Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017742.1:24278595-24282351[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0046 1.9 12.2 1.8 1 23 249 271 249 271 0.98

2 13 1.8e-05 0.0076 19.7 2.1 3 23 280 300 279 300 0.97

3 13 0.00052 0.22 15.1 0.4 1 23 312 334 312 334 0.97

4 13 1.3e-05 0.0056 20.2 2.3 1 23 340 362 340 362 0.99

5 13 4.1e-05 0.017 18.6 0.1 2 23 369 390 368 390 0.97

6 13 2.6e-05 0.011 19.3 2.6 1 23 399 421 399 421 0.98

7 13 1.3e-06 0.00055 23.3 0.6 3 23 429 449 427 449 0.97

8 13 2.6e-07 0.00011 25.6 4.4 1 23 455 477 455 477 0.97

9 13 4.6e-08 1.9e-05 27.9 0.5 1 23 483 505 483 505 0.98

10 13 1.1e-06 0.00046 23.6 0.9 1 23 511 533 511 533 0.99

11 13 5.1e-05 0.021 18.3 6.1 1 23 539 560 539 560 0.98

12 13 4.2e-07 0.00018 24.9 2.2 1 23 566 588 566 588 0.99

13 13 8.7e-05 0.037 17.6 4.0 1 23 594 616 594 616 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0046	1.9	12.2	1.8	1	23	249	271	249	271	0.98
2	13	1.8e-05	0.0076	19.7	2.1	3	23	280	300	279	300	0.97
3	13	0.00052	0.22	15.1	0.4	1	23	312	334	312	334	0.97
4	13	1.3e-05	0.0056	20.2	2.3	1	23	340	362	340	362	0.99
5	13	4.1e-05	0.017	18.6	0.1	2	23	369	390	368	390	0.97
6	13	2.6e-05	0.011	19.3	2.6	1	23	399	421	399	421	0.98
7	13	1.3e-06	0.00055	23.3	0.6	3	23	429	449	427	449	0.97
8	13	2.6e-07	0.00011	25.6	4.4	1	23	455	477	455	477	0.97
9	13	4.6e-08	1.9e-05	27.9	0.5	1	23	483	505	483	505	0.98
10	13	1.1e-06	0.00046	23.6	0.9	1	23	511	533	511	533	0.99
11	13	5.1e-05	0.021	18.3	6.1	1	23	539	560	539	560	0.98
12	13	4.2e-07	0.00018	24.9	2.2	1	23	566	588	566	588	0.99
13	13	8.7e-05	0.037	17.6	4.0	1	23	594	616	594	616	0.98

Sequence Information

Coding Sequence: ATGAGTGTAGTGGAATTACCGAATATTTCTTTGAACTTGCAAAGCAGTCGCGCTGAAAATGATCTGTTTGCAATATCCGGGCAAGAAATAACTTTAAGTGAAACGTCAGAGCTCGATCCTAGTTCCGAAGCAAAAGTGTTACTTTGCAGTGGCTTTGATACGGATGCGGTAGTAACCGATGGTTCAGATTTAAAAAGCAAATTTGCTGTAATATGTCGATTTTGTTTGAGTGAAAATGAATATATGCTAGGAGTGCAAGATGTCGATGCATTGGTCTTGGAGATGATTGCTTCACTGACCAAAATAAAAATTGATTTTGACGATTCCCTCCCAAAACTGATATGTACTGACTGTTTCGAAACGATAGCAAATTTTTATGCTTTCAAACAACGAATTTTAGAAGCTGATAAAACCTTACGGAGCTGTTTAGTCTTGGAAGAAGGAGTAGATCAAGATGATAGTAAAGAAAACCATCAATCTATTTGTGAAAGAACTGAAGAAGAAATCAAGGATAATCATTCAGAAAGTTGGGAAAATATTGGAATGTTTGATGAATTTATTGAAGAAGACTACGATCCTAACTATACAATGGTTTATGAAACCGACCCAGTCGTATATTCAGATTGTGAAACAGATGATGAAACTTCTCTTACTGGTAAAAACCCTCAGTTGCCAGATATTCAAACTGTCTCACTATCATCCAATGATCAGGAATCCAAACCACTCGAAAATCGAGAAGAATCACACAAATGTAAACTATGTAACTTGGATTTCAATGATGAGATTCTATTATCTGAACACACAAAAACCCATGAGAGCAAAGAACGGAAAAACATCTGTCCAATATGTAGAAAATCGTTTTCGCGCTCATCAAATTTGCAGTGCCATATGGCCTCACATCGGAGTGAAGACAAAGGAAAATTACAAAACGGATTTAAATGTCCAAAATGTGATTCGAGCTTCACAGTTGAAAAAGATCTTTTCATTCATGAATCGATTCATGCTGATAATGATAAGTTTCAGTGTCGAGAATGTTTTAAAGAATTTCCAAACCTTTCCAAATTAAAACGCCATGTCAAAACTCACTATGAAGACAAACCGATTAAATGCGAAGAATGCGGTCGCGGGTTTCCCGAAATGGCTTCGTTGACACGCCACTACCGTATCCACACCAAAGAGCCGCGTGACCGGAAGCATGTATGTAAAGAATGCGGGAAGGCATACTTTGACTCCCACTCACTTTCAATTCACGTTCGCACTCATACCGGTGAAAAGCCCTGGGCCTGCTCACAATGTGACAAACGCTTCATTGATTCTCGACTTTTAAATTCACATATGCGAACACATATGAGTATCAGAACACACGCCTGCAATATTTGTGACAAAAGTTTTACCCATCGAAGCACGCTTGTGAGTCACATGCGTACTCATACCGGCGAAAAACCGTTTGTGTGTAATATTTGTAATAAATCCTTCATTCAGTCGTCGAATCTGATGTTGCACCTGCGTGTTCACTCAGGCGAAAAACCCTATAAATGTTCAAAATGTCCAAAGGCGTTTGGGAGCTCTTCAACCCTTTCGCTGCACCTTCGTACTCACACGGGAGAAAAACCGTACAGTTGTAAACATTGTGGGAAAAAATTTGCTCGCCACAATCTTACAATTCACATGCGAACGCATACTGGTGAGAAACCATACGAGTGCACGGAATGCTCGCGGAAATTCACCACTTCTAGTCAGCTTGCTCAACATAGAAGAACTCATACTGGAGACAAGCCTTTCTCCTGCGAGATTTGTGATAAAAAATGGACTACGCATTTTAACTTGAAAAAACATATGCAAACACACTTGTCTAATACTAAACCGGAAGTACTATTGAAGGAAGAAAGCGATGAAGATCGTATTGAAACTGCGATTCAGGAAAAGAATGATCCTTACGACCACCAAAAGCACCGAATACGCATTGAGGAAATTCAAAGTGATGCAGAGTTCAACGAGAATGCAATTCTGGTGAATGATTTACTTGCGTCCGTGGTGAATGTCAATCCTGATGTACTACAAAGTGGGAATGTAGAGATCCCTGAGTTATCCTCTTATGATTCAAATCCAGATTTAGGTGAATTTAGAAACGTGATAAATTCAAGTCGATTCCAAAGCTCAAAAACCAATGAACCGGCCGGGGAACGAGTTTTCGTCACTGAGGCATGA
Protein Sequence: MSVVELPNISLNLQSSRAENDLFAISGQEITLSETSELDPSSEAKVLLCSGFDTDAVVTDGSDLKSKFAVICRFCLSENEYMLGVQDVDALVLEMIASLTKIKIDFDDSLPKLICTDCFETIANFYAFKQRILEADKTLRSCLVLEEGVDQDDSKENHQSICERTEEEIKDNHSESWENIGMFDEFIEEDYDPNYTMVYETDPVVYSDCETDDETSLTGKNPQLPDIQTVSLSSNDQESKPLENREESHKCKLCNLDFNDEILLSEHTKTHESKERKNICPICRKSFSRSSNLQCHMASHRSEDKGKLQNGFKCPKCDSSFTVEKDLFIHESIHADNDKFQCRECFKEFPNLSKLKRHVKTHYEDKPIKCEECGRGFPEMASLTRHYRIHTKEPRDRKHVCKECGKAYFDSHSLSIHVRTHTGEKPWACSQCDKRFIDSRLLNSHMRTHMSIRTHACNICDKSFTHRSTLVSHMRTHTGEKPFVCNICNKSFIQSSNLMLHLRVHSGEKPYKCSKCPKAFGSSSTLSLHLRTHTGEKPYSCKHCGKKFARHNLTIHMRTHTGEKPYECTECSRKFTTSSQLAQHRRTHTGDKPFSCEICDKKWTTHFNLKKHMQTHLSNTKPEVLLKEESDEDRIETAIQEKNDPYDHQKHRIRIEEIQSDAEFNENAILVNDLLASVVNVNPDVLQSGNVEIPELSSYDSNPDLGEFRNVINSSRFQSSKTNEPAGERVFVTEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -