Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:369727304-369749111[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.8e-08 3.7e-05 27.0 2.8 1 23 295 317 295 317 0.98

2 14 0.00041 0.17 15.5 0.9 2 23 322 343 321 343 0.93

3 14 2.5e-06 0.0011 22.4 1.8 1 23 349 371 349 371 0.97

4 14 2.6e-05 0.011 19.2 0.3 1 23 375 397 375 397 0.96

5 14 4.3e-06 0.0018 21.7 0.9 1 23 403 425 403 425 0.96

6 14 0.0083 3.5 11.4 1.0 2 23 430 451 429 451 0.91

7 14 0.15 62 7.4 1.5 2 11 458 467 457 474 0.81

8 14 0.032 13 9.5 0.3 2 16 484 498 483 500 0.85

9 14 1.8e-05 0.0077 19.7 1.7 1 23 511 533 511 533 0.99

10 14 5.5e-05 0.023 18.2 0.3 2 23 538 559 537 559 0.95

11 14 2.6e-05 0.011 19.2 4.3 1 23 565 587 565 587 0.98

12 14 9.6e-05 0.041 17.5 0.2 2 23 592 613 591 613 0.95

13 14 8.7e-05 0.037 17.6 3.8 1 23 619 641 619 641 0.97

14 14 0.00027 0.11 16.0 0.3 2 23 646 667 645 667 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.8e-08	3.7e-05	27.0	2.8	1	23	295	317	295	317	0.98
2	14	0.00041	0.17	15.5	0.9	2	23	322	343	321	343	0.93
3	14	2.5e-06	0.0011	22.4	1.8	1	23	349	371	349	371	0.97
4	14	2.6e-05	0.011	19.2	0.3	1	23	375	397	375	397	0.96
5	14	4.3e-06	0.0018	21.7	0.9	1	23	403	425	403	425	0.96
6	14	0.0083	3.5	11.4	1.0	2	23	430	451	429	451	0.91
7	14	0.15	62	7.4	1.5	2	11	458	467	457	474	0.81
8	14	0.032	13	9.5	0.3	2	16	484	498	483	500	0.85
9	14	1.8e-05	0.0077	19.7	1.7	1	23	511	533	511	533	0.99
10	14	5.5e-05	0.023	18.2	0.3	2	23	538	559	537	559	0.95
11	14	2.6e-05	0.011	19.2	4.3	1	23	565	587	565	587	0.98
12	14	9.6e-05	0.041	17.5	0.2	2	23	592	613	591	613	0.95
13	14	8.7e-05	0.037	17.6	3.8	1	23	619	641	619	641	0.97
14	14	0.00027	0.11	16.0	0.3	2	23	646	667	645	667	0.95

Sequence Information

Coding Sequence: ATGAAAGATATGCTACTATTCCCGAAGAGACTTGCAGATGAATTCCAATCAAATATATGCGAGTATAATCTCAAGGAAGAAGAAACCATAGACAGGAAATTAATAAAATGCGAAAGTGACCAAAACGAGTCTGGCTTTGAAGTCTTAATTATTCATAGTGATGAAAAAGATGATAAAACTGAAACGCTTGTTGATGTTAAATTTGATGACATAGATGGATGCGACAACAAAACGAGTTTGGAAAACGAAACATGTTCAAAATATGATCAAGAGGACAATTTGAAGGAAAAGACAAGCGAAAAAACCATAGAGAAGCTGACAAAAGCAATGACAGTTTCTGATACACAGGATAATACACGCTACCAATATGGCGAAGTATACAAAACAGGCCAACATATTTCATCCGAACGGGAACGCGTGCGACATGAATGTGAAATTCTGTTTTCTAAATCGGCTGACTTGCAGAGCACTGGAGGCAATAACTCTGGTCTTAAAATATATGAATATGAAAATTGTGACGCGGATAATACACGCTACCAATATGGCGAAGTATACAAAACAGGCCAACATATTTCATCCGAATGGGAACGCGTGCGACATGAATGTGAAATTCTGTTTTCTAAATCGGCTGACTTGCAGAGCACTGGAGGCAATAACTCTGGTCTAAAAATATATGAATATGAAAATTGTGACGCGTTAGCTCTAGATAGGTCTCCCTTAAAATTGCATCTTGCAACTATTAACTCAACACTAAGTGAAAAGTATAGCAACAAATttttacatttaaattttaattctaACGAATGCGGTGAATATGATAAATCATTTCTTACATTACAAAACTTAAAACAGCAGGCAGCCTTCGATCAAAGTCTTAACCTCTATAAGTGCCATGAATGCGGGAAAGCCTTTAAGAGGAAACGAAACTTAAAAGAGCATATAGTTTCACATTCTGATTTATGTAAATGTCGTGAATGCGGGAAATCGTTTGGTACATTACAGGGCCTAAAAGAGCACGTAGCCTTACATGTAAATCCTGACCTCTTTAAGTGCGATGAATGTGGAAAATCATTTACGGCTGCACATAATTTGAAGCAACATAAAGCTTCACATTCGATTTTATATAAATGCAATGAATGTGATAAATCATTTGGTACTTTAAAAAGCTTAAGTGAGCATGTAGCCTGGCATAAAAATCCCAACCTCTATAAGTGTGATGAATGCGGGAAAGCTTTCCAGAGAAAAGAAAGTTTGAAGGAACATAAAGTCTCACATTCCAATTTAAATAAATGCAGTGAATGCGGTAAATCATTTGGTACATTACGGGGCCTTAAATTTCATAAAGCTTCGCATTATTATCCCGAAATCTGTAAATGTAATAAATGTGGAAAACCCTTTAGGATTGTGACCTCTTTGAAGGATCGTGAAGTTTTCAGTTCGAATTTAAATAAATGTAACGAATGCGACAAATCATTTGATACATTACAAAGCATGAAAGTCCAAGCAGCGTTGCCCAATAATTCTGACCTCTACAAATGCGATGAATGTGGCAAATCCTTTTTGAAAGCGCAGAATTTGAAGCAACATCAATTTACACATTCTAAATTGAATAAATGTAATGAATGCGGTAAATCATTTGGTACAATACAAAACTTAAAAGATCATGTTGCTTTGCACAAAAATCCCGACCTCTACAAATGTGATAAATGTGAAAAAACCTTTACCAAAGCGCATACCTTGAATCAACATATATTTTCACATTCTGAATTTAATAAATGTGATGAATGTGGTAAATCATTTGGTACCTTAAAAAGCTTAGAACTCCATGTAGCTTTGCATAAGAATCCCGACCTTTACAAATGCGATATATGTGAGAGATCCTTCACGAAAGCGCATAGTTTGAATCAACATAAATTTTCACACTCTGAATTTAATAAATGTGTTGAATGTGGTAAATCGTTTGGTACATTAAAAAGTCTGAAATATCACGTAGCCTTGCATAAAAAACCCGATCTTTTGAAGTACGATGAACGTGAGAAAGTCTTTCCGCGACTTATCTTAAATGCCCATGCAGTTGATTCATGA
Protein Sequence: MKDMLLFPKRLADEFQSNICEYNLKEEETIDRKLIKCESDQNESGFEVLIIHSDEKDDKTETLVDVKFDDIDGCDNKTSLENETCSKYDQEDNLKEKTSEKTIEKLTKAMTVSDTQDNTRYQYGEVYKTGQHISSERERVRHECEILFSKSADLQSTGGNNSGLKIYEYENCDADNTRYQYGEVYKTGQHISSEWERVRHECEILFSKSADLQSTGGNNSGLKIYEYENCDALALDRSPLKLHLATINSTLSEKYSNKFLHLNFNSNECGEYDKSFLTLQNLKQQAAFDQSLNLYKCHECGKAFKRKRNLKEHIVSHSDLCKCRECGKSFGTLQGLKEHVALHVNPDLFKCDECGKSFTAAHNLKQHKASHSILYKCNECDKSFGTLKSLSEHVAWHKNPNLYKCDECGKAFQRKESLKEHKVSHSNLNKCSECGKSFGTLRGLKFHKASHYYPEICKCNKCGKPFRIVTSLKDREVFSSNLNKCNECDKSFDTLQSMKVQAALPNNSDLYKCDECGKSFLKAQNLKQHQFTHSKLNKCNECGKSFGTIQNLKDHVALHKNPDLYKCDKCEKTFTKAHTLNQHIFSHSEFNKCDECGKSFGTLKSLELHVALHKNPDLYKCDICERSFTKAHSLNQHKFSHSEFNKCVECGKSFGTLKSLKYHVALHKKPDLLKYDEREKVFPRLILNAHAVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -