Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017740.1:278499604-278515004[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.3 5.5e+02 4.4 6.6 1 23 42 65 42 65 0.97

2 20 0.00056 0.24 15.1 0.1 1 23 71 93 71 93 0.98

3 20 0.043 18 9.1 0.2 2 23 99 120 99 120 0.97

4 20 0.43 1.8e+02 6.0 4.8 1 23 126 149 126 149 0.95

5 20 6.7e-07 0.00028 24.2 1.6 1 23 176 198 176 198 0.98

6 20 7.3e-06 0.0031 21.0 0.9 1 23 204 226 204 226 0.97

7 20 1.9e-07 7.9e-05 26.0 1.2 1 23 232 255 232 255 0.98

8 20 0.0031 1.3 12.7 1.0 1 23 265 288 265 288 0.92

9 20 1.7e-07 7e-05 26.2 1.6 1 23 393 415 393 415 0.98

10 20 1.7e-07 7e-05 26.2 0.8 1 23 421 443 421 443 0.99

11 20 0.024 10 9.9 1.2 1 23 454 476 454 476 0.97

12 20 1.6e-06 0.00066 23.1 2.4 1 23 482 504 482 504 0.97

13 20 0.061 26 8.6 3.0 1 19 540 558 540 562 0.82

14 20 0.00015 0.065 16.8 2.5 1 23 568 590 568 590 0.98

15 20 3.3e-05 0.014 18.9 1.0 2 23 597 618 596 618 0.97

16 20 0.0061 2.6 11.8 3.3 1 23 624 646 624 646 0.98

17 20 8.1e-07 0.00034 24.0 0.9 1 23 773 795 773 795 0.98

18 20 0.51 2.1e+02 5.7 3.7 1 23 801 823 801 823 0.96

19 20 6.7e-05 0.028 17.9 0.0 1 23 830 852 830 852 0.97

20 20 0.00016 0.068 16.7 4.7 1 23 858 880 858 880 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.3	5.5e+02	4.4	6.6	1	23	42	65	42	65	0.97
2	20	0.00056	0.24	15.1	0.1	1	23	71	93	71	93	0.98
3	20	0.043	18	9.1	0.2	2	23	99	120	99	120	0.97
4	20	0.43	1.8e+02	6.0	4.8	1	23	126	149	126	149	0.95
5	20	6.7e-07	0.00028	24.2	1.6	1	23	176	198	176	198	0.98
6	20	7.3e-06	0.0031	21.0	0.9	1	23	204	226	204	226	0.97
7	20	1.9e-07	7.9e-05	26.0	1.2	1	23	232	255	232	255	0.98
8	20	0.0031	1.3	12.7	1.0	1	23	265	288	265	288	0.92
9	20	1.7e-07	7e-05	26.2	1.6	1	23	393	415	393	415	0.98
10	20	1.7e-07	7e-05	26.2	0.8	1	23	421	443	421	443	0.99
11	20	0.024	10	9.9	1.2	1	23	454	476	454	476	0.97
12	20	1.6e-06	0.00066	23.1	2.4	1	23	482	504	482	504	0.97
13	20	0.061	26	8.6	3.0	1	19	540	558	540	562	0.82
14	20	0.00015	0.065	16.8	2.5	1	23	568	590	568	590	0.98
15	20	3.3e-05	0.014	18.9	1.0	2	23	597	618	596	618	0.97
16	20	0.0061	2.6	11.8	3.3	1	23	624	646	624	646	0.98
17	20	8.1e-07	0.00034	24.0	0.9	1	23	773	795	773	795	0.98
18	20	0.51	2.1e+02	5.7	3.7	1	23	801	823	801	823	0.96
19	20	6.7e-05	0.028	17.9	0.0	1	23	830	852	830	852	0.97
20	20	0.00016	0.068	16.7	4.7	1	23	858	880	858	880	0.99

Sequence Information

Coding Sequence: ATGGCTTACGAATCAACTGAATCAGTCAATATAAATGCTCAGGGAAAAGTTGAATTAAAACTAGACCTTCCAATCAATATCAATTCCCTAAAATCCAATGAAAACGAGGAAGTAATCCAGGAGTATTCTTGCGAACTATGCTTCGAAAAATTTCATTCACACAACTTTCTACAGTTGCACAAACAAACCACACACATATGCCTTAAACAATTTCGTTGTGAAAAATGTCCTGAACAATTTAACTTGGAGAAAAATCTTATCATACATATTGCCAGTCATGATAAGGCGCCCGCGACATGTCTTGAGTGTGGAATAAACTTTCAACGAACTGCAGGATATCGCGGTCATTTAAAGATGCATATGATAAATGATAATTTCCACTGCAAGAAATGTGAAGAGGATTTTGAGTTTGAAACACATTACCGACAGCATGTTGAAAGTAATCACACTCAATTAGAAGAAAATGATGGTGTTCCCAGAATGCAAGAGAGAGGTCGACTTGAAGGCAAAGCAAAGTATCGGCCATTCAGCTGTGAGTTATGTGGGAAAAAGTACACAAAAGCAAGTAACTTAAATAGACATCGATTGACACACAGCGACGTGAAACCATTTCAGTGCAGCATATGTTCATTGGGGTTCACCCAGAAGTCAAGTTTACAACGTCATTATCTCGCACATTCTGATGAAAAGTCATTCAAATGCCCAAAATGCTCAATGAGCTTCTCACAACGTGGAAATCTTCAAACTCACATTCGACGAGTTCATCCAAAAAGTACAGATTTAACCAATAAATTTCCATGTCCAAACTGCAGCTGTGTTTTCAACAAATTAAATAGTCTGAATCGTCATTCAGCTGTAGAACATGCAAACAAGCTATCGTCAATCGATGACAATCAAGATGAAGATTCGGAATATTCCTTTAACAAAGTCATGACACAATTAAAAGACTTGCAAAGAGACATGAATTTGCCAACAAATAATCTAAGCAGTAATTCATTGTGTCCAATAGAAAATTTGAATATTCTCGAAAATACGTCTGTACATGATCGCAGAGAATCAAACAAATGTACAGAAGAAAATGGAAGCCTCGTGAAAATTGTAGAAATATTAAATGCCGAAGAGGAAAAATCTGAAGTCATCGTAAAACAAGTGGAAAGAAATGATGGGAAGAAATACTATAGTTGTAATCACTGCTCAAAAATCTTCCCAAGACCGTATAATTTGTTAAGACATATTCGAGTTCATACAAAAGAAAAGCCATATGAATGTGGGATTTGTGGTCGTTGCTTCTCCATCAAAAGTAATCTTCAAGTTCATCTTCGAATCCACGGTAAAGATAATAAGCACATCACAAACTGTTTTCAGTGCCCGGAATGTTTTACGCAATTCAGCTCCGTGCGGCAACTTGATTTTCATGTTCGAACTCACCCCGACTTAAAACTATTTCCTTGTGACATCTGTGGAAAACATTTCCGCAACAACAATAATTTACGTGCTCATAAATACACTCATCGGTATGATAGCAGAAAAAAGAAGGAGCTTCTGAGCCGTTTAGAATCACCAATCACGGAAGACGATTTTTCAAATGAGCCCAAAAATATAGCGGATGACCGAAGATTTCAATGTTCTATTTGTGGATTGAAATTCAAACGATTTTCACATCCTTCACAGCATGAGTTTAATCATTCGGGGTTGAAACCATTTCAGTGTTTGACCTGCAAAAGGCAATTTACAGCTAAAAGTTCTTTGAATACACATCAGAAAATCCATTCGGGTCACAAGACTAAACAATGCGATGAATGCGGAGTCAAATTCCGTTCGAATACGGAATTGAAAAGGCATAAAGCGATGCACAGCTCTATCCGACCTTATGCATGCCCATACTGTATGAAATCATTTAAGACAAATATAACATGTAAGAGGCATATTTTAACCCATTACAATGAATTATCTGAGTCAACATATAAAGCCATGAAAGGCTCCAGAAACTTTATCCAAGACGATTTACTTCAACCACAAATTTCACAACATCCCGAAAACCAGAATTACGTATTCGACACTGATTCAGCAAGCCAAATCAGTGCTGATGAAttagatttaaaattaaatccgatCACCGACCAAAATAAGAAGCAAAAGGCGAACTCAccaaaattcattgaaattaaggaGTTAATTCATTTAAATCCCACAAAGGCGTTAATCAAATCCATAACTGTCGAATCTGTAAATAATCCAATATCCTTGTTAAATCCTATGCAAGCCACCCCGTCATCAGTTGAAACCTCTCTTCAAATACAAACCACGGCCAGGAAGCACGTCTGCGAAACATGTGGTCGTGGTTTTAAAAAGCCAATTGATCTTCAGCGGCATATTCGAACACACACGGATGAACGGCCATTTAAATGCAATTTGTGTGATGCTGCATTCAAATTAAAGTGCACTTTGGACTGCCATATGCTAATTCACGATCAAAATCGTTTGAAATTCGACTGTTCAGTTTGTGGGAAAGCATATGCTTCGCAAGATGTTTTATCAGTTCATCTTCGAATTCATACAAATGAACGACCATATAAGTGTTCGTTGTGTGCAAAAACCTTTCGGACAACAGGACATCGTAATTCGCATATGCGGACACATTCGAAATCATCAAAAGGAAAGGGAAAATCcaagaaaattatcaaaaagtcCGCAGTAATTCTAAATGTAGCGCCAGCGAATTTAGATAATAGATAA
Protein Sequence: MAYESTESVNINAQGKVELKLDLPININSLKSNENEEVIQEYSCELCFEKFHSHNFLQLHKQTTHICLKQFRCEKCPEQFNLEKNLIIHIASHDKAPATCLECGINFQRTAGYRGHLKMHMINDNFHCKKCEEDFEFETHYRQHVESNHTQLEENDGVPRMQERGRLEGKAKYRPFSCELCGKKYTKASNLNRHRLTHSDVKPFQCSICSLGFTQKSSLQRHYLAHSDEKSFKCPKCSMSFSQRGNLQTHIRRVHPKSTDLTNKFPCPNCSCVFNKLNSLNRHSAVEHANKLSSIDDNQDEDSEYSFNKVMTQLKDLQRDMNLPTNNLSSNSLCPIENLNILENTSVHDRRESNKCTEENGSLVKIVEILNAEEEKSEVIVKQVERNDGKKYYSCNHCSKIFPRPYNLLRHIRVHTKEKPYECGICGRCFSIKSNLQVHLRIHGKDNKHITNCFQCPECFTQFSSVRQLDFHVRTHPDLKLFPCDICGKHFRNNNNLRAHKYTHRYDSRKKKELLSRLESPITEDDFSNEPKNIADDRRFQCSICGLKFKRFSHPSQHEFNHSGLKPFQCLTCKRQFTAKSSLNTHQKIHSGHKTKQCDECGVKFRSNTELKRHKAMHSSIRPYACPYCMKSFKTNITCKRHILTHYNELSESTYKAMKGSRNFIQDDLLQPQISQHPENQNYVFDTDSASQISADELDLKLNPITDQNKKQKANSPKFIEIKELIHLNPTKALIKSITVESVNNPISLLNPMQATPSSVETSLQIQTTARKHVCETCGRGFKKPIDLQRHIRTHTDERPFKCNLCDAAFKLKCTLDCHMLIHDQNRLKFDCSVCGKAYASQDVLSVHLRIHTNERPYKCSLCAKTFRTTGHRNSHMRTHSKSSKGKGKSKKIIKKSAVILNVAPANLDNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -