Basic Information

Insect: Odontomyia ornata
Gene Symbol: Sall1
Assembly: GCA_963969285.1
Location: OZ017738.1:454351771-454362642[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.5 2.1e+02 5.8 1.8 2 23 325 347 324 347 0.96

2 9 0.00021 0.087 16.4 2.7 1 23 380 402 380 402 0.99

3 9 0.00031 0.13 15.9 1.5 1 23 410 432 410 432 0.97

4 9 4.7e-06 0.002 21.6 1.0 1 23 440 463 440 463 0.97

5 9 0.17 70 7.3 0.9 2 23 470 491 469 491 0.95

6 9 0.68 2.9e+02 5.3 2.4 2 23 500 521 499 522 0.94

7 9 1.9e-05 0.0081 19.7 0.4 1 23 530 553 530 553 0.95

8 9 2.4e-05 0.0099 19.4 0.6 1 23 559 581 559 581 0.95

9 9 2.3e-05 0.0095 19.4 5.0 1 23 587 610 587 610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.5	2.1e+02	5.8	1.8	2	23	325	347	324	347	0.96
2	9	0.00021	0.087	16.4	2.7	1	23	380	402	380	402	0.99
3	9	0.00031	0.13	15.9	1.5	1	23	410	432	410	432	0.97
4	9	4.7e-06	0.002	21.6	1.0	1	23	440	463	440	463	0.97
5	9	0.17	70	7.3	0.9	2	23	470	491	469	491	0.95
6	9	0.68	2.9e+02	5.3	2.4	2	23	500	521	499	522	0.94
7	9	1.9e-05	0.0081	19.7	0.4	1	23	530	553	530	553	0.95
8	9	2.4e-05	0.0099	19.4	0.6	1	23	559	581	559	581	0.95
9	9	2.3e-05	0.0095	19.4	5.0	1	23	587	610	587	610	0.98

Sequence Information

Coding Sequence: ATGCTCTGCCGTATGTGCTTACTTGATTCGGATAATACATTGTGTATTTTCGATCAAGAGTCGATTCAAATAGAAATAGCCCCAACAATTGGTCGGCATTTCTGGTTCGAGCCTGCAAAAGACGATCCTATTTCAATCATGATTTGTATCGGTTGCTGGTCAAAAATTCAGGATTTCCACTTGTACTATCTGACAGTGGAAGATGCTCAGCGTTGCTTGACAGAAAATGCTCTAGTTAAGGAAGAGTCTGTCCAAGTGGAAATTTTAAAGAATGAATATGGCGAAGAAGACGTAGATAAAAAGGATGTCATAATTGAAAATTTAGTAGACAAAAAACATTTGCCTGAGAATACTACAGGACCTGTTTTTGTGGAAGTGGATGTCGACGATGCCGATGTGAACGCAGAGGAACCTATCGCTCATGTAATATATTCAGATGGTGTTAGTTATGACGTTTATGaagcagaagaagatgaagatgaggttGAAGACAATCCGATGGACGAAGATTATGTTAATGATGATAACGACTCTTGTTCATCGGATGAGGAACCTTTGGCAAATAAAGTTGTGCGAAAAACTGTGGATAttgttgaagtaaaaattgaagaGAAACCAAGAAGAGGGCGGAAGAAAGGtagcaaaaacaaaataaagaaagAGCCGAAAACCTTCCAAAGCAGTCATATTAAAGATGAGGATGATCCTGAAGATATTAATGATTATTCAAATGATGCAGAAGCACATATTAAAAGCGAATATCCCGTCGAGGGTTCGGTTAAGCTAGAGAACGATGATGACAATGAGGAATCAATACAAGCAATTGAAACGCCGAAGAAAAGAcgtggcaggaaaagaaaatccGAAATGTCTGATGATCACTCACCGCCCGTGACAAAAAAGCCAGGCGAATCTGAATATCGTAAGAAAAACAAAGAGTATGATGATGAAATCTCGCAATTTTTAAGGTTGAGATGTGAATTGTGTTTGACTGAGTGCCAAACATTCGCAGACGTAAAAAGACATTATCGAACTGTTCACAACAGACGGGGATATGTGATATGCTGTACAACGAGAAAATTTTACAAACGTGTTTTTCTTTATGAACATATACAAAAGCACAAAAATCCAGACACGTTTAAGTGCCAATTCTGTGAAAAAGTATATTGCAGTGCGTCAGTTCTAAGAAGTCACTTATTGACCCACGACGCGTCCTTTGAAAAATTATATCAATGCGACAAATGCCCAAGACGGTTTGCAAAGCTTTCCGTCTTGAACCACCACAAAATCATACATATTCCAAAAGAAGAACATTCGTTTTCTTGTGACATTTGTGGAAAATCATTCCCTTCCAAAAATACAATGCAAACTCATCGAAAATCTGTCCACGAAAAAGCCTATTCAAAAATGTGCCACATATGTGCGAAGGTCATCAATGGAAAAACTTTGTTTGCTAAACATCAATTGGAGCATATTGGTATTGTGGATCCAAAAATGCAATGCGAAAAGTGCGGAATGTGGTTAAAGAATGCATTCAGATTGAAAATTCACACGAAGAAACATCATAGCGAAGAGAACACGGGCGATCATATATGTAACATTTGTGGAAAAGTATCTAGTTCTAGTGTGGGATTAAAGAGCCACATTCGATATGTACATGCGGCTCAACGTAAATTCTTATGCAGTGTTTGCGAGAAAGGTTTTAAGACAGCATTGAATCTGAAGGAACATATGACAACGCATACGGGCGACATTCTTTACACTTGTCCACACTGTCCGAAAACATTCAACTCCAGCGCGAATATGCATTCGCATCGTAAGAAAATGCACCGACAAGAGTGGGAAGAAAGCAGAAGAAGCCGAGGTCTGCCGGTAAATACAAAAGGAAAAAGAGTTATTCAAACATTACCCGAGGACAGTGCTGAAAATGAAGACATAAAAGTAGCGCCAGTGCTGACTGTCATTGGAACACAGCAATTTTTAGAGAATTCTGACATAAATGGTAGACTGGCTAATTTATTATAG
Protein Sequence: MLCRMCLLDSDNTLCIFDQESIQIEIAPTIGRHFWFEPAKDDPISIMICIGCWSKIQDFHLYYLTVEDAQRCLTENALVKEESVQVEILKNEYGEEDVDKKDVIIENLVDKKHLPENTTGPVFVEVDVDDADVNAEEPIAHVIYSDGVSYDVYEAEEDEDEVEDNPMDEDYVNDDNDSCSSDEEPLANKVVRKTVDIVEVKIEEKPRRGRKKGSKNKIKKEPKTFQSSHIKDEDDPEDINDYSNDAEAHIKSEYPVEGSVKLENDDDNEESIQAIETPKKRRGRKRKSEMSDDHSPPVTKKPGESEYRKKNKEYDDEISQFLRLRCELCLTECQTFADVKRHYRTVHNRRGYVICCTTRKFYKRVFLYEHIQKHKNPDTFKCQFCEKVYCSASVLRSHLLTHDASFEKLYQCDKCPRRFAKLSVLNHHKIIHIPKEEHSFSCDICGKSFPSKNTMQTHRKSVHEKAYSKMCHICAKVINGKTLFAKHQLEHIGIVDPKMQCEKCGMWLKNAFRLKIHTKKHHSEENTGDHICNICGKVSSSSVGLKSHIRYVHAAQRKFLCSVCEKGFKTALNLKEHMTTHTGDILYTCPHCPKTFNSSANMHSHRKKMHRQEWEESRRSRGLPVNTKGKRVIQTLPEDSAENEDIKVAPVLTVIGTQQFLENSDINGRLANLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01376154;
90% Identity: -
80% Identity: -