTAATTCTAGAGCAGGCACTCCTAAAGAGGAAGTACCTACGCCACCGAAAGATACACCACCCACTAATGTCAATGCAAAAGAACCTGCTTCAGAATCAGAAACTGTACCAGTTGGCACACCAGCAAGTAATAATCCTGGAGGAGAGATTAGTTCTGTAACAGAAGACGATAACTCTGAAGAGGACAGTGATTCTCGCGATACTAATACAAACGGTGCAACGCATTCTTGTCAACATTGCTTCTCTACTAATTCCAAGGATTATCAGGTTGCTGGTAAAGATAGATTATTACTTTGTACGGAATGCAGAGCACATTTAAAGAAAACGGGAGAATTACCGCCCGCACCTCCCTATTTGTTCCGCCCTGTACCTGCGGAGTCACCAGATAGCCCAGGTAGAATGCGAACAAGAAATAAGGCAAAAGAAACGCCAAGACCAGCGCGACCACGACGTACCGGTGGAACAGACACGCCTGATCAAGAaaagcaacaacagcagcagacGCCCgataaaagtaagaagaagtcTTCTAGCAAACCAGAAACGCCAAAGAAAGCTCAGAAACGAACGCAGGCGGATGATGCAGAGGAGGATAAGGAAGCTCAAAAACGAAAGCGTGGAGATCGTCCAGAGAGTCCTTCAGAATCACTCACTACTGATAGTAATTCTCTAATGGATGAACctgagagagaaacagaaggagATACGAATGAAAATCAACCCACACCGATTACTGTACAGCCCGAAGAACCTGTAAGTCCAGCTGTTACTACTCCAGAAGAACCTTCTGAACCTACACCAACGTCTACACCTGTGCCCGGTTCTATACAGAGTTTACCTATATCTGTTCCTGTTATTCATACATTGGATAAAAAACCTTTATTGGAAGAATCAGTGGAAACAAAAGAGCAAATAGAAGATGTACCTTTAGCTATGAATCAACCACTGAAATTAGAGCCATTACCAATTGAAACAGCTATGTCACCTTCAAACGAGGAAATGAAAGAACCGGAACAATTAAATTTGAGTGCATCACAGTCACTAAATATGAGTGACATGAATCAAAGCATACCTCGGAACTTATCTCAAACGATGTCGAGTGCGAGTATGTGTCCACCAAATAGTTCGCAAAGTATTCAAAACACACAAATCATATCACCTAATCAGCAAGGATTGCCACTTAATATGCAATACGCGTCTAACGTTCCACCAGTTCAAAATGTGCCACAGAATTTATCTCAAAATATGCAAATGCCACCAAATATACCACAGAATATGTCTAATGCTCAGAATATGGGACCAACACAAAATCTTCGTGCACATTCTGAAAATATGTCGAATACTCAAGGTTTGCCACAAAATATTGCAGGACCTCCATTGAATCTCAATATATCCCAAAGTATACCAACAAATATATCTCAAATGCCTCAAATCTCAAGCTCACCACAGCCACTTGGGTTAACTGTCATGTCGTCCGAAAATAGAATGTCCGAAAGAATTCCAGAGGAGAGGTTGTCCACAGAACGAATGCGCGATGGTAGAATTTCTGATAGAATATCTGAAAGAGTACCTGAGCGTACTGAAAATAATGAACCCGAGAGAACTGAACCTGCGAACATGTTTCAACCGATTCAACCAAGTGGGATTTTATCTATGGAAAAATCTTCGAGTATCTATAGTTTGGCTGGAACTCCGCCGATGGAACCGCAAAACTTAAAGATAAAACAAGAGATTATTCCACCTGAACCGGATCCATTACAAAGCCTGAAAGAAGTGAAAGTTCCTGGTTTCCAGACTGGTTTCCCAGGGCCCAGTTTGgagaatataaagaaagatcCAGACAGTACTAGTAAACCACCTACACCAAGCAAACATTCTCTGCCGAGCAATCAACCCGTACCGCAAATTCAATCAGTGGCGGCATCACCGACGCCAACCTTGCCACCTCCACCGACATCAATTCCTCAACCCGTGATGCACCCGGCGCAACAGCCTAGTCCACATATGGCTCATCCGTTCCATCCTCATCATCCCTTGATGCACCATTCGTTATTTACCGCAATGCATCCTTACCATCCACATGCTTATCCCGGATACGCACCCGTTGGCGGGTATCCTTCGTTTCCGCCATATCCGTATGGGCCAGTTCCCCATGCTATTCCACCTCCGTCGCCGCAGAGAAGTCAAGAAAATACAACAATGATGACAGCTCATCACTCTAGTACGAGTTCCAGTGTGACAAccagagaggaaggagaaaatcTCATCGCTACTCATCACCATTCCTCTAGTATGCATCAAGCAACCACTTTACACCACGACAAACTCTTAACCATCTCCTCTCACAGCTCTCACAGTCACTCGTCGTCGCACAGTTCTCATAATACTCAACGTAAACCGTCGCTCGTTTCAGCAACGTGTTTAACGTCGAGTAGTTCcgttcatcatcatcatcgaccTCCTCAACCGCAACCACCCGTTGTACCAGAACCAAAGATGGAACAGGATCTTTGTGAACCAGAACCAGAAGAACCGCCCAGTCCACGTGGACCTTCTCCTGAGCCAAGAATCGAAGATTCCGAATGTCACAGATCGCAATCTGCAATATTCTTACGACATTGGAATCGTGGCGAGAATAACTCGTGCACCAGGACAGATTTGATGTTTAAGCCTGTACCTGATTCTAAATTGGCtagaaagcgagaagaaagatcaAGAAAGCAagcagagagggagagagaggagcgcgACAGAGTTGCCGCACAGCAGGCTAGAAAAATGACAACTCCGGAGAAACAGCCTGAATCTTGTAAACCACCTAGTCGTGGTCCCCTCGAACCCGTCGTATCTCCTTACGATAGGTACGCGACAAGGCCAGGCTCTTATGCGGATACGCCAGCTTTAAGGCAACTCTCTGAATACGCCAGACCACATGCAGCGTTTTCGCCTGCTAGACATCCTGCACCACCGGATCCGATGATCCATTACATGTATGGACCAGCGGCAAGAGAACGTTTAGAATTAGAACACTTGGaacgtgaaaaaagagagcgcgaAATAAGAGAACTACGCGAAAGAGAATTAAATGACCGTTTGAAGGAGGAGCTATTAAAGGGAACACCTAGACCCATGCCAGCGCCTGTCGATCCACATTGGTTGGAAATTCACCGGCGATACGCGGCGGCGGGTCTCGCACCAGGACCGTCGGGACCACCGCAAGCTTTGCATCAATTTGGTTTATATGGAGCTCCGCCTGGGCCGAGTCAACTGGAGCGAGAGCGGCTAGAAAGATTAGGGATACCGACTGCAGCCGGCGGGGGGCCAGCGGGTGGAGGGGCTGGCCATCCCGTAGCGGCTCATCACCATGGCCAGCTGGACGAGCGGTTGGCTCTAGCTGCTGACCCGATGGTCCGGTTGCAGATGGCTGGCATCTCACCCGAGTATCACGCTCACACTCACGCGCATACGCATGCGCATACGCACTTGCACTTACATCCGGGACAACAACAGGCCCAGCAACAGGCTCAGCAACAGCAGGAGGCAGCTGCGGCTGCAGCTGGATTCCCCCTGCCTGCGGCAGCTGGTGCTAATTATCCTCGGCCAGGCTTAATGCCTCGTGATCCAGCATTGGCTCTTCATCCGGCGGAGCTTCTCGGAAGACCGTATGCAGATATGGCAGTACACCACGAACAATTACAGCGTCATCTGATGATGGAACGTGATCGTTTTCCTCCACATGCATCACTTGTGGCCCATCATGAGGAATATCTGAGACAACAGCGTGAGCGCGAGCTTAAAGTACGTGCATTGGAAGAAGCTGCACGTGGATCTCGTCCTTAA
Protein Sequence
MSAGTQGEIRVGPSHQELVSCQARLPEYRPGIPPGELLPDPEFSKEREELRWIPAMALDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVPTPPKDTPPTNVNAKEPASESETVPVGTPASNNPGGEISSVTEDDNSEEDSDSRDTNTNGATHSCQHCFSTNSKDYQVAGKDRLLLCTECRAHLKKTGELPPAPPYLFRPVPAESPDSPGRMRTRNKAKETPRPARPRRTGGTDTPDQEKQQQQQTPDKSKKKSSSKPETPKKAQKRTQADDAEEDKEAQKRKRGDRPESPSESLTTDSNSLMDEPERETEGDTNENQPTPITVQPEEPVSPAVTTPEEPSEPTPTSTPVPGSIQSLPISVPVIHTLDKKPLLEESVETKEQIEDVPLAMNQPLKLEPLPIETAMSPSNEEMKEPEQLNLSASQSLNMSDMNQSIPRNLSQTMSSASMCPPNSSQSIQNTQIISPNQQGLPLNMQYASNVPPVQNVPQNLSQNMQMPPNIPQNMSNAQNMGPTQNLRAHSENMSNTQGLPQNIAGPPLNLNISQSIPTNISQMPQISSSPQPLGLTVMSSENRMSERIPEERLSTERMRDGRISDRISERVPERTENNEPERTEPANMFQPIQPSGILSMEKSSSIYSLAGTPPMEPQNLKIKQEIIPPEPDPLQSLKEVKVPGFQTGFPGPSLENIKKDPDSTSKPPTPSKHSLPSNQPVPQIQSVAASPTPTLPPPPTSIPQPVMHPAQQPSPHMAHPFHPHHPLMHHSLFTAMHPYHPHAYPGYAPVGGYPSFPPYPYGPVPHAIPPPSPQRSQENTTMMTAHHSSTSSSVTTREEGENLIATHHHSSSMHQATTLHHDKLLTISSHSSHSHSSSHSSHNTQRKPSLVSATCLTSSSSVHHHHRPPQPQPPVVPEPKMEQDLCEPEPEEPPSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRVAAQQARKMTTPEKQPESCKPPSRGPLEPVVSPYDRYATRPGSYADTPALRQLSEYARPHAAFSPARHPAPPDPMIHYMYGPAARERLELEHLEREKREREIRELRERELNDRLKEELLKGTPRPMPAPVDPHWLEIHRRYAAAGLAPGPSGPPQALHQFGLYGAPPGPSQLERERLERLGIPTAAGGGPAGGGAGHPVAAHHHGQLDERLALAADPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPGQQQAQQQAQQQQEAAAAAAGFPLPAAAGANYPRPGLMPRDPALALHPAELLGRPYADMAVHHEQLQRHLMMERDRFPPHASLVAHHEEYLRQQRERELKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00633569;
90% Identity
iTF_01232350;
80% Identity
-