Basic Information

Insect: Odontomyia ornata
Gene Symbol: prg
Assembly: GCA_963969285.1
Location: OZ017740.1:296263691-296269209[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.062 26 8.6 0.9 1 23 187 209 187 209 0.86

2 10 0.31 1.3e+02 6.4 1.4 1 23 215 238 215 238 0.94

3 10 0.00045 0.19 15.4 1.5 1 23 244 266 244 266 0.95

4 10 2.4e-08 1e-05 28.8 1.6 1 23 272 294 272 294 0.98

5 10 1.4e-06 0.0006 23.2 1.8 1 23 300 322 300 322 0.97

6 10 2.4e-05 0.0099 19.4 2.2 1 23 328 350 328 350 0.98

7 10 0.0015 0.61 13.7 2.2 1 23 453 475 453 475 0.97

8 10 8.1e-05 0.034 17.7 1.4 1 23 481 503 481 503 0.93

9 10 0.00024 0.1 16.2 2.8 1 23 509 531 509 531 0.98

10 10 8.7e-05 0.037 17.6 0.3 1 23 536 558 536 558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.062	26	8.6	0.9	1	23	187	209	187	209	0.86
2	10	0.31	1.3e+02	6.4	1.4	1	23	215	238	215	238	0.94
3	10	0.00045	0.19	15.4	1.5	1	23	244	266	244	266	0.95
4	10	2.4e-08	1e-05	28.8	1.6	1	23	272	294	272	294	0.98
5	10	1.4e-06	0.0006	23.2	1.8	1	23	300	322	300	322	0.97
6	10	2.4e-05	0.0099	19.4	2.2	1	23	328	350	328	350	0.98
7	10	0.0015	0.61	13.7	2.2	1	23	453	475	453	475	0.97
8	10	8.1e-05	0.034	17.7	1.4	1	23	481	503	481	503	0.93
9	10	0.00024	0.1	16.2	2.8	1	23	509	531	509	531	0.98
10	10	8.7e-05	0.037	17.6	0.3	1	23	536	558	536	558	0.98

Sequence Information

Coding Sequence: ATGGGTAGGTACTACCAGATCCCGCTTGAAGAAACATCGAAAAGATACACCGCCTTTGTGACCCATGAGGATCACTTCGAATTTATTGTTGTGCCGTTCGGACTGGTCGCAAAATCAAATGGGCTCCCTACAAGCATATGCCACACCTGCCTATACTACACCGAGACATTCTGGGAATTTAAATCCAGCGTACGAAAATGTGAAGCCCGCCTGCAAAATTATGTTGCCTCCTTGGGAATTCTCGGAAGCGTTCAATCGCCACTAAACGAGCATGGAATCAAACAGGAAATCGAAGATGAACCCATCGAAGACTACACACGGACAATACCCGGTGATACCAGCTTGGTCACAGTTGTCGATCCAAATCAGGACTATGAAAGTTCCGATGATAGTTTCTCAATTGATTCCGAGAATGAATTCGCTGAACCTGAATTGGACCCTAAAGTCGGCGTGGAAAAGATTCTTCAAGGAGATGCAGTTGAAATAGTGAATGAAGTGGAGGAGAAATGTAATCAAGCATTGAACGATGCAATTGCGGAGGCTGTGGAGAGGAATGTTTATTTGTGTCAATATTGTGATATGGCGTTTACAACGCAAGTGGAGTGTACTGTGCATGAAGGAAGTCACGATCAAGCAAATCCGTACAGTTGCAATTATTGTGTGTTCAAATGCTCCAGCCGTCAAATTTTAATTGCCCATATCAAAGATGTTCATGAGAATGACAGACCGTATGTGTGTATTCAGTGCCATAAAGGATTCGGTAGAAGATCAGATTTGAAGAAGCATACGATAGTGCATACTGGAGTCAGGCCGTTTACATGTCCTGTTTGTAACAAAAACTTTTCTAGGAACACAAACCTGACGAAACATCTGCGGATACACACCGGTCTCAAGCCTCATGTGTGTCAGAAATGTCCTCGATCGTTCACAACCACAGCGGATTTAATGCGTCATCAGCGGGTACACAACGATAGCAAGCCTTTCCAATGTCCTAAATGCCCCTCGGCATTCACTCGTAAAGATAAACTGCTCCATCATGAGCGATCGCATATGAGGAAAGAGAAGCAAAACGTTGTAGTTCCCGGGCTCAACTTGAGTGAGTCCGCCGTAACACCTGCCAGGCACCATGAGGGCAATGGCCATGATATGGAAAACATGGTAATATCACTGGACCCATACACGGACGTGAACCAAGGAGAAACAAGTGCTCATAACACTTCAGCCGATTCGCTGCAGAACACACCCAAAAAGCCAAACCAAATTAATCATCCTCCGGGCCAAGAAACGCGTCCTCAAGAACATGTTACAGGCGACGTTGTGTTGAATATCAATTCTGGCGATGACTACAACAATGTTTACTCCTGCGATTACTGCCCACAGAAGTTCACTCTATTTTCTGCGCTGATACATCACAACAGCACCCACAACAATTTCAAGGATCACGTTTGTCCGGTATGTTCGAAACGTTTCATGAGGAAGCGAGAACTGCAGCGGCATTCAGTCATCCATACTGGTCTGAAACCCTACTCCTGCCGCTTTTGTAACAAACGATTCAACCGAAAGGATAAAGTCGTTCGGCACGAACGAATTCACACGGAAGAGAAGTTTAACTGTACGCAGTGTGACTTGGGATTTTCCAAGCAGGAGGCTTTAGAAATGCATCTGAAAGTACACGAGCTGAATAAGgagcaacagcagcagcaacaacaacagcaacaccACCATCAACAATATCAACAGCACCACTATCCACAACCGGGCCAGCACCCGCAATTCCATTTTCCTCATCCAGGACAACCACCATTGCCTCCCCATCATCCGTACTATCATCACGGTCAACAACAATATCAACAGCATCATTTGCCGGAGAATATCCTTCGTGACCATCGACCAAGCAATGGAGGACCCCCTGGCGGATTGTTGCCTTTGCTTCCGAATGTGTTCATGCCACGCTTTATGCCACCACAAATGAATTTCTACAATGAATTACGAACAGATGATTGA
Protein Sequence: MGRYYQIPLEETSKRYTAFVTHEDHFEFIVVPFGLVAKSNGLPTSICHTCLYYTETFWEFKSSVRKCEARLQNYVASLGILGSVQSPLNEHGIKQEIEDEPIEDYTRTIPGDTSLVTVVDPNQDYESSDDSFSIDSENEFAEPELDPKVGVEKILQGDAVEIVNEVEEKCNQALNDAIAEAVERNVYLCQYCDMAFTTQVECTVHEGSHDQANPYSCNYCVFKCSSRQILIAHIKDVHENDRPYVCIQCHKGFGRRSDLKKHTIVHTGVRPFTCPVCNKNFSRNTNLTKHLRIHTGLKPHVCQKCPRSFTTTADLMRHQRVHNDSKPFQCPKCPSAFTRKDKLLHHERSHMRKEKQNVVVPGLNLSESAVTPARHHEGNGHDMENMVISLDPYTDVNQGETSAHNTSADSLQNTPKKPNQINHPPGQETRPQEHVTGDVVLNINSGDDYNNVYSCDYCPQKFTLFSALIHHNSTHNNFKDHVCPVCSKRFMRKRELQRHSVIHTGLKPYSCRFCNKRFNRKDKVVRHERIHTEEKFNCTQCDLGFSKQEALEMHLKVHELNKEQQQQQQQQQHHHQQYQQHHYPQPGQHPQFHFPHPGQPPLPPHHPYYHHGQQQYQQHHLPENILRDHRPSNGGPPGGLLPLLPNVFMPRFMPPQMNFYNELRTDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01376125; iTF_00793785;
90% Identity: -
80% Identity: -