Basic Information

Insect: Odontomyia ornata
Gene Symbol: RREB1
Assembly: GCA_963969285.1
Location: OZ017739.1:183962037-183967137[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.014 5.8 10.7 0.6 1 21 150 170 150 172 0.95

2 14 0.00096 0.4 14.3 0.3 1 23 182 204 182 204 0.98

3 14 3e-05 0.013 19.0 7.5 1 23 210 232 210 232 0.98

4 14 0.071 30 8.4 3.3 2 21 372 391 372 392 0.94

5 14 4.1 1.7e+03 2.9 0.7 1 11 435 445 435 455 0.80

6 14 0.011 4.8 10.9 0.1 1 23 594 616 594 616 0.97

7 14 0.00037 0.16 15.6 2.5 1 23 625 647 625 647 0.98

8 14 0.0011 0.45 14.2 2.0 1 23 653 676 653 676 0.97

9 14 0.0062 2.6 11.8 2.2 1 23 983 1006 983 1006 0.96

10 14 0.00049 0.21 15.2 0.7 2 23 1288 1309 1287 1309 0.97

11 14 0.19 79 7.1 6.3 1 23 1315 1338 1315 1338 0.97

12 14 4.7 2e+03 2.7 6.0 1 23 1402 1424 1402 1425 0.94

13 14 0.079 33 8.3 0.9 3 23 1473 1493 1471 1493 0.92

14 14 0.0032 1.4 12.7 4.8 1 23 1499 1521 1499 1521 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.014	5.8	10.7	0.6	1	21	150	170	150	172	0.95
2	14	0.00096	0.4	14.3	0.3	1	23	182	204	182	204	0.98
3	14	3e-05	0.013	19.0	7.5	1	23	210	232	210	232	0.98
4	14	0.071	30	8.4	3.3	2	21	372	391	372	392	0.94
5	14	4.1	1.7e+03	2.9	0.7	1	11	435	445	435	455	0.80
6	14	0.011	4.8	10.9	0.1	1	23	594	616	594	616	0.97
7	14	0.00037	0.16	15.6	2.5	1	23	625	647	625	647	0.98
8	14	0.0011	0.45	14.2	2.0	1	23	653	676	653	676	0.97
9	14	0.0062	2.6	11.8	2.2	1	23	983	1006	983	1006	0.96
10	14	0.00049	0.21	15.2	0.7	2	23	1288	1309	1287	1309	0.97
11	14	0.19	79	7.1	6.3	1	23	1315	1338	1315	1338	0.97
12	14	4.7	2e+03	2.7	6.0	1	23	1402	1424	1402	1425	0.94
13	14	0.079	33	8.3	0.9	3	23	1473	1493	1471	1493	0.92
14	14	0.0032	1.4	12.7	4.8	1	23	1499	1521	1499	1521	0.99

Sequence Information

Coding Sequence: ATGGAACAGAAACGACGAACTTCAGTGACTTCAGAATCTTCCCTAGAAGCAATTGACTCAGTACGTACCTCAAGCAAGCCCAAAAAAGAAGCTATGGTTATGGATTCCACTCCTAGCACTTCGGAAAACAATGACTCAGATAATTTTGAATCGGAAACGGACTATTCTTCGACTCGTCGAACCTCTACTTCTAGTTTGCAAGAAACCCGGCGTAGTCACATGATCTGTGGAAGGAAGTTCCGTAGTAGTACACCTATTAACGAATACGAGAAGAATCATCAGAAGAATAACAGTAGCGGCTATTCTATTAAGGACGCAAGCAACTCTTCTCATGTATTAACCGTACAAAAAGAGAAGACTCAAAACGAATCTGGATTTGTGGATATGAGTAGTCACCATTTAAATTCTAGTCCCGAACTGGGATCTACTGAACGCGATGATGTCAAGTATATTTGTCCGATTTGCGAAGTAGTCTCGGCAACTCCTCATGAGTTTACCAATCACATAAGGTGCCATAATTATTCATCGGGGGATACGGAAAACTTTACTTGTCGTATTTGCTTCAAGGTATTATCGTCAGCCTCTTCATTGGACCGTCATGTGTTGGTACATACGGGCGAACGACCATTCAATTGCAAATACTGCCATCTCACATTCACCACAAACGGAAACATGCATCGACATATGCGGACACACAAGCAGCACGTGCAGCAACGGAACATTAACATCGTTAGTGGCGGTGATGGGGCTACCAATAAAAGCAATGCTCCTGCTGATAGCAGAAGCAGTGGGAGTAGAAATGGGGATGGCGAAAGTGACGAAAGCGATGGCTGCTCCTCGGACTCGAGTATAAGCAATTTAAACAATAACCGCACCACATGCCTCATCAACAACAATAATCTCTTCAAACGCAAGAACAGCGAAGAGGAAAACAGCGTTTTAAAACGGCGAATAAAGAccatcaacaacaacaacatctaCAGTGAAATCGAATTTGAATGCATCGACCCTTCCACACAAAAATATTCGTGTCCTTTATGCAACCGAGCCGATTTTCTGAATATGTTTACGTTAGGTATTCACATGGACCGCGAACATCccggtatcccagccaaatgcCGACAATGCGAAATGGTGTTTAAAAGCCACAAATCTTTAAACGCACACCGGTGTGTGCAAGAAACAAACATAACCCAGGGCTTCAAAGACCTCACATTTGTAGACTTCACCAGTGAGAAGTTCCCGCTCATCGCAAAGTCGTTATGTGAACAATCCGTACGGACCCCCATAACGAAACAGAAATTCGAATGTCCCAAGTGCTATCGAGCCTTTCCGTGCACTAGTGCTGTCGAGATACATGCCAAGGATTGTGGGGACTCGCCTCATGACTACTCGCTGCGCAAAAGAACTTGTAGCGAGAGTTCAGAAGACGAATCACGACGAGATGAATTTTTTGCTCATTTAGATTTACGCAACAAGTCTGCCATGAGTTTAGCCAGTACAATGTCATCTCCGCGAACATCTGAGAAATCAGACACGCTCGCGAAATCCTATCTGGAAAGAACTCCGCAATCTGCAATTTATACCTGCAACGAGTCTAAAGACCTAGCTGATATACAATCAATATTAAACGTGACTTCAACCTCGAATAGTTTCTTGAGAAACTTTGAAAATGCTGTGAACACACCGCCAACGAGTGACTTCAATCTTGGTAAAGACGAAGAGGAAGCGCAGGATGCTTTTACTTCAGAATTCCGAAAAATGAAGTTACGAGGTGAGTTTCCTTGTAAATTATGCAGCGCTGTTTTCCCGAATTTACGGGCATTGAAAGGACATAACCGAGTGCACTTGAGTGCTGCTGGTGCCGGGCCCTATTGCTGTAACATGTGCCCTTATTCGATTCATGATAAGGCTGCATTGATTCGACATATGCGTACACACAACGGCGATAGACCTTACGAATGTGCCGTATGCAATTATGCTTTTACGACCAAGGCAAACTGCGAGCGTCATCTGCGCAATCGTCATGCGAAAACAACGAGGGAGGAAGTGAAGCGAGCAATAATTTACCATCCCTCCGAGGACTCAAGTTGCGAGGATCAACAAAAAAAAGTGCAAATGTTCTCATCACCAGAGCTTGATGATGAGGAGCATTCGAGCCCACCAAAAGACCGCTCCACTCCAGTATCGCACTTAAAAGAGATGCTACAATCTATTAACCCAGCTAAGATCCAAGTTAAGAGTTTGGAAAAATTGATGGGAAGCTCATGTACTTCGAAAGAAGCATGCACAGATAATGCACAAGGGTGTACTGGCAGCTCTGTTCACATGGAATGCACAAGGCCTATAGACTTAACCATGGATGTTTTAGATCTTAgtaagaaaacaaaatcaaaacaaGCAAGTAACGAAGAAAAGCCGGAAGCTAAGCCACCAAGTTTTCCAGCATTAGATAAGAGTCATAACTGGTTCCTCGCCCAGCAACAGTTACTGAAGGACTCTGTTTCTCAAATTGACCCTGCGCATTATATTCAGTTATCGCAACTGTACCGTAACTTAATGTTCCCAACGATCCCTCCATTTCTGTTCCCAAACTCCTTCCTTCCGAACAGCTTTGGAGATATAAACAAGTTTCCCTCGATGCTTCTCAATCCGATGTTCCCACCAATTTCCAATGGGACTGAAGAAGTGGCAAATCGGCACGCTCAATCCGTGGATTCATTGATGAAATCCCCTGAAAATCATCAGCCAAATTCGCCTGCTTCTACCCAGCTGCTTCCACCATCGCCTCAACAGTTGAATATTCCGCGTCATCCTCTAGCAAGTACTCAACCACCAGCCAACATGATGCCGCAGATCCAGAATGTCGGACCAGTGAAAATGGTTATTAAGAATGGAGTGCTCATGCCCAAGCAAAAGCAGCGTCGGTACAGAACGGAACGACCATTTACTTGCGAACATTGCGCTGCACGCTTTACATTGCGTTCAAATATGGAACGGCACGTGAAACAGCAACACCCACAGTTCTGGGCACAACGACAGAGGAGTGGGCACCACATTTTACGTCGAAGCGGAACCGTAATGCAACAAATCAATTCAACTAGTGTTTCTCCGCAAAACTGTGGGCCGCCCCAAAATCAGTTCTCTGCTATATCCGATCATGTAAAATACGCGATCTTAGCGCAACAGCTGAAAGCAAGAAAAGACACCGATATTCTTCAGAAAGCGTTAACCCAAAACAAAAACGTGGAGGGCAGTCACTTGAATTTGATGAGTAATGTTATTGCAAATGCTGGAGGAAATATTGGGCTGGAAGATGATGATCCAAAACTAATAATTGACGAAGGAAATCATGAGAACGACGAAAATGACGAGGAAGATGAAGTCTTTGATGAACCCGAAGTTGAAGATGCTTCCAAATGCTCACCTAACACTTCAAAATGTCTTTCGGATGGCTTGACGAAACCGGAGGCTCATATGTCTCAAAATGATTTAAaggatttaaatgaaaaatgtagAAACGACCCGAACTGCATGGACACTTCTGAGACCACGTCTGAACCTGACGAGCCATTAGGGAAATATTTGAAGAACTCCACAAATTCATCGTTCAAAGAAGAATCTTCGGATCTTGTTTCCGTGATAAAATTGGTTGATAACGCTAAAAACTCCCTCTCATCTTTCAACAATTATTTCCAGCCGACTAATATGCCCAGTCATATGGACCAAAGTGATGAAGAAGGTTTGGTAGCTTCTGGGAGTACTTCTGAAAGTAATAATTCTGGAAACGAAGATCCGCAGAGTGTCTATGGGGGTGAAGGTAAACGAAAGTCAGCTTACAGCCTAGCTCCAAATAGAGTTTCTTGCAACTATTGTCAAAGAACGTTCCCTTGGACCAGCTCGCTACGACGCCACATTTTGACTCATACGGGTCAGAAACCTTTCAAGTGCTCGCACTGCCCCCTTCTTTTCACAACCAAAAGTAATTGCGACAGACATTTGCTCCGAAAACATGGGAACATCGATTCGGCTGTCTCGTTGTACGTTCCGATTGATGACATTCCCGACCCAGTTCCCGTACCGAAAGTTGAGGAACCTGCAGAGGAGACCCGTAAGCCATTCCCATCTGTTGCGAATGTTACTGGGATGAGTTCTTCAAATGTGAAACTATTGGAACCACTGATTATTTCGTCGGATTTGCCGTTCAAATGCCATTTATGTGACAGCTCCTTTGCTGAAAGAAATCAATGTCTAGAGCACATAAAATTACATCATCACCAGGAGTTCACTTTACTCTTGGCTAAAGGTGCAATCGACGCAGAGACGGACTATAATCAAATCCATTCTACGGAAGATGAGGAACGAGTTGGTGAAGGGCGCGGAAAATATCCTGACTATGCAAATCGCAAGGTTATGTGTGCATTTTGTATGCGTCGCTTCTGGTCAACAGAAGATTTGCGTCGCCACATGCGCACCCATTCTGGCGAGCGCCCTTTTCAATGTGACGTGTGTCTTAGGAAGTTCACCTTGAAGCATAGCATGTTGCGGCACATGAAGAAGCACAGTAACGGGCAAAATCATCACCAGTCAAGTGTTACGAATAGCGGGTCCGACATGTCCGAGGACGAGCAGCCCGTTTCGATTCTTCATAAGAATCCCCTTATTCAGCAGAAAATACGTGAAGCACTCACTcatgcagaagtctggcggaaCAGCAATTTATTTGGTGTCAAGCAAGAGAGCAGTTTGCAACAGTCTTTACCCTGCAGTACATCCGAGAAAGAGAGCTTAGGAATCGGCAGAGGAGGCACGATTGAAGAAAATTCTGATCTCATCAGCGATCTATTAGGCATCAGGGGGCAAGGAATCCTCAATAAACTACTATCATCAGCAGAAGAAGCGGCCAAATTATTAGGAGTCGACAAATAA
Protein Sequence: MEQKRRTSVTSESSLEAIDSVRTSSKPKKEAMVMDSTPSTSENNDSDNFESETDYSSTRRTSTSSLQETRRSHMICGRKFRSSTPINEYEKNHQKNNSSGYSIKDASNSSHVLTVQKEKTQNESGFVDMSSHHLNSSPELGSTERDDVKYICPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICFKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHVQQRNINIVSGGDGATNKSNAPADSRSSGSRNGDGESDESDGCSSDSSISNLNNNRTTCLINNNNLFKRKNSEEENSVLKRRIKTINNNNIYSEIEFECIDPSTQKYSCPLCNRADFLNMFTLGIHMDREHPGIPAKCRQCEMVFKSHKSLNAHRCVQETNITQGFKDLTFVDFTSEKFPLIAKSLCEQSVRTPITKQKFECPKCYRAFPCTSAVEIHAKDCGDSPHDYSLRKRTCSESSEDESRRDEFFAHLDLRNKSAMSLASTMSSPRTSEKSDTLAKSYLERTPQSAIYTCNESKDLADIQSILNVTSTSNSFLRNFENAVNTPPTSDFNLGKDEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRVHLSAAGAGPYCCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDQQKKVQMFSSPELDDEEHSSPPKDRSTPVSHLKEMLQSINPAKIQVKSLEKLMGSSCTSKEACTDNAQGCTGSSVHMECTRPIDLTMDVLDLSKKTKSKQASNEEKPEAKPPSFPALDKSHNWFLAQQQLLKDSVSQIDPAHYIQLSQLYRNLMFPTIPPFLFPNSFLPNSFGDINKFPSMLLNPMFPPISNGTEEVANRHAQSVDSLMKSPENHQPNSPASTQLLPPSPQQLNIPRHPLASTQPPANMMPQIQNVGPVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHVKQQHPQFWAQRQRSGHHILRRSGTVMQQINSTSVSPQNCGPPQNQFSAISDHVKYAILAQQLKARKDTDILQKALTQNKNVEGSHLNLMSNVIANAGGNIGLEDDDPKLIIDEGNHENDENDEEDEVFDEPEVEDASKCSPNTSKCLSDGLTKPEAHMSQNDLKDLNEKCRNDPNCMDTSETTSEPDEPLGKYLKNSTNSSFKEESSDLVSVIKLVDNAKNSLSSFNNYFQPTNMPSHMDQSDEEGLVASGSTSESNNSGNEDPQSVYGGEGKRKSAYSLAPNRVSCNYCQRTFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNIDSAVSLYVPIDDIPDPVPVPKVEEPAEETRKPFPSVANVTGMSSSNVKLLEPLIISSDLPFKCHLCDSSFAERNQCLEHIKLHHHQEFTLLLAKGAIDAETDYNQIHSTEDEERVGEGRGKYPDYANRKVMCAFCMRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHMKKHSNGQNHHQSSVTNSGSDMSEDEQPVSILHKNPLIQQKIREALTHAEVWRNSNLFGVKQESSLQQSLPCSTSEKESLGIGRGGTIEENSDLISDLLGIRGQGILNKLLSSAEEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -