Ospi012296.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- -
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010004416.1:58281-62647[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 1.2e-05 24.7 0.0 1 38 15 53 15 57 0.94 2 2 6.5 6.1e+03 -3.2 0.0 33 44 131 142 131 142 0.80
Sequence Information
- Coding Sequence
- ATGCCgcgaaattataaaagaacgaCAAACAGACAATCGTGGAGTGAAGAATCTATGAAAAATGCCATTTTAGATGTAATAGGAGGAAAAAGTGGATATCGCGTCGCTTCTCGGACATTTTCAGTACCACAATCGACCCTGGAAGATAGAGTAAAAAAATACcgaaaaaataacaatgtcGAAGATGCTTCAAAAAAAGGCCTAGGTCGCTTTAAGACAGTTTTTACAGCTGAGCAAGAAAGTTTAATGTGTCAACACATAAAGGATCTTGAAGCTCAATTATTCGGACTAATATACAGGGATTTTCGACATCTTGCTTTTCAAATGGCAAAGAAAAATGGTATAGAccataattttaataaagacACCGAATTAGCTGGAATGGATTGGCTTTATGGATGTTTACGTCGCCATCCAGAGTTATCGTTGCACCTTCCAGAGCCTACTTCCGTTGCAGTACAGCTACAATCAGCTCAAGCGTCACCAATAAATCCACAACCAATCACTCCGAAGCAAACAGCAATTAATACACAACTAAGCACTTCACCGCAATCAGCATCGTCGTGTTTAGCTTTTTCTCCCGCTGATATTTTACCTAAGCCTCATGTTGCAAGAAAAACAACCTCAAATCCTCGTCTAGGCAAAAGTGCTGTTATTACTTCATCACCTTATAAGTCAGAACTTGAAGAAAATAATGCCAAAAAgcaaattaagaaaaaagtgcCAAAACCAAGTGGTGACATATCAAatcctaaaaagaaaaagatttcagACGATATGTGTATTTATTGCACTGAAATATATGATAATACGAAAAGAAGTGATGCTTGGGTGCAATGTCTTCAGTATGTACGAAGTCGAATCAAGCACTTAAAAATGAGCAATCCACCGAACGAGATCAGTAAGGATCGaaacatcgataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgcaTCCTCGCAACGTTAGATATTCCAATTTAG
- Protein Sequence
- MPRNYKRTTNRQSWSEESMKNAILDVIGGKSGYRVASRTFSVPQSTLEDRVKKYRKNNNVEDASKKGLGRFKTVFTAEQESLMCQHIKDLEAQLFGLIYRDFRHLAFQMAKKNGIDHNFNKDTELAGMDWLYGCLRRHPELSLHLPEPTSVAVQLQSAQASPINPQPITPKQTAINTQLSTSPQSASSCLAFSPADILPKPHVARKTTSNPRLGKSAVITSSPYKSELEENNAKKQIKKKVPKPSGDISNPKKKKISDDMCIYCTEIYDNTKRSDAWVQCLQYVRSRIKHLKMSNPPNEISKDRNIDKKKKKKKKKKKTRILATLDIPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -