Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:381333839-381336001[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00072 0.3 14.7 0.7 2 23 122 143 121 143 0.95

2 15 0.00042 0.18 15.4 2.4 2 23 150 171 149 171 0.97

3 15 0.026 11 9.8 7.3 2 23 178 199 177 199 0.96

4 15 1.2e-07 5.2e-05 26.6 2.4 1 23 205 227 205 227 0.98

5 15 0.00038 0.16 15.6 1.4 1 23 233 256 233 256 0.94

6 15 2.1e-05 0.0089 19.5 0.3 2 23 263 284 262 284 0.97

7 15 4.3e-06 0.0018 21.7 2.3 1 23 290 312 290 312 0.99

8 15 0.00064 0.27 14.9 0.8 2 23 319 340 318 340 0.95

9 15 0.0017 0.71 13.5 1.5 1 23 346 368 346 368 0.97

10 15 4.4e-08 1.9e-05 28.0 0.7 1 23 374 396 374 396 0.97

11 15 9.9e-05 0.042 17.4 0.5 2 23 403 424 402 424 0.94

12 15 3.5e-06 0.0015 22.0 0.6 2 23 431 452 430 452 0.96

13 15 8.7e-06 0.0037 20.7 6.0 1 23 458 480 458 480 0.98

14 15 0.00035 0.15 15.7 0.6 1 23 486 508 486 508 0.97

15 15 0.00016 0.067 16.8 2.2 1 23 514 536 514 536 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00072	0.3	14.7	0.7	2	23	122	143	121	143	0.95
2	15	0.00042	0.18	15.4	2.4	2	23	150	171	149	171	0.97
3	15	0.026	11	9.8	7.3	2	23	178	199	177	199	0.96
4	15	1.2e-07	5.2e-05	26.6	2.4	1	23	205	227	205	227	0.98
5	15	0.00038	0.16	15.6	1.4	1	23	233	256	233	256	0.94
6	15	2.1e-05	0.0089	19.5	0.3	2	23	263	284	262	284	0.97
7	15	4.3e-06	0.0018	21.7	2.3	1	23	290	312	290	312	0.99
8	15	0.00064	0.27	14.9	0.8	2	23	319	340	318	340	0.95
9	15	0.0017	0.71	13.5	1.5	1	23	346	368	346	368	0.97
10	15	4.4e-08	1.9e-05	28.0	0.7	1	23	374	396	374	396	0.97
11	15	9.9e-05	0.042	17.4	0.5	2	23	403	424	402	424	0.94
12	15	3.5e-06	0.0015	22.0	0.6	2	23	431	452	430	452	0.96
13	15	8.7e-06	0.0037	20.7	6.0	1	23	458	480	458	480	0.98
14	15	0.00035	0.15	15.7	0.6	1	23	486	508	486	508	0.97
15	15	0.00016	0.067	16.8	2.2	1	23	514	536	514	536	0.97

Sequence Information

Coding Sequence: ATGATATTCCAGCAGGAAAATGCAGCTTTACTTGATATGATTAGATCAATGATGCCGTTGCGGatGGAAGCCGACGATTCTCTTCCAAAAGCTATATGCATAGAGTGTGTCCAAAAGTTATGCATTGCATATGATTTTAAAGCTCAGTATATGAATACctgctttaaatttaaaaataaatcaagcaCTGCAACGAATAAGTCTTTAAATGAATTACCTAAACCAAATGAAACTGTAGCAGCCAACAATGTTGCAAAGAATTCAGGACTTGTTAAAACTATACCGAACCGAAAGCTGCCAGGGAGTGCTGGACCATTGCTTGCAGTATCCCGTCCTGAAGGGGAAGCGGGTGATCAAGAAATACGGTGCGACATGTGCAACTTAACGTTTACAAGTATGCGGGGATTAAAGCGACACGAACTGTATCACGATAAAGACGGAGTAATGAAATGCCATCTTTGTGAAATGTATTTTAAGAAAAGAGAAGACTTGGAGAAACACATTCAGTTGCACTCAAGCCCGGAAACGTTGAAATGTGAACATTGTCCGAAAATATTCCTAATGAAACATCACTTTAAAAGACATATGTCGCTACACGCGAATCCTGAACTATTTAAATGCGATCAGTGCGGAAGATGCTTCGCGAGGAGAGAAAATTTGAAGGCACATATAAAACTACATATGCGACAGAAAGTCTTCACTTGTGAACTATGTGGAGAATGTTTTGCCATGAATTATGCATTGACTGAGCACCATGAATTGCTTCATTCCATTTCTTCGGCAATTAAATGCGAGGAGTGCGGAAAAACGTTCTCCGGGAGAAGATTATTAGTAGAACATAAAAGGTGGCACCAAGATCCAACCGTATATAAATGCGAAGATTGCGGTCGATTTTTCTCAGCACGGAAATATTTAAACAAACATAGAAAAATACACGATAGTTCAGGCTCTTGTCAGTGTACAGAATGTGGTGAAATATTTAGAACaagtgaaattttgaagaaacATGAAATAGTACACACTAATCCCGATGCTTATAAGTGCACGCAATGTGGCGAAGATTTGAAAACAAGTAAACGATTAAAAGAGCACTTGATGTTCCACGCAAATCCAAGCGCTTTCACATGTGAAATATGCGATAAGGTGTTCAGACGCTCGTCCTATTTGAAGGAGCATATGATATTGCATGACAATCCTGAAGCACTCACATGCGAACCTTGTGGCAAGACGTTTTCTCGTAGAGAGTATTATCGAATACATCAAATGTGGCATGCTGATCCCACCATACTCAAATGTGATGATTGTGGGAAAGACTTCACGAATTTGTATTCGTTAAAACAGCACAAGATAATACATTCCGATCCTGATCGCTTCAAATGTGAAACGTGTGGCAAATCATTTTCTCGATTTGAACATCTACGACAACATCATTCGGTGCACCAAAGTCCCGGCCTCTATAAATGCGACCATTGTACCGCTTCTTTTGCAAGCTCAGAAATGTTAGCAATGCATTCTTTAATGCATGAAAATCAAGAGGAATTCAAATGCCACCAATGTTCAGAATCGTTCACGAATGTTGCTGATCTTAACACACACTTCATTAGCCATTTAAACTGGGTGCAAACCGATTAA
Protein Sequence: MIFQQENAALLDMIRSMMPLRMEADDSLPKAICIECVQKLCIAYDFKAQYMNTCFKFKNKSSTATNKSLNELPKPNETVAANNVAKNSGLVKTIPNRKLPGSAGPLLAVSRPEGEAGDQEIRCDMCNLTFTSMRGLKRHELYHDKDGVMKCHLCEMYFKKREDLEKHIQLHSSPETLKCEHCPKIFLMKHHFKRHMSLHANPELFKCDQCGRCFARRENLKAHIKLHMRQKVFTCELCGECFAMNYALTEHHELLHSISSAIKCEECGKTFSGRRLLVEHKRWHQDPTVYKCEDCGRFFSARKYLNKHRKIHDSSGSCQCTECGEIFRTSEILKKHEIVHTNPDAYKCTQCGEDLKTSKRLKEHLMFHANPSAFTCEICDKVFRRSSYLKEHMILHDNPEALTCEPCGKTFSRREYYRIHQMWHADPTILKCDDCGKDFTNLYSLKQHKIIHSDPDRFKCETCGKSFSRFEHLRQHHSVHQSPGLYKCDHCTASFASSEMLAMHSLMHENQEEFKCHQCSESFTNVADLNTHFISHLNWVQTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -