Basic Information

Gene Symbol
NCOR1
Assembly
GCA_032403825.1
Location
JAIFRP010000062.1:1472762-1484043[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-08 2e-05 24.4 0.0 3 43 760 800 759 803 0.96

Sequence Information

Coding Sequence
ATGAGGGTAATACGACTGTCGCAGAAACTTGATGCAAAGATTAGCAGTTTGTCGTCAGGTGGTAACGTTAGGCCGACGCAGAATTACGTGAACATCAAGAGCAGCAGCCCGGTATCGCCGAGGACGGCCGGTGCAGGAACAACGTACGTCCAGGGCggtgcagcagcagcatcgtcGGCGGCTGCTGCGACGGGTGGAAGCGGCAGTGCGTCGAGCTCGTCCGCGTCGGCTCCGTCGGCTGGTAGTGGCGGCAGCAGCGGCGTCAGCGGAGGTGGAAGTGTCGGTGGCGGTGGCAGCAGTGGTGCGGGCGGCGCTAATGGCGGCGCGAGTGTTGGAGGAGTGGTGGGAGGAGGAAGCGTCGTCGCGACACCTGGCGGCGGGAGCGGGAACAGCGGGAATGGCGGCGGTGgtaacagcagcaacagcggcGGTAGCGGGAATAACAATGGTGGAGGAAATGTTGTCGTCAGCGGCGGAGGGAGCGGCGGATCCGGGGGTGGTAATAGCGGAAATCCGAATGGTGGTGGGGGTGGTAACGCTGGAAACCAAATCGGCGGGAACATCGGCGGTAACATTGGCAGTAATATCGGTGGTGCACCGACTGGTTACGTAGCCGTACCGGTGCCTGGTGGTTTACGATATATCCATCCATCGTATCCACAAAGCTCCTCGACGGTTCCTGGCTCGGCGGCCGCGgtggcagcggcagcggcggcggcggcggcctCGTCCGTTTCAGCAAGCTCCGTCGCCGCCGTAGCCGCGGTGGCGAATTCTGCCGCCGTGGCAGCTGCCGCggctgccgctgctgccgGTTCCAACCTACCACCCACTTCCGTACCCGCCACCGCCTCTCCCGCCAGTATCAGCCAAACACCACCGCCTCCTGCGGGAACCGGATACGTTACCAGGGATGCCTATCGCGGCGCCACTACGAACGTGAACGAGAGGATCGCTATCAGCGTGAGCAGTAGTCCTCTGTCGCAGGTTGGACTCAACGTTGGTGTAGTCGCTGCTGAGTATGGAGCCGGCGGTAGCATAAACAGCGGGATGGGAAGTGGTAGAGGAGAAAGACCGAGGATGTCCCTGTTGTCATCCGCATCGGTTGCACCCGCACCTTCACCAACAGCGGCGTCGGATTATCAGCACATGCCAGGTGCGAGGAACCCGAGAGTAGGCCTCATACCTGTTCAATCGGATCAGTATTGTACCCGAACTGCCGTCGAGATGGCGACTCTGCAAGAGGCACCGCCGTTCAAAAAGATTCGTCTCAGTCAGCCAACTCAGCTTCAGATACAGTCGCAAGCACAGTCTCGTTGTCAGAGTCTTCCACCGACTGATGTTTGCATCAAGCAAGAACACGTGGTACCCTTGCAGCAGCCACTGAGGATAGACACCAGGGGGCAGCCTGCCACGGGTGCGTATACGCCGCAAACCGAAGCCATTTCACCCACGCTTCCAGAGCCCAATACGCAAGAGGATGCACAATTCAGAAGCACCAAGGACGATCTTTTGCAGCAGATCGGTAAAGTTGATAGAGAGATTGCTAAGAGGGAATCTCAAATTAGTAAGCTTCGGAAAAAGCTCAAGGAGCTGGAGGAGACTGCGAATAAACCTTTGGAGGCGAGTGGTCTTAAGCGGCAAATTGAAGAACAATCGCAGCAACCAAAGCATCAGTCATTGGCGCAGAAAATTTATGCCGATAATAGAAGAAAAGCCGAAGAAGCGCATAGACTTCTAGAAAGATTGGGTCCTAAAGTAGAATTACCGTTGTACAATCAACCGACGGACACCAGCGTGTATCAGGAAAATCGCACAAAACATCAGACGTGTATGAGGGCGAAACTTATAGGAAGGCTTCGAAGGGAGCATGCTGAACGCGCGTCTCTTCACAGACAACAGTCCCAATCTTATGCCGTTCTCGTACAAGAATGGCATCGCAAGGTAGAGCGACTGGAGGCAAcgcagaaaagaaaatcgaaggaggCAAAAAATCGTGAATTCTTCGAGAAGGTATTTCCTGAGTTGAGAAAGcagagagaagataaagaacgCTTCAATAGGGTCGGGGCCCGCATTAAAAGCGAAGCTGATCTCGAAGAAATTATGGATGGTCTTCAAGAGCAAGAGATGGAGGACAAAAAGATGCGTTCGTACGCCGTGATACCACCTCTGCTCTTGGATACGAAACAGCGAAGGATTGCCTTCCAAAATCGAAATGGTTTACTTCAGCCAGAAGAATTAGAAGCCCTGCACagtgaaagaaaattgatcAATGTATGGAGTTCTGTCGAGCACGAACTGTTTAAAGAAAAGTACTTGCAGCATCCAAAGAATTTTGGTGCGATAGCTCAGTCCTTAGAACACAAGTCCGTTCCAGATTGCGTACATCACTACTACCTCACTAAGAAAGctgaaaattataaacagCTTCTGCGGAAGTCTCGGCAACGGACACGCAGTTCCCGTAACAATCCTAACAATAAGGTGAATAATAGCAGCTCTACTATCGGACCGATCGACATTTTGACGACGGGAGTTACCACGAGGCTGCAACGCGAGCAGCAACAGAAGACGCAGGAGAATCCTCAGAATAGTTCAGCAGCAGCTACGACgtcaacaacgacgacgagcaccTCAACATCGAGTATATCGACAGGAActgcgacgtcgtcgtcggctagtacgacgacaacgacggctCAGAGCTCCTCCGTCGCGTTGAATTCGAGCATGTCCACCGATTCgggtacgacgacgacgacgacgacaacgacgacaagcACGATGACGAGTACGACTAGCACgacaacgtcgacgacgagtagCACGTTAACATCCGTGACGATGTCGTCTAGCGTCGCGTCGTCCTCGGCATCGAGTACAAAGGACACCAGGGAATTGAGTAAAGAGAACAAGGAGAACAAAGGGGATAACAAAGATTCGCACGTCGTTAAAATGGAGATAAAAGAGGAATCGCAATCGAGTTCGGAGACAGCATCGAACAAGGACGTCAAAGTCATAATGGAGGGTAAGAACAcactgtcgtcgtcgtcgtcatcctcgttAAATGTCACCAGCACGAATGTACCTGCCATCCAGACCGAGTTCAAGGAaacgggaaagaagaaacaaactTGTCGAGACTCCGCTGGTAGCGGTGGTAACAATGCGGCAGCTACTAGTAGAATaaaggataagaagaaggaaaatcaTGCTACACCGATGGAGACGAGCGACGAGGAGGCACAGTCTATAGACACGATCGGTGAGTACATtgttaaatacaatttttgtacCTACTAA
Protein Sequence
MRVIRLSQKLDAKISSLSSGGNVRPTQNYVNIKSSSPVSPRTAGAGTTYVQGGAAAASSAAAATGGSGSASSSSASAPSAGSGGSSGVSGGGSVGGGGSSGAGGANGGASVGGVVGGGSVVATPGGGSGNSGNGGGGNSSNSGGSGNNNGGGNVVVSGGGSGGSGGGNSGNPNGGGGGNAGNQIGGNIGGNIGSNIGGAPTGYVAVPVPGGLRYIHPSYPQSSSTVPGSAAAVAAAAAAAAASSVSASSVAAVAAVANSAAVAAAAAAAAAGSNLPPTSVPATASPASISQTPPPPAGTGYVTRDAYRGATTNVNERIAISVSSSPLSQVGLNVGVVAAEYGAGGSINSGMGSGRGERPRMSLLSSASVAPAPSPTAASDYQHMPGARNPRVGLIPVQSDQYCTRTAVEMATLQEAPPFKKIRLSQPTQLQIQSQAQSRCQSLPPTDVCIKQEHVVPLQQPLRIDTRGQPATGAYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQIGKVDREIAKRESQISKLRKKLKELEETANKPLEASGLKRQIEEQSQQPKHQSLAQKIYADNRRKAEEAHRLLERLGPKVELPLYNQPTDTSVYQENRTKHQTCMRAKLIGRLRREHAERASLHRQQSQSYAVLVQEWHRKVERLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSSSTIGPIDILTTGVTTRLQREQQQKTQENPQNSSAAATTSTTTTSTSTSSISTGTATSSSASTTTTTAQSSSVALNSSMSTDSGTTTTTTTTTTSTMTSTTSTTTSTTSSTLTSVTMSSSVASSSASSTKDTRELSKENKENKGDNKDSHVVKMEIKEESQSSSETASNKDVKVIMEGKNTLSSSSSSSLNVTSTNVPAIQTEFKETGKKKQTCRDSAGSGGNNAAATSRIKDKKKENHATPMETSDEEAQSIDTIGEYIVKYNFCTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-