Ospi009974.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- -
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000831.1:45725-47172[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 1.1e-05 24.8 0.0 1 38 15 53 15 57 0.94 2 2 0.67 6.3e+02 -0.0 0.0 21 31 310 320 303 328 0.78
Sequence Information
- Coding Sequence
- ATGCCgcgaaattataaaagaacgataaaCAGACAACCGTGGAGTGAAGAATCTATGAAAAATGCCATTTTGGATGTAATAGGAGGAAAAAGTGGATATCGCGTCGCTTCTCGAACATTTTCAATACCACAATCGACCCTGGAAGATAGAGTTAAAAAATACcgaaaaaataacaatgtcgaatatgttttaaaaaaaagacctAGACTAACATACAGGGATTTTCGACATCTTGCTTTTCAAATGGCAGAGAAAAATGGTATAGACCACAATTTTAACAAAGACACCGAATTAACTGGAATGGATTGGCTCTATGGATTTTTACGTCGCCATCTAGAATTATCGTTGCGCCTTCCAGAGCCTACTTCCGTTGCACGTGCAATGGGTTTTAACAGAGAAACTGGGATCACGACTTTGCCCAAGAAGAAATCTAAAATCCTTTCTTTAAAAGGCAAGAAACAAGTAGGTCTTGTCTCTTCTGCTGAAAGGGACCAATTGACTACCGCAGGTTTGTGTGTATCAGCTGCAGGTGCTTATGTCCCACcgcttttaatttttccgaGAGTTCGTATGAAGGCTGAATTGTTGGATGGAGCACCTCCTGGAACTATAGCAATATGCCATCCCAGTGGATGGATACAAAGTGATATATTTGTTCATTGGTCAAATCACTTTATTGCAAATGTCAAACCTACTAAAAATGATCCTGTGCTACTTTTGCTAGATGGACACGCAACACACACTAAAAATCTTCCCTTGATAGACAAAGTTCGAGAGAACGGAGTATTCATAGTCAGCTTTCCTCCCCATTGCACCCATCGTTTGCAACCACTTGACGTTAGCGTCATGGGCCCATTAAGCACCTACTACAGTCAAGAAGTGATGACACGGCTGCGTAATAACCCAGGTCGAATTGTTACTACGTTTCATCTTGGAAAGCTATTTGGGATTGCGTACTCTAAAGCAGCAACCCTACATAATGCTATGATTGGTTTTTCAAAAACCGGAATTTGTCCCCTGAACCCGAATATCTTCTCAGATCATGATTTTGTATCTGCTATTACAACGGATAATGACGTTACATCTACTGAGCCCACGACGAACTCTTCTCCGGAAACTCGGGACAATAACATTGTTAACAGCACAAAGGAAAAAGACAATCCTGTACTTGCAGTACAGCTACAATCAGCTCAAGCGTCACCAATAAATCCACAACCAATCACTCCGAAGCAAATAGCAATTAGTCCACAACCAAGCATGTTCTGTAAACTTCGTCGATTATAA
- Protein Sequence
- MPRNYKRTINRQPWSEESMKNAILDVIGGKSGYRVASRTFSIPQSTLEDRVKKYRKNNNVEYVLKKRPRLTYRDFRHLAFQMAEKNGIDHNFNKDTELTGMDWLYGFLRRHLELSLRLPEPTSVARAMGFNRETGITTLPKKKSKILSLKGKKQVGLVSSAERDQLTTAGLCVSAAGAYVPPLLIFPRVRMKAELLDGAPPGTIAICHPSGWIQSDIFVHWSNHFIANVKPTKNDPVLLLLDGHATHTKNLPLIDKVRENGVFIVSFPPHCTHRLQPLDVSVMGPLSTYYSQEVMTRLRNNPGRIVTTFHLGKLFGIAYSKAATLHNAMIGFSKTGICPLNPNIFSDHDFVSAITTDNDVTSTEPTTNSSPETRDNNIVNSTKEKDNPVLAVQLQSAQASPINPQPITPKQIAISPQPSMFCKLRRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -