Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:410232527-410238790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.99 4.2e+02 4.8 0.0 2 16 173 187 173 189 0.85

2 16 8.5e-06 0.0036 20.8 2.5 2 23 277 298 276 298 0.98

3 16 0.00032 0.14 15.8 3.9 1 23 303 325 303 325 0.97

4 16 8.7e-05 0.037 17.6 0.2 2 23 330 351 329 351 0.97

5 16 1.1e-05 0.0046 20.4 2.7 1 23 357 379 357 379 0.97

6 16 0.00014 0.061 16.9 2.2 1 23 385 407 385 407 0.96

7 16 0.0024 1 13.1 1.2 2 23 412 433 411 433 0.96

8 16 0.0022 0.94 13.2 7.9 1 23 439 461 439 461 0.97

9 16 2.4e-05 0.01 19.4 0.8 2 23 466 487 465 487 0.96

10 16 4.9e-05 0.021 18.4 1.7 1 23 493 515 493 515 0.97

11 16 6.5e-06 0.0027 21.1 3.7 1 23 521 543 521 543 0.99

12 16 0.0031 1.3 12.7 2.1 2 19 548 565 548 571 0.93

13 16 3.1e-07 0.00013 25.3 0.7 1 23 577 599 577 599 0.98

14 16 9e-07 0.00038 23.8 0.2 2 23 604 625 603 625 0.95

15 16 7.9e-05 0.033 17.7 0.7 1 23 631 653 631 653 0.94

16 16 9.5e-07 0.0004 23.8 0.5 2 23 660 681 659 681 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.99	4.2e+02	4.8	0.0	2	16	173	187	173	189	0.85
2	16	8.5e-06	0.0036	20.8	2.5	2	23	277	298	276	298	0.98
3	16	0.00032	0.14	15.8	3.9	1	23	303	325	303	325	0.97
4	16	8.7e-05	0.037	17.6	0.2	2	23	330	351	329	351	0.97
5	16	1.1e-05	0.0046	20.4	2.7	1	23	357	379	357	379	0.97
6	16	0.00014	0.061	16.9	2.2	1	23	385	407	385	407	0.96
7	16	0.0024	1	13.1	1.2	2	23	412	433	411	433	0.96
8	16	0.0022	0.94	13.2	7.9	1	23	439	461	439	461	0.97
9	16	2.4e-05	0.01	19.4	0.8	2	23	466	487	465	487	0.96
10	16	4.9e-05	0.021	18.4	1.7	1	23	493	515	493	515	0.97
11	16	6.5e-06	0.0027	21.1	3.7	1	23	521	543	521	543	0.99
12	16	0.0031	1.3	12.7	2.1	2	19	548	565	548	571	0.93
13	16	3.1e-07	0.00013	25.3	0.7	1	23	577	599	577	599	0.98
14	16	9e-07	0.00038	23.8	0.2	2	23	604	625	603	625	0.95
15	16	7.9e-05	0.033	17.7	0.7	1	23	631	653	631	653	0.94
16	16	9.5e-07	0.0004	23.8	0.5	2	23	660	681	659	681	0.96

Sequence Information

Coding Sequence: ATGAATGACAACCTCCCTCAGCATATCTGCGATCAATGTACTGTTGAATTAAAGGAGACATATTGCTTAAGATTGCTTTACGCCATTACTTCTGCTAAAATGAAGAATTTGTTGCAATCCGCAAGACGTGCGACTGAATTTCCATCAGATGTAGATGAGCTTAGAGATGAAGCTTCTATCATCAAGAAATCAGACAGTAGTCAAAGCGACTGTAGTAAGTTTTACGCTGAAATTTTCGAAGTTTTCATTATCTTGTACGTATACGCAGGCTTAGCGAATAAAAAATGCGAAGAAAGTGGAATAAATGCAGAGGTACATGAGCCTGACGGAAAAATGACAGGTTTAATAAGTAAGTGCAATTACGAACTTATTTCGGATGAGGAAAAATATGTAGGAAACAACAATGGCCGTTATTTGAAGGGGATGTCAGGTAATCTGCAGGATAAAGGAGGGTCAACTGCTGAAATTCCAACTGTGATGGGAAAACCAATGACAGACTTGAATGCAGAGAGCAATACATGTGAGAAATGTGGCGAAGTATACAACATGAAGATTGATCTCATCAGTGGAAAACAAATCTCACCGCAACGAACACATGTTTGCCAAATTTATAGTCAATTGACTGCTTCGGAAAGTAATGAAGGAACTAACTCAGGCTGTGAAATCTACAAACCTGAAGTTAGCGGCGTAGTGTCTGAAGTAGTACCTTCCTTTAAATTGCAAGAAGTATCCAAAGAAGGATCATTaagtgaaaaaaagaataaaaataagatTAAGAAAACTTTAAGTGGGGGACATAAATCCTCGCCTTCTATTTCGAAATCAAATAAGTGTGATCAATGCGATAAGTCATTTACTAAATTAAAAAACTTAAAGGAGCATCTAACCACGCATAAAAATGCCATCTATAAGTGCGAAACATGTGAGAAATCTTTTAAGTCACTCAGATACTTGAAACTGCATAAATTTTCACACTCTAATCAAAATAAATGTGTTGAATGTGGTAAATCCTATGCCGTGCTACGAAATTTAAAAGAACATATGGAGCTCCACGCATATCCTGATCGCTATAGATGTGATGAATGTGGGAAATCATGTTCTagctcaaaaaaattaaaacaacatctAGCCCTGCATAAGAATCGCGGCAGCTATAAGTGTGATAAATGTGGGAAATTGTTTAATTCATCACGATCCCTCAAGTTGCATGAATTTTCACATTCTGATCAAAATAAATGTGATCAATGCGGTAAATTATGCACTTCATTGTATTACCTAAACGTACATCTAGCCTTGCATAAGAATCCCGATATCTATAAGTGCGACAAATGTGAGAAATCCTTTAGGTCAGTTCAACATTTGCATAAGCATAAATTTTCACACTCAGATAAAAATAAATGTGATGTATGTAGTAAATCATTTGCCTCACAACGATATTTAAAAGAGCATATGGACCTCCACTCTAATCCTGATTGCTATCGGTGCGATGAATGTGACAAATCATTTTCTACCTCACGATGGTTAAAATTCCATCTAACAATGCATTCAAATCGAGACGGCTATAAGTGTCATGAATGTGGGAAATCGTTTAAATTAGCGCAATATTTGAAGCAGCATAAAATCACACATTCGAAGCAAAACACATGTGATGAGTGCGGTAAATCATTTTCTCAATTAAGCATTTTAAAAAAGCATTGCAAGCAAGCATTGCACGCAAATCCTGACCTCTATGAATGCGATGAATGCGGCAAGTCCTTTAGGAGAGCAACAAGTTTGAAGGAACATAAACTGATGCATTCGGGTTCAGttaaatgtgatgaatgtggTAAATCATTTACTAGAGCTCGAAACTTAGAAATCCACCGAGCCTTGCATTTGAATCCGTATTGCTACAAGTGTGATATATGTGAGAAGTCATTCACTACTCCGTTAGTTCTTAAGAAACATAAAGTCTTGCACTCGAATCCAGACCGCAATAAGTGCAATGAATGTGGAAAATCGTTTTCCTCCTTAAACAACTTACAAATTCATCAAGCATTGCATACAAATCCCGAACACTAA
Protein Sequence: MNDNLPQHICDQCTVELKETYCLRLLYAITSAKMKNLLQSARRATEFPSDVDELRDEASIIKKSDSSQSDCSKFYAEIFEVFIILYVYAGLANKKCEESGINAEVHEPDGKMTGLISKCNYELISDEEKYVGNNNGRYLKGMSGNLQDKGGSTAEIPTVMGKPMTDLNAESNTCEKCGEVYNMKIDLISGKQISPQRTHVCQIYSQLTASESNEGTNSGCEIYKPEVSGVVSEVVPSFKLQEVSKEGSLSEKKNKNKIKKTLSGGHKSSPSISKSNKCDQCDKSFTKLKNLKEHLTTHKNAIYKCETCEKSFKSLRYLKLHKFSHSNQNKCVECGKSYAVLRNLKEHMELHAYPDRYRCDECGKSCSSSKKLKQHLALHKNRGSYKCDKCGKLFNSSRSLKLHEFSHSDQNKCDQCGKLCTSLYYLNVHLALHKNPDIYKCDKCEKSFRSVQHLHKHKFSHSDKNKCDVCSKSFASQRYLKEHMDLHSNPDCYRCDECDKSFSTSRWLKFHLTMHSNRDGYKCHECGKSFKLAQYLKQHKITHSKQNTCDECGKSFSQLSILKKHCKQALHANPDLYECDECGKSFRRATSLKEHKLMHSGSVKCDECGKSFTRARNLEIHRALHLNPYCYKCDICEKSFTTPLVLKKHKVLHSNPDRNKCNECGKSFSSLNNLQIHQALHTNPEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -