Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:369889471-369894521[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00041 0.17 15.5 2.4 1 23 281 303 281 303 0.94

2 15 3.6e-05 0.015 18.8 0.5 1 19 309 327 309 331 0.96

3 15 6.1e-05 0.026 18.1 1.3 1 23 337 359 337 359 0.96

4 15 0.0014 0.58 13.8 0.6 1 23 363 385 363 385 0.86

5 15 1.4e-05 0.0061 20.1 0.8 1 23 391 413 391 413 0.98

6 15 0.053 22 8.8 0.1 2 19 418 435 417 439 0.94

7 15 5.1e-06 0.0021 21.5 1.4 1 19 445 463 445 467 0.94

8 15 0.0024 1 13.1 5.4 1 23 471 493 471 493 0.93

9 15 1.8e-05 0.0075 19.8 0.7 1 23 499 521 499 521 0.96

10 15 2.9e-05 0.012 19.1 3.1 1 23 525 547 525 547 0.96

11 15 9.9e-06 0.0042 20.6 0.5 1 23 553 575 553 575 0.98

12 15 0.00017 0.07 16.7 0.2 2 23 580 601 579 601 0.94

13 15 3.3e-06 0.0014 22.1 0.6 1 23 607 629 607 629 0.94

14 15 9.7e-05 0.041 17.5 0.1 2 23 634 655 633 655 0.94

15 15 3.3e-05 0.014 18.9 0.5 1 18 661 678 661 678 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00041	0.17	15.5	2.4	1	23	281	303	281	303	0.94
2	15	3.6e-05	0.015	18.8	0.5	1	19	309	327	309	331	0.96
3	15	6.1e-05	0.026	18.1	1.3	1	23	337	359	337	359	0.96
4	15	0.0014	0.58	13.8	0.6	1	23	363	385	363	385	0.86
5	15	1.4e-05	0.0061	20.1	0.8	1	23	391	413	391	413	0.98
6	15	0.053	22	8.8	0.1	2	19	418	435	417	439	0.94
7	15	5.1e-06	0.0021	21.5	1.4	1	19	445	463	445	467	0.94
8	15	0.0024	1	13.1	5.4	1	23	471	493	471	493	0.93
9	15	1.8e-05	0.0075	19.8	0.7	1	23	499	521	499	521	0.96
10	15	2.9e-05	0.012	19.1	3.1	1	23	525	547	525	547	0.96
11	15	9.9e-06	0.0042	20.6	0.5	1	23	553	575	553	575	0.98
12	15	0.00017	0.07	16.7	0.2	2	23	580	601	579	601	0.94
13	15	3.3e-06	0.0014	22.1	0.6	1	23	607	629	607	629	0.94
14	15	9.7e-05	0.041	17.5	0.1	2	23	634	655	633	655	0.94
15	15	3.3e-05	0.014	18.9	0.5	1	18	661	678	661	678	0.96

Sequence Information

Coding Sequence: ATGAGCATTAGTTTCTTTGAGCATTCCTTTATAAAACGGAGTCAAGCAGACTGCTATCAAAAGGATAGATATGCAGTATCGCCTCCTAGATTTGACCCAGCCATGGCATTGATGCAGGTGGACTTTTCAAAGAATTTCACTTGCATTGCTCAAGATAAAGTTCAGAGCTTTGATGGACCAGGCTCACAACTTGAAAACAAATATATAGCAAATGGCATTCACATTTTGAAAGAAAGGAATAGTTTGCATttagtttggaaatattttgcaACATTCCACGGAAAAGGGCCTGTTGATCGTATAGGTGGTGCTTTAAAAAGTGATGTGCGAAGTAAACTTCTGAAGAGGAAAGTGGTCATCTTCAATGCTGAACAATTTGTCAATGCGGCCAAAGATTCTGCTATAAAAGTGATTAACGTTTCACCAAATAAAATTAATGAAACCGCAAAAGAAATGAGTCTGGATTCAGTATTTTCTAAAGCACCTACAGTTGTTGGAATCTTCAAAAGTCATTTAATTTATTGGCAAAATGATACGCTGCAAATGGCTCAAACATCAGAAGAACTAAACATGGTTATCTCAGAAATACGTTCTTATTATGAAGAAGTATATGGATCTGATAGTgacaattttaaaagtgaagatAATATATCTTTATCTGTGTTAAAAGAAAGGTCAATTTCAAGCCAGGTCCTAACAACTGAGCAAAGTGGCTACAATCATATTACACTCAAATCAACTGATTTGCAGAGCATTCGCGAACACTCCGACGATTCTCTTTCCTTGGAATCACGAGCAGTTAGCAAAATTCATTCCGAAAATGCCTTGAAGCCTTGTTTCCATAAATGCCATGATTGCGGCAAATTATTCGGTTCGTTGAAAAACTTAAGATTGCATGAAGCATTACATAAGAATCCCGACCTCTATAAATGCAACGAATGTGGTAAATCATTTGCTagattacaaaaattaaaaatgcaTGACGCTTGGCATAAGAATCCTGATATATATAAATGTGATGAATGTGGAAAAACTTTAACGTCAGCCCATGGTTTGAAGCAACATAAAGATTTACATTCCAATTTATTTAAATGCAATTTATGCGGAAAATCGTTTAGTACAATACATATCATGCAAGCCCATGAAGCCATCCATAAAAATCCAAACATTTATAAATGCGATGAATGTGGTAAAACCTTCACGGCGGAACTCAGCTTGAAGCGACATAAAATTTCCCATTCGAATTTGCTTAAGTGCAATGCTTGCGGACAATCATTTGGAACACTAGAAGGCTTAAAAGACCATGATGCTTGGCATAAGAATCCTGATATCTATAAATGCGATAAATGTGGCAAATCCTTCAAAACTGCACAAAATTTGAAATTACATGACGTTACACATTCTGTTTCATGTAAATGTAAGGAATGCGGCAAGTTATTTTGTACGTTAAGAAACTTAAAATTGCATGAATCTTGGCACAAGAATCCTGATATGTATAAATGCGATGAATGTGGGAAGACCTTCACATCTGCAATGGGTTTCAAAGAACATAAAGTTTCACATTCCAACTTATATAAATGTAATGAATGTGGTAAATCATTTCATAAGCTAGAAAGTTTGAAAGCCCACCATGCTTGGCATAAGAATCCCGCCATATACAAATGTAATACATGTGGAAAAACGTTTGCAATAGCACAAAATTTGAAGCTTCATCAAGTCTCACATACTGATTTCAATAAATGCAACGAATGCGGTAAGTCATTTGGTACATTACGAAGCTTAGCAGTTCATGAAGCTTTGCATAAAAATCCCGACCTTTATAAATGCAATGACTGTGGGAAAACCTTCATGTCAGCCCGTAATTTGGAGCAACATAGTGTGTCCCATTCAGATTTGAGTAAATGTAATGAATGTGGTAAATCGTTTGCTACGTTAAATGGCTTAAATTTACACGCAGCCTTGCATATAAATCCCAACCactttaaatgtgatgaatgtggAAAATCTTTCACGTCAGCTGGAAATTTGAAAAAACAAAGTTTTACATTCTGA
Protein Sequence: MSISFFEHSFIKRSQADCYQKDRYAVSPPRFDPAMALMQVDFSKNFTCIAQDKVQSFDGPGSQLENKYIANGIHILKERNSLHLVWKYFATFHGKGPVDRIGGALKSDVRSKLLKRKVVIFNAEQFVNAAKDSAIKVINVSPNKINETAKEMSLDSVFSKAPTVVGIFKSHLIYWQNDTLQMAQTSEELNMVISEIRSYYEEVYGSDSDNFKSEDNISLSVLKERSISSQVLTTEQSGYNHITLKSTDLQSIREHSDDSLSLESRAVSKIHSENALKPCFHKCHDCGKLFGSLKNLRLHEALHKNPDLYKCNECGKSFARLQKLKMHDAWHKNPDIYKCDECGKTLTSAHGLKQHKDLHSNLFKCNLCGKSFSTIHIMQAHEAIHKNPNIYKCDECGKTFTAELSLKRHKISHSNLLKCNACGQSFGTLEGLKDHDAWHKNPDIYKCDKCGKSFKTAQNLKLHDVTHSVSCKCKECGKLFCTLRNLKLHESWHKNPDMYKCDECGKTFTSAMGFKEHKVSHSNLYKCNECGKSFHKLESLKAHHAWHKNPAIYKCNTCGKTFAIAQNLKLHQVSHTDFNKCNECGKSFGTLRSLAVHEALHKNPDLYKCNDCGKTFMSARNLEQHSVSHSDLSKCNECGKSFATLNGLNLHAALHINPNHFKCDECGKSFTSAGNLKKQSFTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -