Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:410163354-410166006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.5 1e+03 3.6 0.2 2 16 94 111 93 112 0.88

2 17 7.4e-06 0.0031 21.0 1.8 2 23 204 225 203 225 0.97

3 17 0.00028 0.12 16.0 3.4 1 23 230 252 230 252 0.97

4 17 8.9e-05 0.038 17.6 1.1 2 23 257 278 256 278 0.96

5 17 1.2e-06 0.00052 23.4 0.8 1 23 284 306 284 306 0.97

6 17 3.3e-05 0.014 18.9 2.6 1 23 312 334 312 334 0.96

7 17 6.8e-05 0.029 17.9 1.1 2 23 339 360 338 360 0.96

8 17 0.0003 0.13 15.9 3.6 1 23 366 388 366 388 0.97

9 17 9.7e-05 0.041 17.4 0.6 2 23 393 414 392 414 0.97

10 17 0.00044 0.18 15.4 0.7 1 23 420 442 420 442 0.93

11 17 1.7e-06 0.00072 23.0 1.3 1 23 448 470 448 470 0.99

12 17 9.6e-07 0.00041 23.7 0.5 2 23 475 496 474 496 0.96

13 17 1.8e-05 0.0077 19.7 0.1 1 23 502 524 502 524 0.94

14 17 0.00011 0.048 17.2 0.8 2 23 529 550 528 550 0.96

15 17 4.8e-07 0.0002 24.7 0.4 1 23 556 578 556 578 0.97

16 17 8.3e-07 0.00035 24.0 0.2 2 23 583 604 582 604 0.95

17 17 0.0016 0.67 13.6 0.5 1 23 610 632 610 632 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.5	1e+03	3.6	0.2	2	16	94	111	93	112	0.88
2	17	7.4e-06	0.0031	21.0	1.8	2	23	204	225	203	225	0.97
3	17	0.00028	0.12	16.0	3.4	1	23	230	252	230	252	0.97
4	17	8.9e-05	0.038	17.6	1.1	2	23	257	278	256	278	0.96
5	17	1.2e-06	0.00052	23.4	0.8	1	23	284	306	284	306	0.97
6	17	3.3e-05	0.014	18.9	2.6	1	23	312	334	312	334	0.96
7	17	6.8e-05	0.029	17.9	1.1	2	23	339	360	338	360	0.96
8	17	0.0003	0.13	15.9	3.6	1	23	366	388	366	388	0.97
9	17	9.7e-05	0.041	17.4	0.6	2	23	393	414	392	414	0.97
10	17	0.00044	0.18	15.4	0.7	1	23	420	442	420	442	0.93
11	17	1.7e-06	0.00072	23.0	1.3	1	23	448	470	448	470	0.99
12	17	9.6e-07	0.00041	23.7	0.5	2	23	475	496	474	496	0.96
13	17	1.8e-05	0.0077	19.7	0.1	1	23	502	524	502	524	0.94
14	17	0.00011	0.048	17.2	0.8	2	23	529	550	528	550	0.96
15	17	4.8e-07	0.0002	24.7	0.4	1	23	556	578	556	578	0.97
16	17	8.3e-07	0.00035	24.0	0.2	2	23	583	604	582	604	0.95
17	17	0.0016	0.67	13.6	0.5	1	23	610	632	610	632	0.88

Sequence Information

Coding Sequence: ATGTTGGCATTGCATACGGTCTTGGCGATTCAATACTTATTAGCTACACAGATGCAAATCATGCCCACTACTGGATATGCGTTTCTGATAGCAGGAGGAGTGGTTAGGTGGAGAAGCCAACTTCAGAGAACATTTGCAATTTCAATCGATTTCAATTTCAATCGGAATACATTGCGATGTGCGAAGGAACAAAGGAAGCTATGTGGTTGCGAGACTTATAGGAGGAAATTGGATTTAAGCAGGATCAGCCTACCAACTTGTTTGTTGACAACCAAAGTGCGATGCAATACATATCAGAAATGTGGCGAATTCTACAACACGAAGACTGATCTCATCGGTGGAAAACAAATCTCACCCGAACGAACACATGTTTGCCAAATTTACAGTCATATGCTAAAATCGACTGCTTCGGAAAGTAAGGAAACAACCAAGTCTGGCTGTGAAATCTACAAACCTGAAGTTAGTGGTGTAATGTCTGAAGTAGCACCTTCCTTTAAATTGCAAAAAGCATCCAAAGAAGGATCATTAAGTGAGAAGGGTAGTAAAATTAAGATTAAGAGTACTTTCAATGGGCGACATAAATCTTCGCACtctatttcgaaattaaataaGTGTGATAAATGCGATAAGTCATTTACTAAATTAAAAAACTTAAAGGAGCATCTAGCCTCGCATTCGAATGCCATATATAAGTGCGAAAAATGTGAGAAACCTTTTAAATCGCTCAAATACTTGAAACTGCATAAATTTTCACACTCTAATCAAAACAAATGTGTTGAATGTGGTAAATCCTATTCCGTACTGCGACATTTAAAAGAGCATATGGATCTCCACGCGTATCCTGATCGCTATAGATGTGATGAATGTGGGAAATCATTTTCTAGCTCAAAAAGATTACAACAACATCTAGCTCTGCATACGAATCGCGGCAGCTATAAGTGTGATAAATGTGGGAAATTGTTTAATTCGTCACAATCTTTGAAGCGGCATGAATTTTCCCATTCTGATCAAAATAAATGTGATCATTGCGGTAAATTATTCACTTCATTGTATTACCTAAACGTACATCTAGCCTTGCATAAGAATCCCGATATCTATAAGTGCGACAAATGTGAGAAATCCTTTAAGTCAGTTCAATATTTGAATCAGCATAAATTTTCACACTCAGATAAAAATAAATGTGATGTATGTGGTAAATCATTTGCCATAATACGACATTTAAAAGAGCATATGGACATCCACTCTAATCCTGATCGCTATAGGTGCGATGACTGTGAGAAATCATTTTCATCCTTAGGATGGTTAAAATTTCATCTAACATTGCATTCGAATCGAGACGGCTATAAGTGTGATGAATGTGGGAAATCGTTTAAATTACCGCAATATTTGAAGCAGCATAAAATCACACATTCTAAGCAAAACAAATGTGATGAATGCGGTAAATCATTTTCTCGATTAAGCACTTTGAAAGAGCATTTAGCCTTGCACTCGGATCCTGACCAATATAGGTGCGATGAGTGTGGGAAATCTTTTGGCACAGCAAGTGGTTTGCAGGGACATAAAGCAGCGCATTCAGGTATGACTAAATGTAATGAATGTGGCAAACTCTTTTCGACATTACAAACTTTTAAAGCGCATTTAATCTTGCACACAAATCCTGACCTCTATGCATGTGATGAATGTGGAAAGTCCTTTACGAGAGCAACAAGTTTGAAGGAACATAAACAGATACATTCGGCTTCAGttaaatgtgatgaatgtggTAAATCATTTACTAGAGCTCGAAACTTAGAAATCCACCGAGCCTTGCATTTGGATCCGTACTGCTACAAGTGTGATATATGTGAGAAGTCATTCACTTCTCCGTTAATTCTTAAGCAACATAAAGTCTTGCACTCGAATCCAGACCGCAAAAAGTGA
Protein Sequence: MLALHTVLAIQYLLATQMQIMPTTGYAFLIAGGVVRWRSQLQRTFAISIDFNFNRNTLRCAKEQRKLCGCETYRRKLDLSRISLPTCLLTTKVRCNTYQKCGEFYNTKTDLIGGKQISPERTHVCQIYSHMLKSTASESKETTKSGCEIYKPEVSGVMSEVAPSFKLQKASKEGSLSEKGSKIKIKSTFNGRHKSSHSISKLNKCDKCDKSFTKLKNLKEHLASHSNAIYKCEKCEKPFKSLKYLKLHKFSHSNQNKCVECGKSYSVLRHLKEHMDLHAYPDRYRCDECGKSFSSSKRLQQHLALHTNRGSYKCDKCGKLFNSSQSLKRHEFSHSDQNKCDHCGKLFTSLYYLNVHLALHKNPDIYKCDKCEKSFKSVQYLNQHKFSHSDKNKCDVCGKSFAIIRHLKEHMDIHSNPDRYRCDDCEKSFSSLGWLKFHLTLHSNRDGYKCDECGKSFKLPQYLKQHKITHSKQNKCDECGKSFSRLSTLKEHLALHSDPDQYRCDECGKSFGTASGLQGHKAAHSGMTKCNECGKLFSTLQTFKAHLILHTNPDLYACDECGKSFTRATSLKEHKQIHSASVKCDECGKSFTRARNLEIHRALHLDPYCYKCDICEKSFTSPLILKQHKVLHSNPDRKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -