Basic Information

Gene Symbol
ct
Assembly
GCA_032403825.1
Location
JAIFRP010000045.1:713681-728773[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-27 4.5e-24 84.0 0.0 2 72 559 630 558 635 0.95
2 3 2.6e-32 7.9e-29 99.2 0.0 2 77 967 1043 966 1045 0.96
3 3 9.6e-31 2.9e-27 94.2 0.0 3 75 1199 1272 1197 1276 0.95

Sequence Information

Coding Sequence
ATGACGTTCGCGGAAACCCGGTCCAACTACGATTTTGAATTCAATAATTGGGAAGACTCTGTTGGAAAACGACAACGTAGGTACGATACTACGGGGatcAGTCAATTGGTGGAGGAAGTGTCCAGGTTACAGCAGAACCTGCAACGCCTTCAAGAAACGAGCGCGCAAGCGACGGCGCGTCTCGAGGAGGAACTCGAGGCTAGAAGACAACACATCAATAGACTGGAGAGTAAATTGGAACGGCAGAGAGATTACGATGACCTGAAGCGCGAAATCAGCGTGTTAAGGTCGGTCGATCTCTCTCAGATTCCAACTGGCGAACCTGGCAAGAGCCTCGAACACCTTTTAATGGAACGTTCCAAGGCGCTTCAACAAGCTGAGAGCCTGAAGCCACCAAACACACCAGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCATGGGGTAGGAGGTGTGCCACCTTCGTCCCTCGTATCCTCCCAGCAAGCCCCACCGCCACCTCCGACCTCGGTATCCCTTCCGCCACGCTCCACTCCGACACCTTCCTCCGCAACATCGACGACTTCCAGCCTCCTTTTCCCGCCGCCACTCCAGAACGTCGAAACCTTCGGCTCCTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGACGTTGGAGAGGTCGATCATGAATCAacagcaccagcagcaacaacaacaacaggcgcaacagcaacaacagcaggcgcagcaacagcagcagcatcaacaACAGCAAACCACTCAGATCTCCCAACTAACGCAGCAGCAGCTGCAGCAAGTCCAACCGTTGCTAGGACTCCATCCACCTACGACACCGAGCAGTCTCAATCACCTACCCTCGCCGACGACCGAACCTTCGTCCAGCTCGAACGCACCGGTCAAGTCTAACACGCCTCTCGGCACGACGAATGTGTCCCTCGGCGGGACGGTTTCGATGGGTACGTCGACGCTGGGTACGACGACGCTGGGTACGACGACTCTAGGCGCGACGACGCTAGGCGCGACGACGCTAAGCGCGACGACGCTAGGCGCGACGGTACTAGGCGCGACGGCACTAGGCGCGACGGCACTAGGTGCGACGGCATTAGGCGCGACGCCTCTTGGCACCGCTTCGTTGGGCACCTCTACGATCGGCACGACGCCGCTCGTCGGTTGTCTCGGCGAGGCGACCGAGAAGGCGTCGACGCCGGTTCCCGGTCACGAAACGCCGGCGCCGCAGACGCCATCGTCGACGAGCGCACTGACATCGCCACCGAGCTTTCAGCCGCCCACGTCGATGGTCGAGACGAGcacctcctccgcctccgtaaacggcaacggcaacggagGCGTTACGCCCAGCGCCCTCCCAACGGCGCCGCCGCCAAAGAGTCCGGCGGATCAGGAGTCCTGtcacaataacaataacaacagcCATCACTTGACGAACAACAATATCGGCGGATTAAGTGTCCTCGACACGTTAAAAAGTCCCTTCCGCTTCGACGACAGAACGCATCCCTTCAGATTCGGTGACGAATTCGGAGCCGCCGGTATGGCCGGTAGACTCGGCGAATCTCTCATTCCCAAGGGCGATCCAATGGAGGCGAGACTTCAGGAAATGTTGCGTTACAACATGGACAAGTACGCCTCGCAAAACCTGGATACCCTCCACATTGCGAGAAGAGTACGCGAACTCTTGTCCATACACAATATCGGTCAGAGGCTCTTCGCCAAATACGTCCTCGGATTGAGTCAGGGTACCGTCAGCGAGTTACTTAGCAAACCGAAACCTTGGGATAAGCTCACCGAGAAGGGACGCGATAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGACAACGCCGTAATGCTGCTCAAGTCCCTAATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGCATGCCACCTTTCGCGCGTGGACCACAGGAAAGTGGTCCGCCAGACATGAGCGACGAGAGGTTGGCCCATATCCTCTCGGAATCTGGTCACCTACAGATGAGAGGCGAGCATGAGGTCTCGAACGACGCGGACAGTAAGAGTCCTAGCAGAATTGGCTGTCCGAGTCCGTTTAGTAAGGACAGACTCGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGATGACATTCCCCCGGAAAAGGTAGTCAGGATTTATCAGGAAGAGTTGACCAAGCTCATGGGCAGGAGAGTGGAGGATCTTCGTGGACCACGAGAATTCCCTCCTAGCGCGGTCTTTCCGCATTTTTTCAGTGGTGCGCAAGGGCTGCAAGGTATAGAGAGAACCCAAGAGGACATTCGATTGGCGTTGGACGCCTATCACCGAGAACTTCAAAAGTTGAACACGGGGCCGGGTCAGAATTCGGCGTTGGCGGGTTTGCCCGGATTACCTGGACTTCCTGGGTTATTGGCGCTTCAGCAGCAAGCTCTTCAGCAACATCACTTGGCGACGAACGGTGGCGGAGTGCAGGACTTGAGCCTCGGTAAAATGGACATaaggaataaaatgataaatggAGTgaccgaggaagagaaggaaaagatggAAGAGGCGATGAGACACGCCGGTAGCGCGTTCTCCTTGGTGAGGCCTAAACAAGAGACAACGGGACCTCAATCGACGCCCGGTGGTTCCAGCGCGAGCTCGCCACTCGGTAACTCCATACTACCTCCAGCGATGACGCCCAGCGAAGAATTTTCCGGCGCTGCGGCGGCCAGTCCGCTGCAAAGAATGGCCTCCATTACGAACAGCCTGATCAGCCAACCGTCCACTCCGACTCACCACTCATCTAATCAAAGACCACTCAAGGCCGTGCTCCCTCCTATTACTCAACAACAGTTCGACATGTATAATAACCTTAATACCGAGGATATCGTGAAGAGGGTAAAAGAGCAACTCTCGCAGTACTCGATCTCCCAACGTCTCTTTGGCGAATCGGTGCTGGGTCTCTCTCAGGGTTCGGTCTCCGATCTCCTGGCACGTCCAAAACCCTGGCATATGCTGACGCAGAAAGGTCGTGAACCCTTCATCAGAATGAAAATGTTCCTCGAGGACGACAACGCGGTTCACAAACTGGTTGCCAGTCAATATAAAATCGCTCCGGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACACCTATGAAACCGATGCCGCCGACAAAATTGGTCCAGGAACAGCTGCAGAACGCCGCGAAAGCTCAGGCCGCTGCGCAAGCAGCGGCACAAGCAGCGGCGCAACATCAGCAGGAGGCCCAGATGCAGTTGGGTCCACCTCAACAGAGTCCCCAGCTTCCGCCACATCCTCAGCCACCTTTGCCGATGATGCTAACACCACCGGGTCCTCACCACCCGCACGCTCAACTTAGCATGCAGGAACTTCAAAAgaaacaacagcagcaacagcaacaacaactgACTCTGCACTCCCCACATCATCAGATGACACCGTCGCCGCTTCGCGGACCTCACTTGCACATTTCCTCGAGCGTCTACGAGATGGCTGCGTTAACGCAGGATCTTGACACGCAAACGATCACAACGAAGATCAAAGAAGCATTATTAGCCAACAACATAGGCCAGAAGATCTTCGGAGAGGTAGTTCTTGGGCTGTCGCAGGGTTCCGTTAGTGAATTATTGAGCAAACCAAAACCGTGGCACATGCTGAGTATAAAAGGCCGGGAACCGTTCATCAGAATGCAAATGTGGCTGTCCGACGCGCACAACGTCGACAGATTGCAAGCGTTGAAGAATGAGCGAAGAGAAGCTAACAAGAGACGACGTAGCAGTGGGCCAGGACACGACAACAGTTCGGACACTTCAAGTAACGACACCGCGGAGTTCTATCATGCCGCTTCGCCTGGTCCAGGACCGGCTTCTGCGAAAAAGCAACGAGTTCTCTTCTCGGAGGAACAGAAGGAGGCCCTGAGGTTAGCGTTTGCCCTCGATCCCTACCCGAACGTAGGTACGATCGAGTTCCTCGCGAACGAGCTCGCCCTCTCTTCGAGAACGATAACGAATTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACGCCACACGGCCAACCGGAACCACAATCACCGAGGGAGCCCGGTCAGCCGTTCGATCGCGTGCAGTTCAGATTATTGCTAAATCAACGACTGGTCGAGATTCAGAAGGAGAGACTGGGTCTGGGCAATGTACCGCTACCTTATTCCCCATACTTTAACCCGAACTTGGCAGCATTGGTCGGAAACGCATTGAAAGAACAATGTTCCGGTTTGGATCTCTCGATGAATTCCCTCAAGAGAGAACCCAATCAAGAattcgaggacgaggacgcgGAAGACGCGATGAGTAATCTCGGAAGCGAAGACTCCGAGGGGTCTGCAGGTAGCATAAAGAGAGAACCAGCGGAAACGCCAACGGCACCGACCACGGTTAGGTCCAATAGAAGAAAACCCGCGGCACCGCAGTGGGTAAATCCAGAATGGCAGGAACCAGCGAGAACGGGTGACGAGGTGATCATAAACGGAGTCTGCGTCATGCAGACGGACGACTACGGTGTTAAGAGAGAAGCGGAGGAAACCATTAGGGTTGAACCTACACCGGTACAGGACAGATACGAGGAGGACGTCCAGAGCGATGTTTCCTCGGTCTCGGGTAACAACGGACCGGACAGAGACAGTCCGATGCCTAGTCCAAAGTCCGGCCAGAATAGTCCAGTGACGTCACCCAGGTCGCCATTGGTCCAGCAGACGGTGCAGCAGTCGACGGAAACGAGTCCCAAAGAGATCGTCAAGCACGAACCCGAGGAGGCGTGGGATTATTAA
Protein Sequence
MTFAETRSNYDFEFNNWEDSVGKRQRRYDTTGISQLVEEVSRLQQNLQRLQETSAQATARLEEELEARRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAESLKPPNTPDALGGLSSPLQRASTASPHGVGGVPPSSLVSSQQAPPPPPTSVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQHQQQQQQQAQQQQQQAQQQQQHQQQQTTQISQLTQQQLQQVQPLLGLHPPTTPSSLNHLPSPTTEPSSSSNAPVKSNTPLGTTNVSLGGTVSMGTSTLGTTTLGTTTLGATTLGATTLSATTLGATVLGATALGATALGATALGATPLGTASLGTSTIGTTPLVGCLGEATEKASTPVPGHETPAPQTPSSTSALTSPPSFQPPTSMVETSTSSASVNGNGNGGVTPSALPTAPPPKSPADQESCHNNNNNSHHLTNNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPPFARGPQESGPPDMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFSKDRLDSQNRRLKKYENDDIPPEKVVRIYQEELTKLMGRRVEDLRGPREFPPSAVFPHFFSGAQGLQGIERTQEDIRLALDAYHRELQKLNTGPGQNSALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKMDIRNKMINGVTEEEKEKMEEAMRHAGSAFSLVRPKQETTGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSSNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQEAQMQLGPPQQSPQLPPHPQPPLPMMLTPPGPHHPHAQLSMQELQKKQQQQQQQQLTLHSPHHQMTPSPLRGPHLHISSSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDRVQFRLLLNQRLVEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNSLKREPNQEFEDEDAEDAMSNLGSEDSEGSAGSIKREPAETPTAPTTVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDVQSDVSSVSGNNGPDRDSPMPSPKSGQNSPVTSPRSPLVQQTVQQSTETSPKEIVKHEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01512731;
80% Identity
iTF_01089889;