Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:368286745-368288487[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.23 95 6.9 0.0 7 23 42 58 42 58 0.92

2 16 4.5e-05 0.019 18.5 1.9 1 23 92 114 92 114 0.97

3 16 0.0037 1.6 12.5 0.2 5 19 124 138 123 143 0.93

4 16 0.36 1.5e+02 6.2 0.2 7 23 158 174 152 174 0.89

5 16 2.8e-06 0.0012 22.3 2.7 1 23 180 202 180 202 0.99

6 16 3e-05 0.013 19.0 1.1 1 23 208 230 208 230 0.97

7 16 7.6e-07 0.00032 24.1 1.7 1 23 236 258 236 258 0.95

8 16 0.00072 0.3 14.7 0.7 5 23 290 308 288 308 0.94

9 16 0.00079 0.33 14.6 1.5 1 23 314 336 314 336 0.95

10 16 2e-05 0.0086 19.6 1.9 1 23 342 364 342 364 0.97

11 16 0.002 0.83 13.3 0.2 2 23 371 393 370 393 0.88

12 16 8.9e-08 3.7e-05 27.0 2.6 2 23 400 421 399 421 0.96

13 16 3.9e-06 0.0017 21.8 0.6 1 23 427 449 427 449 0.95

14 16 3.1e-05 0.013 19.0 0.4 2 23 456 478 455 478 0.93

15 16 4e-05 0.017 18.7 1.3 2 23 485 506 484 506 0.95

16 16 8.3e-06 0.0035 20.8 1.9 1 23 512 534 512 534 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.23	95	6.9	0.0	7	23	42	58	42	58	0.92
2	16	4.5e-05	0.019	18.5	1.9	1	23	92	114	92	114	0.97
3	16	0.0037	1.6	12.5	0.2	5	19	124	138	123	143	0.93
4	16	0.36	1.5e+02	6.2	0.2	7	23	158	174	152	174	0.89
5	16	2.8e-06	0.0012	22.3	2.7	1	23	180	202	180	202	0.99
6	16	3e-05	0.013	19.0	1.1	1	23	208	230	208	230	0.97
7	16	7.6e-07	0.00032	24.1	1.7	1	23	236	258	236	258	0.95
8	16	0.00072	0.3	14.7	0.7	5	23	290	308	288	308	0.94
9	16	0.00079	0.33	14.6	1.5	1	23	314	336	314	336	0.95
10	16	2e-05	0.0086	19.6	1.9	1	23	342	364	342	364	0.97
11	16	0.002	0.83	13.3	0.2	2	23	371	393	370	393	0.88
12	16	8.9e-08	3.7e-05	27.0	2.6	2	23	400	421	399	421	0.96
13	16	3.9e-06	0.0017	21.8	0.6	1	23	427	449	427	449	0.95
14	16	3.1e-05	0.013	19.0	0.4	2	23	456	478	455	478	0.93
15	16	4e-05	0.017	18.7	1.3	2	23	485	506	484	506	0.95
16	16	8.3e-06	0.0035	20.8	1.9	1	23	512	534	512	534	0.97

Sequence Information

Coding Sequence: ATGCATTTGGTGATCTTACTTTCTACATCTGAGCGACGCAACAAATTATTTGCACCATTAATAGTATCAGAACAGATTACAGCGACTGATGCAAATTCAGACCTTAATAAAAACCATGACTATGGAAAGTCGTTTGCTTCACCGCAGAACCTCCAGGAACATGAAAGCGCACATTTTAATCCTAACTCAGATTATTCTGTACTTTGCAACAACGCATCCGCATTCTTGCAAGATGCAAAGCCTCAAAGGCTTTATCATTCCAATACACTAAAACATAAATGCGGTGAATGTGGAAAGTTATTTTCAAGCGTTCATACATTGAAGGCTCATCAAATTATACATTCAAATCCAAATATGCTGAAGTAtgagatatgcaacaaatcattttcaCGACCATCTGGTTTAAATGAACATGACAAATTTTATCATACAAGCCCAGAAATGAATCAAAAACATACATGCGAGGAATCCGGAAAATCATTTTCAAGGGCTCTAAGTTTGAAAGATCATGTAGCTCTTCATACCAATCCTGATTTATTCAAATGTGATATCTGTGGAAAGTCGTTCAAAACTACCGCTACATACAAATATCATCAAAGTACACATTCGAATCCTAATAAATTTACctgtgagatatgcaacaaatcGTTCACGTTATCCAGGTCTTTTAGAGCACATAAAGCTGTGCATGCTAATCCAGACCTATTTAAATGCAAGGAATGCGGAAAGTCATTTTCAAGAGCTCAGACATTGAAGACTCATCGAGTTCTTCATTCCAATCCTGACTTAAGTAAGTGCGATATATCTGAAAAGACTTTCAGTCATGATCATGCGGCACATTCGAATCTCGATGCATCCAAGAGTGAAATCTGCAACAAATCATTTACAACGTTAACAGATTTGAACCACCATAGAGCCTTGCATGCCAATCCAGATTTACATAAATGCAACGAATGTGGTTCATCATTTAGGTTGGCTCGGTCATTAAGAGATCACCTTGCTTTCCATTCTAATCCTGATTCGTTCAAGTGTGATTTATGTGGAAGATCATTCAAAACAGTTAATACCTTAAGGCAACATAAAAAGGGTCACTCAAATGCCAATATGCTGGAGTGTGAGATATGCAATAAATCATTCACGCTCCCATATTATGTGAAATTACATAAAGCTGCAATGCATACCAATGCAGGAGTATGTAAATGCAGTGAATGCGGGAAATCATTTAGGAGGGCTCGAAATTTGAAGCAGCATATGGCGGTACATTCTAATCCCGATTTATTTAAGTGCGATTTATGTGGAAAATCATTCGCAACAGCTCGAACCTTAAGACAACATAAAATTGGTCACTCAAATCCCAATATACTGAAGTGTGAGATATGCAGCAAATCATTTACGCTTCCATATAATTTGAAATTACATAAAGCTGTTATGCATACCAATGCAGGAGTATGTAAATGCAGTGAATGCGGGAAATCATTCAGATGGGCTCAAGCTTTGAAGCGGCATATGGCTCTACATTCTAATCCCGATTTATTTAAGTGCGATTTATGTGGAAAGTCATTTAGCAAAGCTTTTACATTAAGACAACATAAAACAATCCATTCAAATGCCAGTACATAA
Protein Sequence: MHLVILLSTSERRNKLFAPLIVSEQITATDANSDLNKNHDYGKSFASPQNLQEHESAHFNPNSDYSVLCNNASAFLQDAKPQRLYHSNTLKHKCGECGKLFSSVHTLKAHQIIHSNPNMLKYEICNKSFSRPSGLNEHDKFYHTSPEMNQKHTCEESGKSFSRALSLKDHVALHTNPDLFKCDICGKSFKTTATYKYHQSTHSNPNKFTCEICNKSFTLSRSFRAHKAVHANPDLFKCKECGKSFSRAQTLKTHRVLHSNPDLSKCDISEKTFSHDHAAHSNLDASKSEICNKSFTTLTDLNHHRALHANPDLHKCNECGSSFRLARSLRDHLAFHSNPDSFKCDLCGRSFKTVNTLRQHKKGHSNANMLECEICNKSFTLPYYVKLHKAAMHTNAGVCKCSECGKSFRRARNLKQHMAVHSNPDLFKCDLCGKSFATARTLRQHKIGHSNPNILKCEICSKSFTLPYNLKLHKAVMHTNAGVCKCSECGKSFRWAQALKRHMALHSNPDLFKCDLCGKSFSKAFTLRQHKTIHSNAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -