Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:369287349-369315298[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.5 2.7e+03 2.3 0.6 1 8 121 128 121 129 0.93

2 15 1.8e-05 0.0074 19.8 1.2 1 23 193 215 193 215 0.97

3 15 0.00036 0.15 15.7 1.6 1 23 221 243 221 243 0.98

4 15 8.1e-06 0.0034 20.8 0.1 1 23 249 271 249 271 0.97

5 15 7.5e-06 0.0032 20.9 5.0 1 23 277 299 277 299 0.98

6 15 1.5e-05 0.0064 20.0 0.9 1 23 305 327 305 327 0.98

7 15 3.4e-06 0.0014 22.0 0.2 2 23 334 355 333 355 0.96

8 15 4.4e-06 0.0018 21.7 1.5 1 23 361 383 361 383 0.97

9 15 2.7e-06 0.0011 22.4 1.0 1 23 389 411 389 411 0.96

10 15 4.7e-06 0.002 21.6 0.5 1 23 417 439 417 439 0.97

11 15 0.00019 0.08 16.5 2.0 2 23 446 467 445 467 0.94

12 15 6.5e-07 0.00027 24.3 4.2 1 23 473 495 473 495 0.99

13 15 6.3e-05 0.026 18.0 1.0 1 23 504 526 504 526 0.97

14 15 5.4e-05 0.023 18.2 1.9 2 23 533 554 532 554 0.95

15 15 1.9e-05 0.0081 19.7 5.5 1 23 560 582 560 582 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.5	2.7e+03	2.3	0.6	1	8	121	128	121	129	0.93
2	15	1.8e-05	0.0074	19.8	1.2	1	23	193	215	193	215	0.97
3	15	0.00036	0.15	15.7	1.6	1	23	221	243	221	243	0.98
4	15	8.1e-06	0.0034	20.8	0.1	1	23	249	271	249	271	0.97
5	15	7.5e-06	0.0032	20.9	5.0	1	23	277	299	277	299	0.98
6	15	1.5e-05	0.0064	20.0	0.9	1	23	305	327	305	327	0.98
7	15	3.4e-06	0.0014	22.0	0.2	2	23	334	355	333	355	0.96
8	15	4.4e-06	0.0018	21.7	1.5	1	23	361	383	361	383	0.97
9	15	2.7e-06	0.0011	22.4	1.0	1	23	389	411	389	411	0.96
10	15	4.7e-06	0.002	21.6	0.5	1	23	417	439	417	439	0.97
11	15	0.00019	0.08	16.5	2.0	2	23	446	467	445	467	0.94
12	15	6.5e-07	0.00027	24.3	4.2	1	23	473	495	473	495	0.99
13	15	6.3e-05	0.026	18.0	1.0	1	23	504	526	504	526	0.97
14	15	5.4e-05	0.023	18.2	1.9	2	23	533	554	532	554	0.95
15	15	1.9e-05	0.0081	19.7	5.5	1	23	560	582	560	582	0.99

Sequence Information

Coding Sequence: ATGTGTTACAGAAACGTTTGCCGTATTTGTGAATCAGATGAAGAATTGGAAATGATTTTCAAAGATGAGAACGCTGAAATTCTTCAGATGCTTCGAAGATTTACATCAACTTCAGTAAGACACAGATGCACAGGTGAACAAGCGAATGACAGTCACGGTTGGAATCTACCAGGTTGGTGTATGGATGGAGCTTCAGAACCAAGTCGTAGCAATATCAGTGCGCTTTCGAAGGAGAAACTGGATTCATTGTATGATCAAAAcgcaaaggacaaaaatctacaGAATCTTGTCAACATTGAAGAATCCAGGGAAGATTACTTAGAAGTGAATGTAGTTTCCGAATCGGAAGCTGATAAGCTGTTCAAATGTGCCGGGTGTGGCAAACAATGGACTGGTAAAAATCGCTCGATAAAATGGTATACAAAGGCACAGGAGAACATACCTGTATGTGATGAATGCGATAAGATTTCAGCTAAATCGAAAAAGCCTACAAGTAATGAAGATATTCATTTGAACTCCGAACAAAGTCAAGCTCAGTTCTGTACACGGGAAAAATATGAGAAGCCGTTTGGCAAATACAAATGCGAGGAATGTGGCAAATTTTTCAACAACCGGCCCACGTACAAAACTCATTTAGCCTTGCATTTGAATCCCAATCGATATAAGTGTGACATATGCAGCAAAGTTTATAGGGTAGCGCATCGCTTGAAAATTCATAAGGCGACACATTTGAATCCTGATATGTACAAATGCGAGATATGTGGAAAGTCATTTGCTGACCCTCAGCGTATGAAGACGCATATAGCGTTGCATTCGAATCCTGACCTTTACAAATGCAACGAGTGTGGCAAATGTTTTAGTCAACTGCATACTTATAGGAATCATTTAGCCATTCACTTCAATCCTGATTTATACAAGTGCGACACATGCGGACAAACATTTACTGCTGCTCAGACTTTGAAAGAACATATGACAAAACATGCTTATCCTGAGCTTCTCAAATGCGATGAATGCGGGAAGGCCTTTGCAAACGCACGCAATTTAAATTCTCATAAAGCTTCACATACAGGCCGCAATCTATATAAATGTCAAGAATGTGGCAAGTCTTTTAGTCGGTCACTCACCTACAAAAACCATTTAGCCTTACATTCAAATCCTGATTTACATAAATGTGAAATATGTGGTAAATCATTTACGGTAGCATATAGTTTAAGGTCTCATAGAGTAATACATTTGAACCCTGATTTGTATAAGTGCGAGATATGCGGCAAGTCATTCACTGAATCACGCCGATTGAAAGCTCATAAAGCCATACACTCGAATCCTGATCTCACTAAATGCAATGAATGTGGTAAGACGTTCAATAAAATCTGGCATTTGAGAGACCACAAAGCCTTACATTCAGATCCAAATATCTACACATGCAAAGAATGCGGAAGATCCTTTCCTAATTCATGTTCTATGAGAAGACATATGAAAACGCACAGGGGGCTTGAATGTGACAATCAATATAAATGTCAAGAATGCGGCAAGTCTTTTAGTCTGTCACTCACATACAAAAACCATTTAGCCTTACACTCGAATCCTGATCTCAATAAATGCAATGAATGTGGTAAGACGTTCAATAGAATCTGGCATTTGAAAGACCACAAAGCCTTACATTCAGATCCAAATATCTACACGTGCAAAAAATGCGGAAGATCCTTATCTAATTCATGTTCTATGAGAAGACATATGAAAACGCATAGGGAGCTAGACTGTGACAGTAATTTAACAGATACAGCCCAAAACATTGCCGTCCAAGAGCATCCTCCTCTTCCTACTGTCTCACTATCTACGAACTAG
Protein Sequence: MCYRNVCRICESDEELEMIFKDENAEILQMLRRFTSTSVRHRCTGEQANDSHGWNLPGWCMDGASEPSRSNISALSKEKLDSLYDQNAKDKNLQNLVNIEESREDYLEVNVVSESEADKLFKCAGCGKQWTGKNRSIKWYTKAQENIPVCDECDKISAKSKKPTSNEDIHLNSEQSQAQFCTREKYEKPFGKYKCEECGKFFNNRPTYKTHLALHLNPNRYKCDICSKVYRVAHRLKIHKATHLNPDMYKCEICGKSFADPQRMKTHIALHSNPDLYKCNECGKCFSQLHTYRNHLAIHFNPDLYKCDTCGQTFTAAQTLKEHMTKHAYPELLKCDECGKAFANARNLNSHKASHTGRNLYKCQECGKSFSRSLTYKNHLALHSNPDLHKCEICGKSFTVAYSLRSHRVIHLNPDLYKCEICGKSFTESRRLKAHKAIHSNPDLTKCNECGKTFNKIWHLRDHKALHSDPNIYTCKECGRSFPNSCSMRRHMKTHRGLECDNQYKCQECGKSFSLSLTYKNHLALHSNPDLNKCNECGKTFNRIWHLKDHKALHSDPNIYTCKKCGRSLSNSCSMRRHMKTHRELDCDSNLTDTAQNIAVQEHPPLPTVSLSTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -