Oorn007900.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- ZNF526
- Assembly
- GCA_963969285.1
- Location
- OZ017738.1:95780929-95783077[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.002 0.86 13.3 0.2 3 19 105 121 104 124 0.94 2 14 0.0063 2.7 11.7 0.2 3 23 133 154 131 154 0.94 3 14 0.035 15 9.4 2.0 3 23 162 183 161 183 0.95 4 14 1e-05 0.0043 20.5 0.4 1 23 188 211 188 211 0.95 5 14 0.021 8.8 10.1 2.8 2 23 216 238 216 238 0.91 6 14 0.0019 0.79 13.4 1.5 1 23 244 266 244 266 0.97 7 14 0.00042 0.18 15.4 0.8 1 23 272 294 272 294 0.96 8 14 6.8e-05 0.029 17.9 1.1 3 23 302 322 302 322 0.99 9 14 0.0019 0.82 13.4 0.6 1 23 327 350 327 350 0.91 10 14 0.0012 0.49 14.0 1.1 1 23 365 387 365 387 0.99 11 14 4e-05 0.017 18.7 5.3 1 23 394 417 394 417 0.97 12 14 0.0019 0.79 13.4 2.0 1 23 423 445 423 445 0.98 13 14 2.3e-06 0.00095 22.6 1.3 1 23 451 473 451 473 0.98 14 14 0.054 23 8.8 0.2 1 23 479 502 479 502 0.92
Sequence Information
- Coding Sequence
- ATGGCATTACAGAAAAATTATACCGTTTCACCTAAAATTGAGCAGATATCTTTGGTTATTCAAAGTTACGTTGAAGAAGATGAATATGATGACTCGAATGATGCAAGACAAAATACGGCTGAAGATAGTAGAATCGGAAACTTATTTGAAGGAAGCAGTTCAAATATGGTTGATAACACCAGTGATTCTGATTCCAATTCAGTTGGTTCACACCAAAAAGTGCCTAGCGAAGAAAACAGCATGAAAAAGCTACACAGCAACGGAGTAAAGAAATCGGTGAATGAAACACAAAGAAAGGGGTCACAAATTTTATGCAAATATTGTGGGAAAGGGTTCAAATCCGCTCGAGGATTGTTATTACACAAAGGAAAATGTGATGCCTACAATGAAGTTAATTGTCGAATTTGCACATCTGAGTTCGAAAATAAGGGGCAACTAGAAAGTCATATTCAAGAGTCACACCCACATGGGGGTCCGCCGATGTGCCCAGTATGTTCAAGGACTTTCACGGAATTTAGTAAAAGGGACCATCATATTCGTCAAATCCACAGCAATGTGCAATTTCCATGTTTAGTATGTGATAAGGCATTTAAGCGCAAGCAATATTTAACATTACATATTAATGGACAGCACACTGGAGCTGCTGAGTGTAAAAGCTGCAATAAAAAGTTTTCCACCGTGGGAAAACTTCGCTATCATTGGACTCATGAGCATATTGAGAACATGAAATACAAGTGTAAATATTGTGAGAAACCGTTTGCCTCAAAATTTATCATGCGTGAACATGAAAGATCCCATACTGGCGAGCGCCCCTTTCTATGCAGTCAGTGTGGCGCAGGCTTCCGTTATCAGAATAAATACGTGGAGCATATGAAAACGCACGATAAACAACATATTGTTGGATGTGATGATTGTGGGTTAGTATTCAGTACAGATCGCCAGTTAAAGTACCATAGACGAAAACATTTGACTAAAAAACATGCGTGCGAGGTATGTGGCGAAGCATTCTCTTACAAACTTGATCTCTATACTCATAGATACAATGAGCATAAAGTATCTAAAATCATACCTAGACGTCAAGTCGACTATCCCTTCAAGTGCCCTCAATGCAGCAAAGGATTTTTAGTGCTAACAAGTCTTTCCAAGCATCTTAAAACACACATGGATAACGAAAGGAAACATGTTTGCCCGCATTGCGGAAATAGGTATAAACGGTCAGACCACCTAAATTTGCATATAAAACGCATGCATTTGAGAGTGTTTGAACATAAATGCGACGTTTGTGGAAAAGAATACTTGGAGAAGTGTCAATTGAAAGCACATATGATAGTACATGATAGCGCTAGACCATTCACGTGCTCTAAATGTCCTGCATCGTTCAAACGTCAACGTGCTTTAAAAGATCACATGCTGAAACATGAAGGGAAAAAGGAATATGCCTGCGAGATATGTGATATGCGCTTTTTCAATCGAACAGTAGTTGTTCTCCACACCCAACGAGTTCATTTAGATTCCCAGAAAAAGTTTATGTCTGAATTGATTCGCAACGAAGTAGAAGACGCTAAATTAATTATGGAGGAAGATCAAGAATCTGCACAAATCTTCCgttaa
- Protein Sequence
- MALQKNYTVSPKIEQISLVIQSYVEEDEYDDSNDARQNTAEDSRIGNLFEGSSSNMVDNTSDSDSNSVGSHQKVPSEENSMKKLHSNGVKKSVNETQRKGSQILCKYCGKGFKSARGLLLHKGKCDAYNEVNCRICTSEFENKGQLESHIQESHPHGGPPMCPVCSRTFTEFSKRDHHIRQIHSNVQFPCLVCDKAFKRKQYLTLHINGQHTGAAECKSCNKKFSTVGKLRYHWTHEHIENMKYKCKYCEKPFASKFIMREHERSHTGERPFLCSQCGAGFRYQNKYVEHMKTHDKQHIVGCDDCGLVFSTDRQLKYHRRKHLTKKHACEVCGEAFSYKLDLYTHRYNEHKVSKIIPRRQVDYPFKCPQCSKGFLVLTSLSKHLKTHMDNERKHVCPHCGNRYKRSDHLNLHIKRMHLRVFEHKCDVCGKEYLEKCQLKAHMIVHDSARPFTCSKCPASFKRQRALKDHMLKHEGKKEYACEICDMRFFNRTVVVLHTQRVHLDSQKKFMSELIRNEVEDAKLIMEEDQESAQIFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -