Ospi003604.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- -
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000023.1:206399-208995[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-12 3.8e-09 35.9 0.0 6 34 55 82 52 88 0.93 2 2 4.6 4.3e+03 -2.7 0.0 30 38 109 117 109 121 0.84
Sequence Information
- Coding Sequence
- ATGATCTGTTTCAGGGCGACACGTTGTCTGGGACGATTACAAGATCGTTTGTCCGGACTtcggaagaagaatcgaagctGGCGAGTTTGGGAGTACGGATACTACAGGGGCAGAAGAAAAGTGACGATTTCGAGCAGATATACGTGTAAGGTTGAATACGTGGAAAAAGCCTTGGATGCTGTCGCGGGTGGAATGTCCTTTAGAAAAGCGGCAAAAATTTTTTCGATACCAAAATCCGTGCTGCATCacTTAAGAGCGTTGGGCTACATAAGTTGTCAGAAGATCACCTACCCGTGCAAGAACTGCGGCAAAGTCTACCACTATTATTCCAGCCTGGCTAGGCATCTCAAGCACGAGTGCGGCGTGGAACCAAAGTTTCATTGTCCATTGTGCCCGTACAGGACGAAGCACAAGTCCAGCCTGAACACGCATCTCAACGGGAGGCATATGAAGCTACTCAACGAGTTTTACGCGATGCCCAACGGGAACAAGTTGTCTTCCTCGATGGATACCActaattag
- Protein Sequence
- MICFRATRCLGRLQDRLSGLRKKNRSWRVWEYGYYRGRRKVTISSRYTCKVEYVEKALDAVAGGMSFRKAAKIFSIPKSVLHHLRALGYISCQKITYPCKNCGKVYHYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKLLNEFYAMPNGNKLSSSMDTTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090325;
- 90% Identity
- iTF_01090325;
- 80% Identity
- iTF_01090325;