Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017740.1:73765387-73783743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.2 85 7.0 0.5 2 17 159 174 159 175 0.89

2 15 6.1e-07 0.00026 24.4 1.1 1 23 264 286 264 286 0.98

3 15 1.9e-05 0.0079 19.7 1.2 1 23 292 314 292 314 0.96

4 15 4.7e-05 0.02 18.4 0.9 1 23 320 342 320 342 0.92

5 15 7.9e-06 0.0033 20.9 1.2 1 23 348 370 348 370 0.96

6 15 2.6e-06 0.0011 22.4 2.0 1 23 376 398 376 398 0.98

7 15 4.7e-06 0.002 21.6 2.5 1 23 404 426 404 426 0.97

8 15 2.9e-07 0.00012 25.4 0.4 1 23 432 454 432 454 0.98

9 15 0.00062 0.26 14.9 4.8 1 23 460 482 460 482 0.95

10 15 2.9e-06 0.0012 22.2 3.5 1 23 488 510 488 510 0.98

11 15 4.8 2e+03 2.7 1.1 6 23 521 538 520 538 0.97

12 15 1.2e-05 0.005 20.3 3.4 2 23 545 566 544 566 0.95

13 15 5.6e-05 0.024 18.2 3.3 1 23 572 594 572 594 0.96

14 15 6.4e-05 0.027 18.0 3.3 1 23 600 622 600 622 0.94

15 15 2.4e-07 0.0001 25.7 0.7 1 23 628 650 628 650 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.2	85	7.0	0.5	2	17	159	174	159	175	0.89
2	15	6.1e-07	0.00026	24.4	1.1	1	23	264	286	264	286	0.98
3	15	1.9e-05	0.0079	19.7	1.2	1	23	292	314	292	314	0.96
4	15	4.7e-05	0.02	18.4	0.9	1	23	320	342	320	342	0.92
5	15	7.9e-06	0.0033	20.9	1.2	1	23	348	370	348	370	0.96
6	15	2.6e-06	0.0011	22.4	2.0	1	23	376	398	376	398	0.98
7	15	4.7e-06	0.002	21.6	2.5	1	23	404	426	404	426	0.97
8	15	2.9e-07	0.00012	25.4	0.4	1	23	432	454	432	454	0.98
9	15	0.00062	0.26	14.9	4.8	1	23	460	482	460	482	0.95
10	15	2.9e-06	0.0012	22.2	3.5	1	23	488	510	488	510	0.98
11	15	4.8	2e+03	2.7	1.1	6	23	521	538	520	538	0.97
12	15	1.2e-05	0.005	20.3	3.4	2	23	545	566	544	566	0.95
13	15	5.6e-05	0.024	18.2	3.3	1	23	572	594	572	594	0.96
14	15	6.4e-05	0.027	18.0	3.3	1	23	600	622	600	622	0.94
15	15	2.4e-07	0.0001	25.7	0.7	1	23	628	650	628	650	0.98

Sequence Information

Coding Sequence: ATGACGTACGATAAATTCAAAATTATGAGTCTAAGAAATccacaacaaaatattaaagagATGTTGTCTTGCAATGAATCTGTTAATCCTATAGAAGTCGCAGGAAGTTTCACAAAAACTAAAATACGAAAAAAACGTCAAGTTAATATAAAATCTAATTGCAAAATAGTGGAAGCTTCAACTAGTATTTCGCAGTTAAAAAATAGTACATCCACTGAATCCGTGTGTAGCCAAGATAGCAAATCTACAATTACTGGTCTGAATGAGGTTAATCCAAGCATGCATGTTATAGGATATGAAGATGGAAACATTAAGAAACATATAGAGAATCGATCCGATATGGTTCTCAAAGAAGAAACGAATAATTTTAATGACGGGAACGGACAGGTGAATTCTACGCAGAAAGTTAAAAGTGACGAAAGGGTAGAAGATTCACCGTCAAAATCGGCGTCCATTAACGAAGAAAAGCTCCCAACATGTAAAAAATGTGGCATGGAATTCAATCAGAGAACTGATTATAGATATCAGGGTCAAAATTCAACGTCACAAGAAAACATATGCGAAGAATGTGGGAAAATATCTAAAATTGGAGATCTCGAGAGCAATGTAGGAATGCATTCTAGTGCAGAATCATTAGttcaaattcaatataataaTTCATCAAACGAACAGTTGTTTGACGTGAATTCAAGTTCAATGCCACCGAACGATAGAAGTGGAAAAAGTCAGTTGCAATGTGTATCTAAAATACACAACTCTTTAGGTTGCGAGGAAGCTTCTCAAAACGTTTATAAATGTGACGAGTGTGGTAAATCATTCAGTAAGCTCCGTAATTTAACAAGCCATAAAATTATACATTCAAACAGAAAATTACACGAGTGTAAAGAATGTGGAAAAACGTACATAGACTCTCGCTCTTTGAAGGTACACGAGCAATTACATTTGAATCCTGACATGTACAAATGCAATGACTGTGGGAAATCATTTGCTACGCGAGAAGGATGGGAGGATCATAAGTTTTTTCACTTAAATCCCGATTTTTATAAATGTGATGAGTGTGGAGAATCATTTAGTCGAGCGTACAAATACAAAAATCATAAAGCTTTACACTCAAATCCAAACCTCTATCAGTGTGATAAATGTGGGAAATCATTTGGAACTACATATTCTCTGAATAGGCACAAACAGTTGCATTTGAATTCCAACATCTACAAATGTGATGAATGTGGGAAAACGTTTAAACAGGAGGAATACTATAAGAAACACAAGTTGCTGCATATAAATCCTGATTTATTTAAATGCGCTGAGTGTGGGAAAACATTTAATAGTCAGGCATTATTGCGGCAGCATATGATTTTACACTCGAATCCTGATCTTTATACATGCGATGATTGTGGCAAATCTTATAGTCATTTGCAAAAATACAGGAATCATAGAACCTTTCATACGAATCCAAATCTTCATCAGTGCAAAGAATGTGGAAAGTCTTTTCAAGATTCGCAGTATTTACTGAAACACCAACGATTGCATTTGAATCCCAATTTATACAAATACGAAGCATGTGGAAAATCATCTATAGGACGACGACTTTTTGAGCATCATAAATCGAGGCACTCGAATTCTATTTTAAATAAGTGCGATGAATGTGGACAGTCATTTTCTAGACGATATGATTTGAAGAAACATAAACATTGGCACATGAACCCCGAGCTATATAAATGCGATGAATGTGGCAAAACTTTTCGTCACTTGCGCTATTATGAGAATCATAAGGCTTTACATTTGAATCCGAGCCTTCATGCATGTGACGAATGTGACAAGTCATTCATGGATTCACATTCCTTAAAAAGACATAAAATATTGCATTTGAACCCTGACTTATATCGGTGCGAAATATGCGGAAAATCTTTAACCACATCAAAGAACTTGAAGAATCATATAGCTAGGCATTCCAAAAGTTGA
Protein Sequence: MTYDKFKIMSLRNPQQNIKEMLSCNESVNPIEVAGSFTKTKIRKKRQVNIKSNCKIVEASTSISQLKNSTSTESVCSQDSKSTITGLNEVNPSMHVIGYEDGNIKKHIENRSDMVLKEETNNFNDGNGQVNSTQKVKSDERVEDSPSKSASINEEKLPTCKKCGMEFNQRTDYRYQGQNSTSQENICEECGKISKIGDLESNVGMHSSAESLVQIQYNNSSNEQLFDVNSSSMPPNDRSGKSQLQCVSKIHNSLGCEEASQNVYKCDECGKSFSKLRNLTSHKIIHSNRKLHECKECGKTYIDSRSLKVHEQLHLNPDMYKCNDCGKSFATREGWEDHKFFHLNPDFYKCDECGESFSRAYKYKNHKALHSNPNLYQCDKCGKSFGTTYSLNRHKQLHLNSNIYKCDECGKTFKQEEYYKKHKLLHINPDLFKCAECGKTFNSQALLRQHMILHSNPDLYTCDDCGKSYSHLQKYRNHRTFHTNPNLHQCKECGKSFQDSQYLLKHQRLHLNPNLYKYEACGKSSIGRRLFEHHKSRHSNSILNKCDECGQSFSRRYDLKKHKHWHMNPELYKCDECGKTFRHLRYYENHKALHLNPSLHACDECDKSFMDSHSLKRHKILHLNPDLYRCEICGKSLTTSKNLKNHIARHSKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -