Oorn147941.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontomyia ornata
Gene Symbol
-
Assembly
GCA_963969285.1
Location
OZ017742.1:270028709-270061016[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 1.5e-05 0.0065 20.0 1.4 1 23 103 125 103 125 0.99
2 23 0.0087 3.7 11.3 0.1 2 23 133 154 132 154 0.93
3 23 0.00057 0.24 15.0 1.6 1 23 165 187 165 187 0.98
4 23 0.013 5.3 10.8 4.6 1 23 201 223 201 223 0.97
5 23 0.00038 0.16 15.6 1.8 2 23 228 249 227 249 0.96
6 23 6.6e-05 0.028 18.0 0.5 1 23 255 277 255 277 0.98
7 23 0.0011 0.47 14.1 0.6 3 23 286 306 285 306 0.98
8 23 0.0037 1.5 12.5 0.3 3 23 343 363 341 363 0.97
9 23 0.00011 0.047 17.3 0.5 1 23 369 391 369 391 0.98
10 23 0.00012 0.051 17.1 0.3 3 23 399 419 397 419 0.96
11 23 2.5e-06 0.001 22.5 1.5 1 23 615 637 615 637 0.99
12 23 9.1e-06 0.0038 20.7 0.9 2 23 649 670 648 670 0.97
13 23 0.00037 0.16 15.6 0.6 1 23 677 699 677 699 0.97
14 23 3.9e-05 0.017 18.7 0.3 1 23 716 738 716 738 0.97
15 23 1.2e-05 0.0052 20.3 0.5 1 23 747 769 747 769 0.99
16 23 2.3e-05 0.0097 19.4 0.4 1 23 775 797 775 797 0.99
17 23 0.038 16 9.3 7.8 1 23 803 825 803 825 0.98
18 23 2.4e-05 0.0099 19.4 0.4 1 23 831 853 831 853 0.95
19 23 0.02 8.3 10.2 0.5 1 23 859 881 859 881 0.97
20 23 9.7e-06 0.0041 20.6 1.7 1 23 887 909 887 909 0.98
21 23 2.1e-06 0.0009 22.7 0.4 1 23 915 937 915 937 0.98
22 23 1.1e-05 0.0047 20.4 2.2 1 23 943 965 943 965 0.99
23 23 0.00031 0.13 15.9 0.2 1 23 971 993 971 993 0.98

Sequence Information

Coding Sequence
ATGAAATGTGTGACGGTTCGCTTAACAAAATTGAAATCGATGCCTAGCAAGAACAATTTATTCAAGAAACACATGACTAGAAATCCTTTTAAGAAGAATAAAGTAAGACAATTTCATATCCCTTTAAAAGCCGTCAAATGGGTGTATAACTTTGAACCGTTAAAGAGACCAAAACTAAATGGGCTCCATGAAGAAACAATCGAATTCGAAGAAGATTCCGAAATAGGCCCTCCAATTTTAGAAGATAATAGTCAAGAGATGACCCTACTAAAGGATAATGAAGAAAGTTTGACAGAGAGATCAAGTTTTAAATGTGAAATTTGTCAACAAACATTCGCGATGAAAATCAGTTACAATCGTCATATACGAACTCATACGAGACAAAAAGGACCAATTGAATGTCCAGTGTGTAATGCCCGATTTAGTAGTCAAAGTGTCTTTGAAGTGCATTCCTTTATGCATAGCGTTACCAAAAAGCGATCATTGAATACTTTCAATTGTTCTCAATGTTCTCGTaaattttccactcaaatggcTTTCGATGCGCACCTTCGATCTCACGAtgttgaagaaaagaaaaaggatAAAATGATGGATGAACATAGATGTGATATATGCAACAAATTGTTCTATAACGCAAGAGCTTTATCATCGCACCGACATAGGCATGCTAAACGAAATAAATGCAGCATATGCTCGAAATCCTTTATGACAAAAGCCCAACTTGTTAACCATCTCGCGCATCATAAAGTCATGAAACCATATGCATGTGATGTGTGTAAAAAGGCATTTTCAGATAAATTACGTTTGAAAGCTCATTTGAAATCTCATAAAGACgaacatggatcggagctttgtTCATTATGTGGTGAACACTTTGATGATAACGAGCAGTATACGTTACACATCGAAACGCATAAATCAAAAGACTGTAGTACTTCattagaagaaaatataaacCACCGAAACGATTCAAGCACTCTTATAAACAATTTAGATGTGCCTCAATCTAAATTTCAATATGGCTGTGATATATGCGACGCCAGGTTCCCGAAACATGTAGAGTTAATTCGTCATAAGCAGATTCATTCAAAGGATAGTTCACACGTTTGTGAAATATGTGAACAAAAGTTTAATTTAGCATATGCACTAAAATTACATATGCGCATTCATTCTGATGGGAAGCAACTTGATTGCGGTCTTTGCGGAGAATCATTTGAAAATGATTCAGACCTTTGTGAACATATGAAAATCCATCGCAGTTTATCGGTGATCAGTGAAACCGGATCGCAAGAGCGAAAACCGTTTACTGATAAAGATAGAAATGACAACAaggaagaaattgtaacaccaaaggaatcaaaacattcagtcggtatcaaagaagaagttccagaagaggaattgttggcagatgtgaaaactttcatgcaaccagctgaaaacaaaattatagaaatagtaacaaatgaagtcgacgagtttacaattgttgatgcgggaatcgaagtagaagtaacaccacaattgccacaggaaaacgaaattgatatatttgaagaaaatggaAATTACAATGAGCTGGAAGAGGGTGAAGTGGGTGAAGATTTAGCTGATGATAATTTGGAGCCTGATACGAGTGCGGATCCTGAAGTTAATGAAGATGAggacgatgatgaagatgatgatgacgacgaggattggcaaccactttccaaattgattgcacgaaatcaggagaataaactatcaacggcgatcagcgatgaaaatgatgagaatgatgataatcaaaaagttaGAAGAAAAAGAAGATCAAAATTTGATGATAGCCTGGAGAAATACACCTGCAATGTTTGCGATAAAGAATTCGATAAGAAATCTAGGTTGGCGCGTCATATGAAATCACACACAAGCGGACGAAGACGTAAAAAGGAACCCTTGGAATGTGATGTATGTAAGAAAACATTTGAGAAAAAATCGCGCCTTATACGTCACATGAATGTACACGATCCGGATGGTCGGCCATTCGAATGTGAAGTTTGCAAAGTAAGATTTGTGCATGAAAGCAACATGCGGCGACACGCCATTGTTCACACAGAAGTCATCAATGAATCTTCAACAATATTGAAACAGCAAACAGTTTTCAAATGTATTGAGTGTCCAAAAGAGTTCGCGAAACAAGAGTCATTAGCATCACATATGCGAACGCACAGAAGTAAAGGCGAGAAAAAATCGTATAAATGCGAAATATGCTCACAGGTGTATCCTCAATTGAATCTTTTAACGCGGCACATGAAAAGCCACGAAGAATATCGAAACTATCAGTGCAATATCTGTGGAAAACGATTCGCGTTGACTTCACGTTTAATCGATCATATTAATCGGCATAACGGTGTGAAGCCCCATGTGTGTCACTTCTGTAATAAAGCATTTTTGCAAAGCTGTACCCTTAAGGATCATTTACGAACGCATACAGGTGAGCAACCGTATCTATGCGCACAATGTGGCAAAGCGTTTAATAATGGTAGTAATTTACGGCAACATTTGCTACGACACACGGGCATCAAACCGTTCGCGTGTCCTGAATGCCCGAGTCGATTCGCCTGTAAGGGTGAACTCAAAGGACATATGACAACACATCAGAATATTAAGCCATATAGCTGCGAACAATGTGATTCGAAATTCACTAAAccacaatcgctgaaaaagcacaTGAGAATTCACACAGGAGAGCGGCCGTACGCCTGCGAGGCTTGTGGAATGACGTTTACATCATCATACCCTCTTAAACGACACATGCGAACGCACACGGGAGAGAAGCCTTACAAATGTAAATTCTGCGAGAGATCATTTGCACAAAGCAATGATTTAGTGAAACATACAAGAAGTCATGTTGGTGAGAATACTTATCAATGTGAAGAGTGTCCGGCAGCTTTCCGTTTACATAATGAATTGCGCGCGCATATTCAAGAACATTTCCGTGAGAAAAATGATCGCAAGGACTTAATGGATGACTTGAAAGTAGCACTAATGAAACAAAAAGCAGCTGCAGAACAAGGGAAATTTATGTCGGCAGCAATGCCTGCTATTATCAAGGAACCGGTGGAAGAGACAAGCACAAATGATCCTACATACCCGGATAGAATTTGTACCGAATGTATTGAGAAAATACAACAAACGTACAAATTTCTAGATAAATGCGAGAAGTCCGAAACATATTTGCATCGTGTGAATAACGAAAATGCCAAGGACGTTGATCAAATTAATGAGTTTATGGATATCTCAGAATATAAGGAAAATATTGCAGACTCTGATTTCGTTGAACCATCGCCACCTTTCTGCGAATTGTCATATAATCCAGCTTACGAAAAAATCAAAACAGAAGACGAACAGCAGACAAATCAGTTGGACGAGTCTTTCGctaattttataataaatatcGACGAAAATTTAATGTTTGAAATAACAGAAATTACTAACAGTGTGAATAATCCTTCATTTGATGAAACACAAACTGAAAAAAGTATTAAGCAATCTTCTCAGAAAAGTTCCGATATAGAGGCTCATAAATTGCTGAATGAAATATTCAGTGATGAAATAATTTCAAAAGACATTTCTAATCCGAAAACGGATAGACTGCTCGCTAGGGAAAACTACTCGACATGGAAGATTGCTGCGCAAGTGTTCTTAGATTTGGATAATCTTTGGATAACGACAATTGATTATGAACTCGATAAAGAAGGAAATCCCAAAACCGCTGTCGATCCTGAGAAGGATTGA
Protein Sequence
MKCVTVRLTKLKSMPSKNNLFKKHMTRNPFKKNKVRQFHIPLKAVKWVYNFEPLKRPKLNGLHEETIEFEEDSEIGPPILEDNSQEMTLLKDNEESLTERSSFKCEICQQTFAMKISYNRHIRTHTRQKGPIECPVCNARFSSQSVFEVHSFMHSVTKKRSLNTFNCSQCSRKFSTQMAFDAHLRSHDVEEKKKDKMMDEHRCDICNKLFYNARALSSHRHRHAKRNKCSICSKSFMTKAQLVNHLAHHKVMKPYACDVCKKAFSDKLRLKAHLKSHKDEHGSELCSLCGEHFDDNEQYTLHIETHKSKDCSTSLEENINHRNDSSTLINNLDVPQSKFQYGCDICDARFPKHVELIRHKQIHSKDSSHVCEICEQKFNLAYALKLHMRIHSDGKQLDCGLCGESFENDSDLCEHMKIHRSLSVISETGSQERKPFTDKDRNDNKEEIVTPKESKHSVGIKEEVPEEELLADVKTFMQPAENKIIEIVTNEVDEFTIVDAGIEVEVTPQLPQENEIDIFEENGNYNELEEGEVGEDLADDNLEPDTSADPEVNEDEDDDEDDDDDEDWQPLSKLIARNQENKLSTAISDENDENDDNQKVRRKRRSKFDDSLEKYTCNVCDKEFDKKSRLARHMKSHTSGRRRKKEPLECDVCKKTFEKKSRLIRHMNVHDPDGRPFECEVCKVRFVHESNMRRHAIVHTEVINESSTILKQQTVFKCIECPKEFAKQESLASHMRTHRSKGEKKSYKCEICSQVYPQLNLLTRHMKSHEEYRNYQCNICGKRFALTSRLIDHINRHNGVKPHVCHFCNKAFLQSCTLKDHLRTHTGEQPYLCAQCGKAFNNGSNLRQHLLRHTGIKPFACPECPSRFACKGELKGHMTTHQNIKPYSCEQCDSKFTKPQSLKKHMRIHTGERPYACEACGMTFTSSYPLKRHMRTHTGEKPYKCKFCERSFAQSNDLVKHTRSHVGENTYQCEECPAAFRLHNELRAHIQEHFREKNDRKDLMDDLKVALMKQKAAAEQGKFMSAAMPAIIKEPVEETSTNDPTYPDRICTECIEKIQQTYKFLDKCEKSETYLHRVNNENAKDVDQINEFMDISEYKENIADSDFVEPSPPFCELSYNPAYEKIKTEDEQQTNQLDESFANFIINIDENLMFEITEITNSVNNPSFDETQTEKSIKQSSQKSSDIEAHKLLNEIFSDEIISKDISNPKTDRLLARENYSTWKIAAQVFLDLDNLWITTIDYELDKEGNPKTAVDPEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-