Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017741.1:20698815-20700554[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00011 0.047 17.2 1.0 1 23 178 200 178 200 0.98

2 10 2e-07 8.3e-05 25.9 0.3 3 23 209 229 208 229 0.99

3 10 5.3e-05 0.022 18.3 0.6 3 23 237 257 235 257 0.98

4 10 0.02 8.6 10.1 0.0 1 23 263 285 263 285 0.97

5 10 0.0014 0.58 13.8 3.2 1 23 291 314 291 314 0.96

6 10 1.8e-05 0.0074 19.8 2.9 1 23 320 344 320 344 0.98

7 10 0.00015 0.062 16.9 1.0 1 23 350 372 350 372 0.98

8 10 0.00014 0.06 16.9 0.6 1 23 378 400 378 400 0.98

9 10 1.9e-06 0.00079 22.8 5.3 1 23 460 482 460 482 0.98

10 10 4.5e-06 0.0019 21.6 1.0 1 23 485 507 485 507 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00011	0.047	17.2	1.0	1	23	178	200	178	200	0.98
2	10	2e-07	8.3e-05	25.9	0.3	3	23	209	229	208	229	0.99
3	10	5.3e-05	0.022	18.3	0.6	3	23	237	257	235	257	0.98
4	10	0.02	8.6	10.1	0.0	1	23	263	285	263	285	0.97
5	10	0.0014	0.58	13.8	3.2	1	23	291	314	291	314	0.96
6	10	1.8e-05	0.0074	19.8	2.9	1	23	320	344	320	344	0.98
7	10	0.00015	0.062	16.9	1.0	1	23	350	372	350	372	0.98
8	10	0.00014	0.06	16.9	0.6	1	23	378	400	378	400	0.98
9	10	1.9e-06	0.00079	22.8	5.3	1	23	460	482	460	482	0.98
10	10	4.5e-06	0.0019	21.6	1.0	1	23	485	507	485	507	0.98

Sequence Information

Coding Sequence: ATGAAATCATCTTATCCAAACTATGATACAATTGAAACATTCGATTCGAGGCATGataccaaaaaatcaatttcgtccTTTTTCATTGAATTGGCTCCCGACAAAACTGATCCCGCTGATCCAGATCAAAATGACAATGGAACAAATGAAGAAGAGAAAAATATGAGTGTTGAGTTTGATGGAGTAGAATATCAAATCGATTCAGAAATATTTCATGTAGATATGGAGGATGAAGAAGCCGAGGAAAATCAAATCAATGCAAGTGAAGAAAACCAATTCGATAAAGGTGACAAAGACAATCGAATGACTGAAATGGATGAAGATAATGCGAGCGCTCCTGTAGATCAAGCCTTGGAAAACATTGAAGGAGAAGAAGATGAATTGAAATCCAACATGATGCTCGAGGAAATTAGAATAGAAATTCTTGATAGTAATGTTCAAAATTCAAACGATAGGACGCAAAGCGGTACGAAAAATTTAACGAATCGGCCAAGAAACCAAAGAAGAAAGGGAGAAGCTACAACAAATGAGTTCAGATGTGAACTTTGTGATGCGAAATTTACTAAAGTACAAAGCCTTAAACGCCACGTCAAAATTCACCAAGCAGATCAACGAAATAAATTGTGTTCATTTTGTGGTAAAGCATTCATAAGAGCTGACGATTTAACGCGACATATACGAACCCATACAGGTGAACGCCCTTACGGGTGTAAACTTTGTCCTAAACGGTATAAACAAACCTCTGAACTAAATGAGCACTTACTAACACACtcgaaagaaaaaaagtttatttgtCCAATATGCGGAAACGCATTGCAAACACGTAACGGTTATTATGTTCATATGCTTATTCATCGCGGAGAAAAACGGCATCGCTGCGATATGTGTGGCAATCGATATGTGACATCAGGTGAACTAAAATCGCATAAGCGTCACATTCACGATAAGGTGAAACCTTATCGTTGTACTATAGGAGATTGCGATCGATGCTTCACAACAAAACATTCACTCGAGATCCATGAGCGGGCGCATACCGGCGAGAGACCATTTAAATGTTCTATATGTACAAAATGGTTCTCAGCAAAATCTTCACTTCAAGATCATTTACGACTTCATTTCGGATCGGCTCCATACAAGTGTAGTATATGCGATAAAGATATTAACTCTTACCAGGGTTTAAAGAAACACATGCAAGGACATGAAGCACGTGGTGAGACTGAGAGCAATCCAGTTCTGAACGAAAATGATTTGTTTGAAACGATAGATAGTGGGAGATCAGATACAATTAATCAGGGTTCAGAAGATAGTGGTACAGATGGATTTGAACAGTTACATGGGAGCTTAATAAAAGTAGTTCAGCATACTATGGAAAGACCCTTTAAATGTTCTATATGTACAAAATGCTTCTCTACCAAATCTTTACTTCAAGATCATTTACGTTTTCATTTCGGATACAAGTGTAGTATATGCGATACAGGTTTTAACTCTTACCAGAGTTTGAATAAACACATGCAAGGACATGAAGCACGTGGCGAGACTGAGAGCAATCAAATTGCGTCCGAAAATGATTTGTTCGAAACGATGGATAGTGGGAGATCAATTAAACAGGATTTAGAAGATAGTGTTACCGATGGATTTGAACATTTAAATAGGAGCTTACTAAAAGTTCAAGATACTATGGAAAACGTTATAAAAGAAGAATTTTATATAATAGAAGAAGTGAAAAATGAGGAGACATGA
Protein Sequence: MKSSYPNYDTIETFDSRHDTKKSISSFFIELAPDKTDPADPDQNDNGTNEEEKNMSVEFDGVEYQIDSEIFHVDMEDEEAEENQINASEENQFDKGDKDNRMTEMDEDNASAPVDQALENIEGEEDELKSNMMLEEIRIEILDSNVQNSNDRTQSGTKNLTNRPRNQRRKGEATTNEFRCELCDAKFTKVQSLKRHVKIHQADQRNKLCSFCGKAFIRADDLTRHIRTHTGERPYGCKLCPKRYKQTSELNEHLLTHSKEKKFICPICGNALQTRNGYYVHMLIHRGEKRHRCDMCGNRYVTSGELKSHKRHIHDKVKPYRCTIGDCDRCFTTKHSLEIHERAHTGERPFKCSICTKWFSAKSSLQDHLRLHFGSAPYKCSICDKDINSYQGLKKHMQGHEARGETESNPVLNENDLFETIDSGRSDTINQGSEDSGTDGFEQLHGSLIKVVQHTMERPFKCSICTKCFSTKSLLQDHLRFHFGYKCSICDTGFNSYQSLNKHMQGHEARGETESNQIASENDLFETMDSGRSIKQDLEDSVTDGFEHLNRSLLKVQDTMENVIKEEFYIIEEVKNEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -