Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017738.1:95863694-95875088[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00062 0.26 14.9 1.0 1 23 191 214 191 214 0.94

2 11 7.8 3.3e+03 2.0 0.5 3 21 221 239 220 242 0.68

3 11 0.00071 0.3 14.7 1.4 1 23 247 270 247 270 0.96

4 11 0.0042 1.8 12.3 2.3 2 23 277 298 276 298 0.97

5 11 0.028 12 9.7 2.3 2 23 305 326 304 326 0.95

6 11 0.059 25 8.7 0.4 1 23 332 355 332 355 0.90

7 11 1.2e-05 0.0049 20.3 1.3 1 23 386 408 386 408 0.99

8 11 0.0079 3.4 11.4 2.4 1 23 414 437 414 437 0.95

9 11 1.2e-05 0.0052 20.3 0.3 1 20 443 462 443 465 0.93

10 11 0.00016 0.069 16.7 2.4 1 23 471 493 471 493 0.98

11 11 0.01 4.3 11.1 2.8 1 23 499 521 499 521 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00062	0.26	14.9	1.0	1	23	191	214	191	214	0.94
2	11	7.8	3.3e+03	2.0	0.5	3	21	221	239	220	242	0.68
3	11	0.00071	0.3	14.7	1.4	1	23	247	270	247	270	0.96
4	11	0.0042	1.8	12.3	2.3	2	23	277	298	276	298	0.97
5	11	0.028	12	9.7	2.3	2	23	305	326	304	326	0.95
6	11	0.059	25	8.7	0.4	1	23	332	355	332	355	0.90
7	11	1.2e-05	0.0049	20.3	1.3	1	23	386	408	386	408	0.99
8	11	0.0079	3.4	11.4	2.4	1	23	414	437	414	437	0.95
9	11	1.2e-05	0.0052	20.3	0.3	1	20	443	462	443	465	0.93
10	11	0.00016	0.069	16.7	2.4	1	23	471	493	471	493	0.98
11	11	0.01	4.3	11.1	2.8	1	23	499	521	499	521	0.95

Sequence Information

Coding Sequence: ATGTTAAGTTTCTATCATAAATCAGCACAACAAAGTATCATCCCTAAAAGAGCCAGAAATCATTACGCAGAAAAAAATGAGCAACTTAAAAAGGCTAATATTGCAAGAACGTACGAAAACTTAATCGCAGATAATGGCACTGATGATTGCGGAAACGGAATTCCTAATTCAGGACATGTGTCAATTAATTCCAAAACTAACAATAACCATATGAGCATAGATTTAGATCTAATAGGCGAAAGTACGGGATATGTAATAGAAAAAACTGAAATAGAATTTATAGACGAGGCGTTGATAAATGGCATATCAAGTGATGATGACTATGAAGAATTAAACATAAACGACACTAATTGGAAATGTGAATTTTCAATTGATTCAAATGATGCTAACGGGAAAGAACTACCATCGAGCAGCACTATTCAAATTAATGATATAGCAAAAAATATACAGGAAGAAACCACAAGTACGAAGAAACAAATGCCAAAGAAAGAGAAATCTCAGTGCCCGTATTGTTTTggattttatcaagtaatgataaACCATCTGAGGTCATGCTCAGCACGAGCGAAACACATATGTAAATATTGTGATTTAGGGTTTGAAACGAGTACTACGCTAAATGAGCACGTCGAGAAAATGCACCCCGAAGGCTTGCCCGCCTGTCATATATGTTTTGCTACATTTGACAATATTAAAGTCCGCGGGGAGCATGTACGAAGAGAACACAGAAAAGTTGAATTTAAGTGCGAAAAGTGCGGCCGTGAATTCCGTAGCAAGGTTATGCGTGATGAGCATATGGAACGAAAGCACacagaaaaaattaataaaaaatgtgATTTGTGCAACAAAGTAATTAAAACTGAGTTTCTCTTTCGGAGGCACTTGAAACAACATGAAATGGCAGATAAACTGAAATGCCGATTTTGCGGAAAAATATTCACGCGAATGCAGTTTAAGCTTAAGCATGAACGGATTCATACAGGTGAGACACCTTTCTTGTGCGAAATGTGTGGACAAGGGTTCCTTACTCTCGTTGAATTAAATCGTCACAAAACATATACTCATATGGAGGATGAAAATGCCGGCAACGAGATTGGTCTCGGAAAGAGAATACGGTCTTGTTACAAGCTAAAGAAGCGGTTCGGACCGTTGCGATTTAAATGTGCTATGTGTCCCAGGGAATTTGCTACAAGCTATGGTCTAAATCATCATCTAAAAATGCATACGGAGGATCGCAAATATGTTTGCGAACAGTGTGGAAATAGATTCCATCGACTAGTGCACTTAAAAGGGCATGAACTTCGAATGCATGCAAAAGTGAAACGCTTTTCTTGTCCAATATGTGGTAAAATGTTTTGTGAAAAACCTGAACTGAATGTCCATATGCCAGTACATCAAGAAGAGCGGCCTTTTGAATGCCCACATTGTCCCGCTAGATTTAAACAACAAAGGAGGTTGAAGTATCATTTAGCAAAGCACTCTACAGCGGAGCCTTATGTTTGTCAGTGTTGTGGAAAGGCATTTAAATTACTCCGAAACTTAAAAACACACTTTCAAGCCCATACGGTGGAAGAAATCAAAGCGATAGAGCGAAAACTTCTTTACGACATGGAAAATTCTATGGAAGCCAATCGAATTGCGAAAATAGACGAAGAAAATATGATCGAGGAATCAGAATCAAAACAGATTGAATTCGATTATACAACagaaatttaa
Protein Sequence: MLSFYHKSAQQSIIPKRARNHYAEKNEQLKKANIARTYENLIADNGTDDCGNGIPNSGHVSINSKTNNNHMSIDLDLIGESTGYVIEKTEIEFIDEALINGISSDDDYEELNINDTNWKCEFSIDSNDANGKELPSSSTIQINDIAKNIQEETTSTKKQMPKKEKSQCPYCFGFYQVMINHLRSCSARAKHICKYCDLGFETSTTLNEHVEKMHPEGLPACHICFATFDNIKVRGEHVRREHRKVEFKCEKCGREFRSKVMRDEHMERKHTEKINKKCDLCNKVIKTEFLFRRHLKQHEMADKLKCRFCGKIFTRMQFKLKHERIHTGETPFLCEMCGQGFLTLVELNRHKTYTHMEDENAGNEIGLGKRIRSCYKLKKRFGPLRFKCAMCPREFATSYGLNHHLKMHTEDRKYVCEQCGNRFHRLVHLKGHELRMHAKVKRFSCPICGKMFCEKPELNVHMPVHQEERPFECPHCPARFKQQRRLKYHLAKHSTAEPYVCQCCGKAFKLLRNLKTHFQAHTVEEIKAIERKLLYDMENSMEANRIAKIDEENMIEESESKQIEFDYTTEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -