Basic Information

Insect: Odontomyia ornata
Gene Symbol: POL
Assembly: GCA_963969285.1
Location: OZ017741.1:20659767-20677493[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00024 0.099 16.2 1.0 1 23 807 829 807 829 0.98

2 8 2e-05 0.0084 19.6 0.4 3 23 838 858 837 858 0.99

3 8 6.5e-06 0.0027 21.1 0.5 1 23 864 886 864 886 0.98

4 8 0.026 11 9.8 0.0 1 23 892 914 892 914 0.97

5 8 0.0034 1.4 12.6 2.7 1 23 920 943 920 943 0.96

6 8 3.7e-05 0.016 18.8 2.9 1 23 949 973 949 973 0.98

7 8 2e-05 0.0082 19.6 2.7 1 23 979 1001 979 1001 0.98

8 8 0.00019 0.081 16.5 0.5 1 23 1007 1029 1007 1029 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00024	0.099	16.2	1.0	1	23	807	829	807	829	0.98
2	8	2e-05	0.0084	19.6	0.4	3	23	838	858	837	858	0.99
3	8	6.5e-06	0.0027	21.1	0.5	1	23	864	886	864	886	0.98
4	8	0.026	11	9.8	0.0	1	23	892	914	892	914	0.97
5	8	0.0034	1.4	12.6	2.7	1	23	920	943	920	943	0.96
6	8	3.7e-05	0.016	18.8	2.9	1	23	949	973	949	973	0.98
7	8	2e-05	0.0082	19.6	2.7	1	23	979	1001	979	1001	0.98
8	8	0.00019	0.081	16.5	0.5	1	23	1007	1029	1007	1029	0.98

Sequence Information

Coding Sequence: ATGATAGACAACCCCAACCGAGGTATAGGGACAGCAACAACCAAAATAGAAACAACAGCTACAATAGAAACTACAACAACCACAACCAAAATACATACAACAATAACAGAGCAAACAACCCACAAAGACCCAGACCGAACAACAACAACCAAAGATACTACAACAATCAAAACCGTAGCGCCAGGCGCATACAAGAAAACTGAAAGATGGAATAAGTTGAAAGAAGTCCTTAATATAAACTCCGCAGACCCTGAGGCCAAAACTTCCATAGAAACCATATGCAAAGAGTACCACGATATTTTCCACATAGAGGGAGAAAAACTTACATGCAATGACTTCTACAAACAACACCTGCAAACCACTGACAATAGTcccgtatatataaaaaattaccgCATGCCTCACGCACAAACTGCAGAGATCAACAAACAAGTTCAAGAATTGATCGACAAAGATGTGATCGAGCCATCAACAAGCCCCTACAACTCCCCCATGTTGATCGTCCCCAAACACTCCAATGACGACACTAAGAAATGGCGCTTAGTAGTCGATTACCGCCAGCTGAACAAAAAGTTAGTGAACGACAAATTCCCTCTCACTCGCCTAGATGATATCTTAGACAGAATAGGCAGAGCTAAATACTTTTCAACCCTCGATATGACAAGTTCATTTCACCAGATAGAACTTGATCGAGAATCCCGGCCCATGACAGCATTTTCGTCTAGCAATGGACATTACCAATTCAAAAGACTCCCCTTTGGATTGAAAATCTCGTCAAATAGTTTCCAGCGCATGCTGACCATAGCTCTATCAGGATTGGACGCAAACGCATTCCTATACGTTGACGACATTATCGTTTTTGGCTGTTCCTTAAAACACCACAATGAAAACCTCAGGAAAACTTTCGACCGACTTCGCAAATATAATATGAAACTCAACCCTTCGaaatgtaatttcatacaatCAGAAATCGTCTACCTAGGACATCTAATCACTAACAAAGGTGTCACCGCCGATCCCTCTAAATGCGCAGCTGTCAATAACTACCCACTACCACAAAATGCAGATGATGTAAGACGTTTCGTAGCATTCTGCAACTACTACAGACGCTTCGTCCAAAATTTTGCAGCAATCGCTAAACCTCTAAACGATTTactcaagaaaaacaaaaaattcgaatGGAATGAAAAATGCCAAGAAGCTTTTCAAACCTTAAAAGACTCCATTACATCCCCTCCAATTTTACAATACCCCGACCTCGACAAAGAATTCATTTTAACAACAGACGCCTCCGATTATGCCTTAGGAGCCGTTCTGTCACAAGGAACGATCGGAGAAGACCTACCGATCTCTTATGCAAGTAGATCCTTAACGAAATGCGAAACTAACAAATCCGTTGTAGAAAAAGAACTCCTTGCAATTTACTGGGGAATAAATCATTTTCGTCCTTACCTCTATGGCAAGAAATTTACAGTAATCACAGACCATCGACCACTAGTATCCTTATTTGTAAATCGCAACCCCTCCCCTAAACTAACAAGAATCCGCTTGGACTTAATGGACTATGACTTCGAAATAATATACAAACAAGGTAAAACAAACACTAACGCAGACGCCTTATCACGCATAAAACTTAACTCAGAAAACCTTAAAGAAATGATACCCAAAACAATAAACATCATGACACGAAGTAAAACTAAAACATTAAACAACCCTGTAAATGACTCAGATAGCTTTCCACATCAGGTCTGCAACAACTGTATACATAACATAAGCGGTGCATATTTTTACCGATTGCAGTGTCATAAAGCCAATAGTTTATTACAACGTTTGGAAAATGTTCTTGCTAAACCTGTGGAACCTGCAGAACCTGAGGAATCACCGCTAGCAGATACTATGAAATCATCTTATCCAAACTATGATACAATTGAAACATTCGATTCGAGGAATgatatcaaaaaatcaatttcatcctTTTTCATTGAATTGGCTCCCGACAAAACTGATCCCGATCAAAATGACAATGGAACAAATGAAGAGGAGGAAAATATGAGTGTTGAGTTCGATGGAATACAGTATCAAATCGATTCAGAAATATTTCATTTAAGTACGGAGGATGAAGGACccgatgaaaatcaaatcaatgaagatgCAGAAAACCAATTCGATGAAGGTGACGAAGACAATCGAGTGACTGAAATGGATGAAGATAATGCAAGCGCTCCTGCAGATCTAGTTTCAGAAAGTGTTGAAGGAGAGGAAGATGAATTGAAGTCCAACATGAAGCTCGAGGAAATTCAAATAGAAATTCTTGATAACAATGTTCAAAATTCAAATGATAGGACACAAAGCGGTACGAAAAATGTGCCGAATCGTCCAAGAAACCAAAGGAGAAAGGGAGAagctacaacaaatgatttcagATGTGAACTTTGTGATGCGAAATTTACTAAAGTACAAAGTCTTAAACGTCATGTGAAAATTCACCAAGCAGATCAACGAAATAAATTGTGTTCATTTTGTGGTAAAGCATTCACAAGAACTGACGAGATAGCGCGACATATACGAACTCATACAGGTGAACGTCCTTACGCGTGTAAAATTTGTCCTAAACGGTATAAACAAACCTCTGAACTCAATGAGCACTTACTAACACACTCGAGagaaaaaaagtttatttgtCCAATATGCGGAAACGTATTGCAAACACGTAACGGTTATTATGTTCATATGCTTATACATCGCGGAGAAAAACGGCATCGCTGCGATAAGTGTGGCAATCGATATGTGACATCAGGTGAACTAATCTCGCATAAGCGACACATCCACGATAAGGTCAAACCTTATCGTTGTACTATAGGAGATTGCGATCGATGCTTCACAACAAAACATTCACTCGAGATTCATGAGAGGGCACATACAGGCGAAAAACCATTTAAATGTTCCATATGTACAAAATGTTTCTCAGGAAAACCTTCACTTCAAGATCATTTGCGACTTCATTCCGGATCGGCTCCATACAAGTGTAGTATATGCGATAAAGGTATTAACTCTTACCAGGGCTTGAAGAAACACATGCAAGGACATGAAGCACGTGGTGAGACTGAGAGCAATCCAGTTCTGACCGAAAATGATTTGTTTGAAACGATAGATAGTGGGAGATCAGATACAATTAAACAGGGTTTAGAAGATAGTGGTATAGATGGATTTGAACATTTAAATAGGAGCTTATTAAAAGTTCAACATACTATAGAAAACATTacaaaagaagaagaattgtaTATAATAGAAGAAGTGAAAAATGCGGAAACATGA
Protein Sequence: MIDNPNRGIGTATTKIETTATIETTTTTTKIHTTITEQTTHKDPDRTTTTKDTTTIKTVAPGAYKKTERWNKLKEVLNINSADPEAKTSIETICKEYHDIFHIEGEKLTCNDFYKQHLQTTDNSPVYIKNYRMPHAQTAEINKQVQELIDKDVIEPSTSPYNSPMLIVPKHSNDDTKKWRLVVDYRQLNKKLVNDKFPLTRLDDILDRIGRAKYFSTLDMTSSFHQIELDRESRPMTAFSSSNGHYQFKRLPFGLKISSNSFQRMLTIALSGLDANAFLYVDDIIVFGCSLKHHNENLRKTFDRLRKYNMKLNPSKCNFIQSEIVYLGHLITNKGVTADPSKCAAVNNYPLPQNADDVRRFVAFCNYYRRFVQNFAAIAKPLNDLLKKNKKFEWNEKCQEAFQTLKDSITSPPILQYPDLDKEFILTTDASDYALGAVLSQGTIGEDLPISYASRSLTKCETNKSVVEKELLAIYWGINHFRPYLYGKKFTVITDHRPLVSLFVNRNPSPKLTRIRLDLMDYDFEIIYKQGKTNTNADALSRIKLNSENLKEMIPKTINIMTRSKTKTLNNPVNDSDSFPHQVCNNCIHNISGAYFYRLQCHKANSLLQRLENVLAKPVEPAEPEESPLADTMKSSYPNYDTIETFDSRNDIKKSISSFFIELAPDKTDPDQNDNGTNEEEENMSVEFDGIQYQIDSEIFHLSTEDEGPDENQINEDAENQFDEGDEDNRVTEMDEDNASAPADLVSESVEGEEDELKSNMKLEEIQIEILDNNVQNSNDRTQSGTKNVPNRPRNQRRKGEATTNDFRCELCDAKFTKVQSLKRHVKIHQADQRNKLCSFCGKAFTRTDEIARHIRTHTGERPYACKICPKRYKQTSELNEHLLTHSREKKFICPICGNVLQTRNGYYVHMLIHRGEKRHRCDKCGNRYVTSGELISHKRHIHDKVKPYRCTIGDCDRCFTTKHSLEIHERAHTGEKPFKCSICTKCFSGKPSLQDHLRLHSGSAPYKCSICDKGINSYQGLKKHMQGHEARGETESNPVLTENDLFETIDSGRSDTIKQGLEDSGIDGFEHLNRSLLKVQHTIENITKEEELYIIEEVKNAET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -