Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017742.1:107743377-107744897[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00073 0.31 14.7 0.1 2 23 152 173 151 173 0.93

2 12 0.093 39 8.1 0.4 1 23 179 201 179 201 0.97

3 12 0.00016 0.066 16.8 1.0 1 23 207 229 207 229 0.98

4 12 1.6e-06 0.00066 23.1 2.9 1 23 235 257 235 257 0.99

5 12 0.00017 0.071 16.7 1.1 1 23 263 285 263 285 0.98

6 12 4.1e-05 0.017 18.6 2.5 1 23 291 313 291 314 0.95

7 12 0.0014 0.6 13.8 0.8 2 23 322 343 321 343 0.97

8 12 6.6e-08 2.8e-05 27.4 6.3 1 23 349 371 349 371 0.98

9 12 0.0035 1.5 12.6 3.0 2 23 381 402 381 402 0.97

10 12 0.1 44 7.9 5.3 3 23 410 430 408 430 0.98

11 12 4.7e-07 0.0002 24.7 3.1 1 23 436 458 436 458 0.99

12 12 0.0002 0.084 16.5 0.3 1 23 464 486 464 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00073	0.31	14.7	0.1	2	23	152	173	151	173	0.93
2	12	0.093	39	8.1	0.4	1	23	179	201	179	201	0.97
3	12	0.00016	0.066	16.8	1.0	1	23	207	229	207	229	0.98
4	12	1.6e-06	0.00066	23.1	2.9	1	23	235	257	235	257	0.99
5	12	0.00017	0.071	16.7	1.1	1	23	263	285	263	285	0.98
6	12	4.1e-05	0.017	18.6	2.5	1	23	291	313	291	314	0.95
7	12	0.0014	0.6	13.8	0.8	2	23	322	343	321	343	0.97
8	12	6.6e-08	2.8e-05	27.4	6.3	1	23	349	371	349	371	0.98
9	12	0.0035	1.5	12.6	3.0	2	23	381	402	381	402	0.97
10	12	0.1	44	7.9	5.3	3	23	410	430	408	430	0.98
11	12	4.7e-07	0.0002	24.7	3.1	1	23	436	458	436	458	0.99
12	12	0.0002	0.084	16.5	0.3	1	23	464	486	464	486	0.97

Sequence Information

Coding Sequence: ATGAAATCGATCAATGCGCCCGAGATCCTTTCTAAGCTTTCAATATGTGTTGGCATCGTAGTGGAATCAAACAATTCATTTCCAGATAAAATATGTGATATGTGCTTAACAAAGTTAAATGATTTTTATGATTTCCGCGATCAGTGTGAGAACTCTACTAAAACATTATACAAGTTAAAGGAAAATGATCATATTGAACTCGAACGAATAGATTTAAAGACTGCCGCCCTAGAAATTGGAGAAAAGGATGAATATAATATTGAAGTGGGTACAAACCTAATGGTATTCAGTGAAGATGAAATATTGCTAAATGAATTACAAATATGTTCTGCTAAGACGGAGAAATCAAATAGTGCAAATATTCAAGAATCCTTGCAAATAGAAATTAATGATGTCATTAACAACGAAATCCAGGTACAAACAGAGGTTGCACAATTGAATGAAAAACGAATATCATGCAAAGTCTGTAGTACATCATTTGATAGCAAGGAAAGTCTTATAGCCCATGGAGATGTTCACATTGAAAAATCGCATTATCCTTGTGTCTTCTGTGGCATAGATTTTAAGCTTTTAAAATATCGTAACCGACATGTTGCACGTCAcgtttcagaaaaaaaatttgtttgcccTATTTGTAATGCTCGTTTTCACGAACGAAACTCTCTTCGTATCCACACTCGTATTCACTCGGGAGAAAAACCATTTCAATGCGAAAAATGTTTAAAACGCTTCACACAGCGTAGTCAGTTGAATACTCACGCAAGAACTCATAGTGACGAAAAACCATATTCTTGTGATATTTGCTTTAAACCTTTCTcaaatccatatttcatgcaactgcataaaaaaattcattcatcACATAAAGATTATGCATGTGAGCTTTGTAGTAAAGAGTTCACACTAAGAAGCCAACTTAACAATCACATGAACTTTCATCATGGAAATCCTGATAAGAAACTTCAATGTACAGAATGCGGTGAACTATTCTACCAGAAACAAACAATGCTGTATCACATGAATAATCATCAAGGAACCAAACCGCACAAGTGCACGTATTGCGAGAAATCTTTTCGGACACCTAGCCACCTACAAACGCATATTCGAACACATACAGGTGAAAAGCCTCCGCCGAAAGCTGAGTGCCATATATGCCACCGTGATATGTTCAGCGCTAGTGAGCTAAAGGTTCATCTACGAACACATACTGGAGAAAAACCGTTTGGATGTCATTTATGTGATAAACGATTTCTTCTGCATACTCATCTTGTAGTTCACATTAGAAGTCATACAGGCGAAAAACCATACAAATGTGAAATATGCGATAAAAGTTTTGTTACCAAATCATCCAGGAAAAAACATATGTTTACTCATAATGGCGACAAGAAATTTGATTGTGATATTTGTGGAAAGAGTTTTGCGCAAGCAGGTGTGAGGAATTCTCATCGCAAGCGACACAAAAGTTCGGCTCTTAAAActatagaaaaaaagaaaattgtacAGAAGAAAGGGGATAGTTGA
Protein Sequence: MKSINAPEILSKLSICVGIVVESNNSFPDKICDMCLTKLNDFYDFRDQCENSTKTLYKLKENDHIELERIDLKTAALEIGEKDEYNIEVGTNLMVFSEDEILLNELQICSAKTEKSNSANIQESLQIEINDVINNEIQVQTEVAQLNEKRISCKVCSTSFDSKESLIAHGDVHIEKSHYPCVFCGIDFKLLKYRNRHVARHVSEKKFVCPICNARFHERNSLRIHTRIHSGEKPFQCEKCLKRFTQRSQLNTHARTHSDEKPYSCDICFKPFSNPYFMQLHKKIHSSHKDYACELCSKEFTLRSQLNNHMNFHHGNPDKKLQCTECGELFYQKQTMLYHMNNHQGTKPHKCTYCEKSFRTPSHLQTHIRTHTGEKPPPKAECHICHRDMFSASELKVHLRTHTGEKPFGCHLCDKRFLLHTHLVVHIRSHTGEKPYKCEICDKSFVTKSSRKKHMFTHNGDKKFDCDICGKSFAQAGVRNSHRKRHKSSALKTIEKKKIVQKKGDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -