Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017740.1:51429004-51445884[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.097 41 8.0 0.1 1 23 297 320 297 320 0.97

2 16 0.082 34 8.2 0.7 1 23 365 388 365 388 0.94

3 16 0.007 2.9 11.6 0.1 2 23 456 478 455 478 0.89

4 16 0.0012 0.49 14.1 0.1 1 23 489 511 489 511 0.98

5 16 0.095 40 8.0 5.2 1 23 517 540 517 540 0.90

6 16 2.7e-05 0.011 19.2 4.3 1 23 592 614 592 614 0.98

7 16 0.071 30 8.4 1.4 1 23 620 643 620 643 0.94

8 16 4.1e-05 0.017 18.6 1.6 1 23 654 676 654 676 0.99

9 16 0.0003 0.12 15.9 1.1 1 23 682 704 682 704 0.96

10 16 0.00027 0.11 16.0 0.5 1 22 710 731 710 733 0.91

11 16 0.00026 0.11 16.1 0.2 1 23 741 763 741 763 0.98

12 16 3.9e-06 0.0016 21.9 1.4 1 23 769 792 769 792 0.98

13 16 7.7e-05 0.032 17.8 0.8 1 23 799 821 799 821 0.99

14 16 0.17 71 7.2 0.0 1 23 827 850 827 850 0.92

15 16 0.00052 0.22 15.1 1.3 1 23 860 882 860 882 0.99

16 16 3.7 1.6e+03 3.0 0.5 1 23 888 911 888 911 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.097	41	8.0	0.1	1	23	297	320	297	320	0.97
2	16	0.082	34	8.2	0.7	1	23	365	388	365	388	0.94
3	16	0.007	2.9	11.6	0.1	2	23	456	478	455	478	0.89
4	16	0.0012	0.49	14.1	0.1	1	23	489	511	489	511	0.98
5	16	0.095	40	8.0	5.2	1	23	517	540	517	540	0.90
6	16	2.7e-05	0.011	19.2	4.3	1	23	592	614	592	614	0.98
7	16	0.071	30	8.4	1.4	1	23	620	643	620	643	0.94
8	16	4.1e-05	0.017	18.6	1.6	1	23	654	676	654	676	0.99
9	16	0.0003	0.12	15.9	1.1	1	23	682	704	682	704	0.96
10	16	0.00027	0.11	16.0	0.5	1	22	710	731	710	733	0.91
11	16	0.00026	0.11	16.1	0.2	1	23	741	763	741	763	0.98
12	16	3.9e-06	0.0016	21.9	1.4	1	23	769	792	769	792	0.98
13	16	7.7e-05	0.032	17.8	0.8	1	23	799	821	799	821	0.99
14	16	0.17	71	7.2	0.0	1	23	827	850	827	850	0.92
15	16	0.00052	0.22	15.1	1.3	1	23	860	882	860	882	0.99
16	16	3.7	1.6e+03	3.0	0.5	1	23	888	911	888	911	0.88

Sequence Information

Coding Sequence: ATGACGGCATTGAAGATTAAAAACTGCCCATCAGATGCCAACCACTTCGCTATGAAATCCAATTATTGGAGAATTTGCCGAAGACGTCAAAGTGACATTGAATTCAAAGGCGCAAACATTTTGTGTATCAACAAGTTTGAGGTTTTCATGGAAATTTCGAGTAAAATGTTACCCGGAGCGATTTGTCGGACGTGCTTAACAACAAATGGTGCAATGTTGAATCTGTTCGGCCCAAACAGCATTCAATTAGATCCGGGAAAGGAGACAGTAGCCGATTTCGTGGGATTATTGACAAGATCAATgGTGGAAGAAGATGATGGATTACCAACACAAATATGTCAAGCATGTTACCTTGAAATCCAACGAGCGTTTATCCTTAAAACAAAGTGTGAACGTTCGCTCGCTGTTCTAACTCAATTGAGAAATGTTAAGATAAAAATCAGAAAACTTAAATCGGATTCCAGTCCTGATACAAGTCGAAAGAAACCAATGTTTTATATGAATGGTCTAGCACATAATAAAGTCTCAGATCTTTCAGATAAAGCTGTAATATCAGTGACATCTAGTGAAGCCGATACAATGGAATTCGATGCAAtgaatatatttaataaaaaaaatacatcatGTACGACAAAATATGTCGAATTTCTGGATGATCCTCTGAATTTAATAGAATTCGACCAATTGGGAGGGTCCCAGCCAATGACTGTCAACGACATTGATTTAGATGGAGTAGTAATAAAGCAAGAAGTTGACTCGGATGTGGCTAGCACAATGGATGACGATACGTTAATTACATTTGGCGACAACTTGATGAAACATACAACAGCGCATAATGAACCAAATGTTAATAATACCACAAATAATAGTGCAGTTGAAGAGCAGAACTTCGAGTGTCCTGCGTGTCCGTATGTTCATATATCAGCAGAGGGGCTGGAAAAACATATGATAAAGAATCATATGAATGAAAATATGTGTTCTATTTGCAGTAAAGATATAAGCGGAAACGAGAAAGAACATTTTGCACGACATATTGGACCACATGTGGACTATGATGAAATCATTGAAGGAACAACGTTAATTGGTGGTGATTATCAGTGTTGTTTCTGCACGGAGCTTTTTAAATTGCGCGTAGATCTTGAAAGTCACATTGAAGCTGCTCATCCATCTCACAATCGAGTGGTTAAAACGGAACAAACACCAGCAACAACAACTGTGGAGGGTAGTGTTTTGAACAAAATCGACGATATTTTCAACGAAATCATCGAGGAAACCATGGATGATTATCCAGCGAAGATGCCAGCTGCGAATGTGAATATTCCGATCAAAACTGAAGTGAAAACTCCAATTCTCAGTCGTTCTGTTCGATGCGATGTTTGTGAAAAATCATTCGTTAATGAAGAGGAATTAGACTTGCATGTTAGTTTCATGCATGCAGTAAAGAATGCAAATGGAGAAATTGTTTTCAAATGCCCTCAGTGCCCACAAACGTATGCTGACAAAGCGGTTTTCGTTGATCACATTAAATTGCATGAGACCGGCAAGCCTTATCGATGTGACATTTGTCAACAGACGTTCCGATTCAAGCGCAATCTTGATTGCCATGTGCGTTTTAAGCATTGTCCTGAATGTAAGGGAGTGAAAACTGCCAACTGCAGTACATGCTGCGTTAAATTAGGTCCGAAACAACGATCAAAACAATGTCCTGAATGCAAAGGAGCTAGAAACATTCCTTGTGACACGTGTGCGGCGAAAGTGGGCCAAAAGCAAACATTCGAATGTGATCTGTGTTTCAAGGCGTTTTCGAACAGATCAACACTGCATCGTCACAAACGAATGCATTTACAAGACAAACCGTTCAAATGTGAACTGTGCTCACAGAGCTTCAACTACAAGCAAATTTTGAATCTGCACGTGAAAGAAAAGCATGGCCCAGACGCGGTAAAAGTTGAATCGGAATATAAATGCAAATCTTGTTCGATGGTTTTCACGCGAAGATTAGAATTGATTATGCACATGAAAACACATGACACAACGAAAATACACACGTGTCAATATTGTCCGCAAAGCTTTGAACTGTACAGTCTTTTGGTCCGGCATATGGAAGAGCATATAAACGCAGATGGTTTCCAATGCACAGAGTGTTCGGAAAAGTTCTCCACTGAGGCGAGCTTCAAGGCGCATATAGTCGACAAGCATGAAACGAAACAAGTAGCATCATTTCAATGCGGTGAATGTAATATGGAATTCACAGACAAAAACCTTTTGGACGAGCATGCTCGATCTCACGCTAACGACAAACCATTCGAATGCGAAATCTGCAAACAAAGCTTCCGATACTCGCAAAGTCTTGCTCGCCATATAAAAACATATCATACAAAGCAGCTTCAAATGTACCAATGCCAGCTTTGCCCGCTAACTTTCCAAGATCGCTCTGAGCTAGTGAATCACTTCAGAAGTCATACCGTTGAAAAAACGTATGAATGTGAAGTGTGCGCCGAAAAATTCCCAGACAAATTAAGACTCGGAGCACACATGGTACTGAAGCATGATGCGAAAAGCGCGCAGAAGCAATACTTCAAATGCGAAACTTGTTCAAAGACGTTTTGGAACAAGGGCCTCTATGAATCTCACATGGAAACACATAGGATGGAGAGCACCTTTTCATGTGAATTGTGTAGTCTAGTGTTCCTTTCAGGGCAGCTTCTGAAGCAACATTTCGAAAAAATGCATCAAGGTGAGATAAACGATATGCTGCCACAGTTCTTACAACCATCCGATTTACAAAATGATACAATTTTGCTTATCAACAACACAAACATAGTTTACGAGAATAGCACAAGTGATAACAATTTTGTATTCAGTGATGCATTTCTTAACAGTGATCAAATGATAGGTATTCAGGGAGCAGAATCAATGATCAATGACTTGTTCGATGAATCTAGTATTGAGGTTGCATAA
Protein Sequence: MTALKIKNCPSDANHFAMKSNYWRICRRRQSDIEFKGANILCINKFEVFMEISSKMLPGAICRTCLTTNGAMLNLFGPNSIQLDPGKETVADFVGLLTRSMVEEDDGLPTQICQACYLEIQRAFILKTKCERSLAVLTQLRNVKIKIRKLKSDSSPDTSRKKPMFYMNGLAHNKVSDLSDKAVISVTSSEADTMEFDAMNIFNKKNTSCTTKYVEFLDDPLNLIEFDQLGGSQPMTVNDIDLDGVVIKQEVDSDVASTMDDDTLITFGDNLMKHTTAHNEPNVNNTTNNSAVEEQNFECPACPYVHISAEGLEKHMIKNHMNENMCSICSKDISGNEKEHFARHIGPHVDYDEIIEGTTLIGGDYQCCFCTELFKLRVDLESHIEAAHPSHNRVVKTEQTPATTTVEGSVLNKIDDIFNEIIEETMDDYPAKMPAANVNIPIKTEVKTPILSRSVRCDVCEKSFVNEEELDLHVSFMHAVKNANGEIVFKCPQCPQTYADKAVFVDHIKLHETGKPYRCDICQQTFRFKRNLDCHVRFKHCPECKGVKTANCSTCCVKLGPKQRSKQCPECKGARNIPCDTCAAKVGQKQTFECDLCFKAFSNRSTLHRHKRMHLQDKPFKCELCSQSFNYKQILNLHVKEKHGPDAVKVESEYKCKSCSMVFTRRLELIMHMKTHDTTKIHTCQYCPQSFELYSLLVRHMEEHINADGFQCTECSEKFSTEASFKAHIVDKHETKQVASFQCGECNMEFTDKNLLDEHARSHANDKPFECEICKQSFRYSQSLARHIKTYHTKQLQMYQCQLCPLTFQDRSELVNHFRSHTVEKTYECEVCAEKFPDKLRLGAHMVLKHDAKSAQKQYFKCETCSKTFWNKGLYESHMETHRMESTFSCELCSLVFLSGQLLKQHFEKMHQGEINDMLPQFLQPSDLQNDTILLINNTNIVYENSTSDNNFVFSDAFLNSDQMIGIQGAESMINDLFDESSIEVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -