Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017742.1:219589366-219591662[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.16 67 7.3 0.9 1 23 58 81 58 81 0.94

2 15 0.00028 0.12 16.0 1.2 1 23 181 204 181 204 0.96

3 15 0.00025 0.1 16.2 0.4 3 23 214 234 212 234 0.96

4 15 0.0014 0.61 13.8 0.3 1 23 240 262 240 262 0.98

5 15 0.011 4.5 11.0 3.6 1 23 268 290 268 290 0.95

6 15 0.00018 0.077 16.6 0.3 3 23 363 384 361 384 0.97

7 15 0.00015 0.064 16.8 1.4 3 23 394 414 392 414 0.97

8 15 7.2e-05 0.03 17.9 0.8 1 23 420 442 420 442 0.98

9 15 4.8e-05 0.02 18.4 0.8 1 23 448 470 448 470 0.97

10 15 0.0024 1 13.1 0.9 1 23 520 543 520 543 0.96

11 15 1.8e-05 0.0075 19.8 0.1 3 23 556 576 555 576 0.97

12 15 0.25 1.1e+02 6.7 0.6 1 23 582 604 582 604 0.89

13 15 4.4e-05 0.019 18.5 3.4 1 23 610 632 610 632 0.95

14 15 5.3e-05 0.022 18.3 1.7 1 23 638 660 638 660 0.99

15 15 0.0054 2.3 11.9 0.1 1 17 666 682 666 682 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.16	67	7.3	0.9	1	23	58	81	58	81	0.94
2	15	0.00028	0.12	16.0	1.2	1	23	181	204	181	204	0.96
3	15	0.00025	0.1	16.2	0.4	3	23	214	234	212	234	0.96
4	15	0.0014	0.61	13.8	0.3	1	23	240	262	240	262	0.98
5	15	0.011	4.5	11.0	3.6	1	23	268	290	268	290	0.95
6	15	0.00018	0.077	16.6	0.3	3	23	363	384	361	384	0.97
7	15	0.00015	0.064	16.8	1.4	3	23	394	414	392	414	0.97
8	15	7.2e-05	0.03	17.9	0.8	1	23	420	442	420	442	0.98
9	15	4.8e-05	0.02	18.4	0.8	1	23	448	470	448	470	0.97
10	15	0.0024	1	13.1	0.9	1	23	520	543	520	543	0.96
11	15	1.8e-05	0.0075	19.8	0.1	3	23	556	576	555	576	0.97
12	15	0.25	1.1e+02	6.7	0.6	1	23	582	604	582	604	0.89
13	15	4.4e-05	0.019	18.5	3.4	1	23	610	632	610	632	0.95
14	15	5.3e-05	0.022	18.3	1.7	1	23	638	660	638	660	0.99
15	15	0.0054	2.3	11.9	0.1	1	17	666	682	666	682	0.94

Sequence Information

Coding Sequence: ATGAGTTCCGCAACAGTGTCTAATATAGAACACTATTTTAAAGAGGAAGATAGTATTGAAGTCTTGGACGATTTAAAACAAGAGTCAGTTTGTGAATCAAAGCAGATAGTCTTTGAGAATGACACTGCCAAGTGCGGTGAAGTATTGGTCGGGTACCAAGGCGATTTCACTTTTATTTGCGTTATGTGTAAGCAACATTTTATTGAACTAAGCTCATTTGGAAGTCACATAAAAGACTTGCATTTAAATCTGGATGCTTTAAATCCGATTTCAATCGAAAACGATTTTGTGGCGGATCCGCCATGTGAGGAAACAAGCATCATTTCCGTCTCACCACAGGGAGAAAGCAATCCGATACCGCAGTCTCCAGTATCAACAAATTGCCCAAGCCCAAGTTCTTCAAGCCCTATTCGAACTAAACCTGAACCCCTAACACTAGATACTGTTGAATCCTCGGATGGCAATCTTAAGAAGGAAAATTTAGTGGACGAAGTTTCCAATTACGAAGAAAGCAGTTCAAATGCGACCAAAGTAGAGGAATTTATTTGCGGATACTGCGGGCGAAGCTACCAAGCGAGAAGCTCCTATAGGAGGCACATAAAGCAAAACCACTCTAAAGGAATGCCAGACCAGATTATTTGCAAATACTGTTATAAAGAATTCGAAGATTTGAAACAATTAGAAACACACGTGAGCACACATACGGGACCAAAGCGTTATGTTTGTCCACTGTGCCCCAGGCTATTTAACAGCAATCAAACACGTCAGTCTCATATTAACGTACACAATGGCGAGCGTCCTTACAAATGCTCTTACTGTCCAAGAACTTTTGCGGATGCATATACTTGTGACAAACACAAACGTGACCATCCTGAAGTAGCGAATAAGAGTGAAAGCGAAACGGAATCGTCACCACCAATAAGTATTCCAGATCCGATTCGCAAGGGACCTGAAGTCATTATTGTAGATACTGTTGATTCTTCCGATTACAAAGACAACGAGAGTTCGACAGACGATGTTTCCAATTGCGCAGATAGCACTCCTGTCGCAATATCGTGTAACTCTACCCAAACAGGTGAATTCGGTTGCCCGATTTGCGGGCGCAGCTACCAAGCTTTGGGTTCCTACAGGAGACACATGAGAAAACAGCACCCTAACGGGGTTCCAGACCAGATTATTTGCAAATTCTGTCATAAAAAATTCGAAGATATGATAAAATTAGAAGCACACATTCGCACACATACGGAACGAAAACGTTATGTTTGTCAGTTCTGCCCCAAAGTGTTTATCAGCAATTATAATCGTCAGGTTCATACTAAAGTACACACCGGGAGGCATCCTTACAAATGTCTTCACTGTCCAAAAACTTTTGCCGAATCAGCTAATTGGGAAAAGCACCAAGATGAGCATCTTCAAGCAAAAAATGAGAGTGAAAGCAAATCGAAAATTGTAGCTTCGGACACTGTTGCCTCCTCAAATTGTGATGACAGTAAGGGTTTTTCGGACGATGTATCGAATTGCGAGAAAATATCTTCGACCTCTACAAAAGTACAAGAATTCATTTGTGCACAGTGCGGGCGGAGATACAGTACGAGGAACGCCTACACGGGCCACGTGAAGAGAAAGCACCCTGAAGTGAACAGGAAATTGGAAGATGAAAGGATTTGCCAGTACTGCGATAAAGAATTTGACGACGCGGGGCAACTTAAAGTGCACCTTGCCACACATACCGGTCGCAGGCGTTTTGTTTGCCCGTTTTGCCCCAAACTCTTTGCTGACAGAAAAGTTCGTCAGTTTCATATTAACACACATACCGGTGATCGTCCTTACAAATGTTCTTTCTGCCCAAAAGCGTTTTCCCACCCAACTAATCTTCTGAAGCATGAACATGCTCATCTTAAAATAATGAAGTATTCTTGCGATTACTGTGACAGACGTTTCGTACAATTATCGTCAAAGAAAGTTCACGAAAGAACGCATACAGGCGAGAAACCATTCCAATGCGAAGAATGTGGAGAACGCTTCATATCGCATAGCCTTTTACAATTCAAATCTGCTCAAGGATCATATGCCAATTCACACGAAGGAACGACCTTATCATTGCAAAATTTGCGGCAAAAGTTATCCAAGAAAAAAATCATTGCGGTCCCATCTGCAATTACACTCCAACAATAA
Protein Sequence: MSSATVSNIEHYFKEEDSIEVLDDLKQESVCESKQIVFENDTAKCGEVLVGYQGDFTFICVMCKQHFIELSSFGSHIKDLHLNLDALNPISIENDFVADPPCEETSIISVSPQGESNPIPQSPVSTNCPSPSSSSPIRTKPEPLTLDTVESSDGNLKKENLVDEVSNYEESSSNATKVEEFICGYCGRSYQARSSYRRHIKQNHSKGMPDQIICKYCYKEFEDLKQLETHVSTHTGPKRYVCPLCPRLFNSNQTRQSHINVHNGERPYKCSYCPRTFADAYTCDKHKRDHPEVANKSESETESSPPISIPDPIRKGPEVIIVDTVDSSDYKDNESSTDDVSNCADSTPVAISCNSTQTGEFGCPICGRSYQALGSYRRHMRKQHPNGVPDQIICKFCHKKFEDMIKLEAHIRTHTERKRYVCQFCPKVFISNYNRQVHTKVHTGRHPYKCLHCPKTFAESANWEKHQDEHLQAKNESESKSKIVASDTVASSNCDDSKGFSDDVSNCEKISSTSTKVQEFICAQCGRRYSTRNAYTGHVKRKHPEVNRKLEDERICQYCDKEFDDAGQLKVHLATHTGRRRFVCPFCPKLFADRKVRQFHINTHTGDRPYKCSFCPKAFSHPTNLLKHEHAHLKIMKYSCDYCDRRFVQLSSKKVHERTHTGEKPFQCEECGERFISHSLLQFKSAQGSYANSHEGTTLSLQNLRQKLSKKKIIAVPSAITLQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -