Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017742.1:266102557-266107973[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.2e-05 0.026 18.1 0.8 1 23 161 183 161 183 0.97

2 14 0.00078 0.33 14.6 2.9 1 23 189 211 189 211 0.97

3 14 0.0003 0.13 15.9 0.1 1 23 300 322 300 322 0.98

4 14 0.021 8.8 10.1 1.3 1 23 328 350 328 351 0.96

5 14 8.9e-06 0.0037 20.7 4.2 1 23 378 400 378 400 0.98

6 14 0.018 7.4 10.3 0.0 1 23 412 434 412 434 0.94

7 14 0.038 16 9.3 0.3 1 23 440 463 440 463 0.92

8 14 0.087 37 8.1 1.2 2 19 471 488 471 489 0.95

9 14 2.7e-05 0.011 19.2 4.6 1 23 498 520 498 520 0.96

10 14 0.0079 3.3 11.4 0.6 2 23 526 547 525 547 0.97

11 14 2.3e-06 0.00097 22.6 0.3 1 23 555 577 555 577 0.98

12 14 0.0015 0.62 13.7 0.2 3 23 585 605 583 605 0.97

13 14 4.6e-05 0.019 18.5 0.5 1 23 611 633 611 634 0.95

14 14 0.0014 0.58 13.8 0.2 1 23 648 670 648 670 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.2e-05	0.026	18.1	0.8	1	23	161	183	161	183	0.97
2	14	0.00078	0.33	14.6	2.9	1	23	189	211	189	211	0.97
3	14	0.0003	0.13	15.9	0.1	1	23	300	322	300	322	0.98
4	14	0.021	8.8	10.1	1.3	1	23	328	350	328	351	0.96
5	14	8.9e-06	0.0037	20.7	4.2	1	23	378	400	378	400	0.98
6	14	0.018	7.4	10.3	0.0	1	23	412	434	412	434	0.94
7	14	0.038	16	9.3	0.3	1	23	440	463	440	463	0.92
8	14	0.087	37	8.1	1.2	2	19	471	488	471	489	0.95
9	14	2.7e-05	0.011	19.2	4.6	1	23	498	520	498	520	0.96
10	14	0.0079	3.3	11.4	0.6	2	23	526	547	525	547	0.97
11	14	2.3e-06	0.00097	22.6	0.3	1	23	555	577	555	577	0.98
12	14	0.0015	0.62	13.7	0.2	3	23	585	605	583	605	0.97
13	14	4.6e-05	0.019	18.5	0.5	1	23	611	633	611	634	0.95
14	14	0.0014	0.58	13.8	0.2	1	23	648	670	648	670	0.97

Sequence Information

Coding Sequence: ATGAACGTTTCCGGATTCCGTATTGAATGGGTAGAGGAGATTCCCTCCTCTGCGGAAATAGTGAGCGAAGAAGTTATTGGAATGGATACTGAAAATGACGAAGAAGTCGAGGGAGCTGAGGAATATCTAGTCGGCGAAGAAATCATATCGTCAGTTGATATGAACTCACTACCAAACAGTTTAGATCAGGTTGCAGCGGAAAATCTAATTTACATGGCGCAAGATGGACATGTACAAGCAATGGGTGATCTCATCGAAGAGCAGGTTGAGGAGACAGATAATGCAAATTACAATGAAGTACAATATTTCGAGTGTCAGGTGACGGAAGAAGTGATTACCGATGATTGGGTACAAAATCAGGGTGAAGAAAGGGTTGAAATTCCCGCCGATCAGCTTTGTAGCTCTACAGACAATCAAATTGTAACGGAAATTGAAGTTCCCTTGCCGACTGATCAAGACGAATACACAGCATTGCGGCCATATCCTTGTGATTTTTGTAGTCGACGATTTCGAAAGAAAGTCAGTTTAATGAATCATATGATTGCACATCAAAATGATCGTCCGCATGTTTGTAATTTGTGTGGCGCGCGTTATATTCGACGTAGTGATTTACATAATCACTTTAAGGTGCATGCTCACATGCCGGAACAGAATTTTGATGATATTGATGAATCTTTCCTCAATGCTCAATTTGAAATCAAACAAGAATCGAGAGGCCATGAATACTACGAACAAGAACAAATTGAAACTCCACCTCCCGCGAAAAATCGTAGTCGCGGTGGCAAACGAAAAGTGAAACAAGAAGAAAGTCACTATGTACATCAAGACCTTCCAAATGTTGAGTCTCAAATGCAAGAACAAATCGAACGCTATCCCGTCATGGATCCTCGAAAGCCATTTGTATGCCAACAGTGTGGTGTAGCTTTTGCTCGAGAAAAAGCCTTATTATCGCATTCAAGAATTCACGGTGGTGATTCACCGTATGAGTGTACATCATGCAATGAAATGTTTTGGGACATAAACATGCTAAACGACCATCAAAAGACACATCACTTTGAAGCTAGTAATTCGGAATATGAACCCGAAAATGATGAAGAAACTGATTCGGATAATGACTCCAAGTATGGAGAGTTTTATTGTAATATTTGTGGAATGTCGTTTCATCGAAAAGATTTGCTTAAACGCCATTCAAAGACGCATGTTAAAAAGGAAATTTATGAGGCTGATACCCGGCATGCTTGTACTGTTTGCGGCGAATCATTTCAAGAAGCACTGGATCTTCTGGCACACGCCGAGGTTCATGCCCGATTTCAACCATTTAAATGTACCCTCTGCGGAGAAACCTTCCTTGAAGAGGCAACAATCAAAAAGCATTTAAATAATGTGCATTCATCAGAGATGAACTCCAATTCGTGCAAATTGTGCGGAAAACAATGTCGTGATGGAAGATCATTGATGAAGCATGCATGGGATCACTCGCTCAAGAAGAATCATTCGTGCTCGATATGCGGAAAAACGTTTCATAATAAAGCAAGACTTAAACGGCATATGGTATCACATCGCAATAAATCTGTAAGATGTGACGTATGCAATGAAGAATTTCCTGATGGTCGGAGTTTAATGAACCACCGCCATTCGCACAATAATACATCTGGTCGACAATTTCCCTGCAACGAATGTGGCAAAACATTCGGGTCAAGAAGTTCACAACAAATTCATATTCGTATACACACTGGAGAAAGACCATATGGTTGCCGGTATTGTTATAAAGCCTTTGCTGATGGTGGAACGTTAAGGAAGCATGAACGTATCCATACTGGTGAAAAGCCTTACGCTTGTTCGGTATGTCCTCGCGCTTTTAACCAAAGAGTTGTTCTTCGCGAACACATCCGTTCACATCACTCAGCGCCCGATACTAAACGAGGCACGTCCTCAATGCCATATTATTGTACAGTCTGTTCAGAAATGTTTACAGCTTCGACGGATTTAGTTCAACATCTGATACAGCATAGTGATTTGAATACAGCAATGCAAAGGCAACCGGTGGAACTGGATGTTCAACACTATCGTCTAGCCAAATGCCGGCGCGCAGCTGCGGAATTAGATTGTGGTAGCGCACGTGTACGTGACTCTACTGCTATTTAA
Protein Sequence: MNVSGFRIEWVEEIPSSAEIVSEEVIGMDTENDEEVEGAEEYLVGEEIISSVDMNSLPNSLDQVAAENLIYMAQDGHVQAMGDLIEEQVEETDNANYNEVQYFECQVTEEVITDDWVQNQGEERVEIPADQLCSSTDNQIVTEIEVPLPTDQDEYTALRPYPCDFCSRRFRKKVSLMNHMIAHQNDRPHVCNLCGARYIRRSDLHNHFKVHAHMPEQNFDDIDESFLNAQFEIKQESRGHEYYEQEQIETPPPAKNRSRGGKRKVKQEESHYVHQDLPNVESQMQEQIERYPVMDPRKPFVCQQCGVAFAREKALLSHSRIHGGDSPYECTSCNEMFWDINMLNDHQKTHHFEASNSEYEPENDEETDSDNDSKYGEFYCNICGMSFHRKDLLKRHSKTHVKKEIYEADTRHACTVCGESFQEALDLLAHAEVHARFQPFKCTLCGETFLEEATIKKHLNNVHSSEMNSNSCKLCGKQCRDGRSLMKHAWDHSLKKNHSCSICGKTFHNKARLKRHMVSHRNKSVRCDVCNEEFPDGRSLMNHRHSHNNTSGRQFPCNECGKTFGSRSSQQIHIRIHTGERPYGCRYCYKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSAPDTKRGTSSMPYYCTVCSEMFTASTDLVQHLIQHSDLNTAMQRQPVELDVQHYRLAKCRRAAAELDCGSARVRDSTAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -