Ospi003577.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- lola
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000023.1:123655-127060[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 5.6e+03 -3.1 0.1 4 20 102 118 101 120 0.74 2 2 6.3e-09 5.9e-06 25.6 0.1 9 40 398 430 397 435 0.87
Sequence Information
- Coding Sequence
- ATGGAGGATGACCAGCAGTTCTGCCTTAGGTGGAACAATCACCAGAGCACACTCATACAAAATTTCGACACGCTTCTCGAAAGCGGCACGCTGGTCGACTGCACGCTGGCAGCGGAGGGGAAATACCTCAAGGCCCACAAGGTAGTCCTCTCCGCGTGCAGTCCATATTTTGAGGGCCTCCTCAGCGAACACTATGACAAGCATCCTGTCTTCATACTCAAAGATGTTAAGTTTAAAGAATTGAAAGCGATGATGGACTACATGTACAGGGGGGAAGTAAATATCTCCCAAGACCAACTGGCGGCACTCCTTAAAGCTGCCGAGTCACTACAAATTAAGGGCCTTTCGGAAAGTAAAACGAGCGGCAGCAGTAAAACGGAATCGAGGTTAGCTAAGGTCGCACCACAGCCCGTAGTACCACCGTTAGACATTTCGTACGCGTCTTCCGGTCTCACCATAGAAAAGAACAAAGTTCCTAGGCAGGGTATGGCACAAGGTTCCGTAGGGGACCTGCCCGAAGACTCGGCCAGTCCCCAAGTACCTAAGGGGCTCTCCTCGAGAGAGGGCTCGCAAAGTCCAAcatcgaggaaaagaaaaaggtttagaagaagaagcgtcgGTGAAGATAATTCAGTGGAAAACCATGAAGCGTCGAATTCGAGCGACATGCCTCAACAAATGGGCGTGCCAGCGCTTGGAATCGCGCCCGTGGCGGACGAAAAAACGCATGCAGATCCCACAGACTCTCTCGGCAGGTCAGCCTTAATGACGCAGCTGACGAAGCCTGCCGACGAGATGCTTCAGTTGCCACTTGAAAAGCCCGAGCCAAACGATAGTCTCATCGAGCCAAAGTCTGAGTACCTGGAGGACCCGGAGGAAAGCGTCGAAGATCTGACGCTGGACGATGATATGAACGACCTTAACGAAATGGAGCAAGATAATAACAGGGCAGGACCATCCCACGACCCCTCCCAACATCCTGGTGGGGGGGCGGGAGCGCGGTCTCGGTCGAGAGGGAATGTAGGTGTTGGTGGTGGCAGTGGTGGTGCCCCCTGGGCGTCCCATTTCCTCGATTGTAAAAAAGGGCCGAACACGAGACGTCCGCGGCCAGAGGTTGACTTAGGCGCGTTGCTCGACTCGCTGGCTAACAAGCAGGGCAGAAAGTATAGTTTAAACTCGGTTAAAATGTCCCTGGAAGCGATCTTGCAACAGGGCGTTAGCACCACTCAGGCGTCCGAGATGTACGGGATCAATCGGTCGACCCTGCAAttctatttgaaaaaattgaacgtCGTCAGGAGGAGATGGAGACAGCAACCTAACACCCTGGTCCAGCCTAGACAGTCTTAG
- Protein Sequence
- MEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTSGSSKTESRLAKVAPQPVVPPLDISYASSGLTIEKNKVPRQGMAQGSVGDLPEDSASPQVPKGLSSREGSQSPTSRKRKRFRRRSVGEDNSVENHEASNSSDMPQQMGVPALGIAPVADEKTHADPTDSLGRSALMTQLTKPADEMLQLPLEKPEPNDSLIEPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDNNRAGPSHDPSQHPGGGAGARSRSRGNVGVGGGSGGAPWASHFLDCKKGPNTRRPRPEVDLGALLDSLANKQGRKYSLNSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQQPNTLVQPRQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418424;
- 90% Identity
- iTF_01454271;
- 80% Identity
- iTF_01090071;