Basic Information

Insect: Odontomyia ornata
Gene Symbol: SdhA
Assembly: GCA_963969285.1
Location: OZ017742.1:82693579-82699201[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-07 0.00015 24.5 0.0 2 45 14 57 13 57 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-07	0.00015	24.5	0.0	2	45	14	57	13	57	0.88

Sequence Information

Coding Sequence: ATGGAAACATCTAAGAGGCGGCGAGGTATGGGATGGACTCAGGAGCAGCTTAAATCAGCTATAGCATTTGTAGAATACCGCCGTATGTCACAACAAAAGGCGGTAGTTACTTTCGGTATCCCAAGAAGAACTTTGAGAAACCATTTGAACTCGGGAATCGAAGAAAAAAGAACTGGTCGAGCACATACACTAACTCATGCCCAAGAAAAGGGTTTAGCAAGACGAATCATTCGACTAGCTCAAGTAGGCGTACCGTTGACTCGCAGGATTCTGTATGATGAGTTAGATATTCCTCGACATCCAGAGCGTCTATATAACATGGATGAAAAAGTCTGCCGCCTAATTTTACACCACCAACAGCAAGTTCTTGCACAAAAGGGGATCAAGAGAGTCCATTTTATCGCACAGGAACATGCTGGAAACGTCATGTGTGTCAACGCTTCAGGCAATTCGGTCCCACGTATGATACTATTCAAAGGAAAAAGATTAAGGCTGGAATTCAACGACAATTTACCTGATGGCACAGTAGTCAGAATGGCACCAAAAGGTAGCATGACTACTGAATTGTTTATAGACCATCATCTTGCTAACTACAAATCACCCGGAAAATGTTTGCTAGTTTTTGATGGAGCTGCTTCTTACCTTGATGCTAGGATTGTGGATGTTGCAGATGAACACAACATAGTATTATATTGTTTGCCATCAAATACTACCCATGAATTGCAACCGTTAGTTGAATCCGTGAAAAAATCCTACGAACATCATTGGAATGAAGAACTATTAATGTACGCCTATCGTCATCCAGACCGTAAGCTCACGAAAGCAAGAGCTACTGGGCTCCATCCCTACAATCCAAATGCGATTCGTGAGGAGACTTTTGCACCTTCTATCCTCACTCAGCGTCCTGTTCCGCACGAAAAGGCTTCTAACTCAGTTGATCCAGCAGCTCTAGATTTTGGAGAGTTCATGAGCAAGAACACAATTCTGGCAACAGGAGGATTCGGTCGAATGTACTTTTCGACCACCTCAGCTCATACTTGTACAGGAGATGGACCAGCAATGCTGCTCCGACAAGGATACCCTCTGGAAGATTGTGAATTCGTACAATTTCATCCTACCGGCCTGTACCCTGCAGGAGTTCTTATCACCGAGGGAGCTCGAGGAGAAGGTGGTTTTCTTGTTAATTCTAAAGGTGAACGTTTCATGGAGCGTTACGCTCCTAACGCCAAGGACCTTGCTTCCCGAGACGTTGTATCGAGGGCTATTACAATGGAAATCAACGCTGGACGAGGTGTTGGCAAAGAAAAGGATCACATGCACTTACAGCTACATCATTTAGACCTGGAAACATTGACCAAGAAGCTTCCTGGAATTCGAGAAACTGCTGAAACATTTGCTGGAATAGATATCACCCGTGAAAATATTCCAATTATTCCAACTTGCCACTATACCATGGGTGGAATCCCAACGAACTACAAAGGTCAAGTTATATCGGCCGATGAAAATGGTAATGATTGCTGCCTAACTGGTTTGCTTGCATGTGGAGAATGTGCTGCAGCCTCTGTGCACGGGGCTAACCGTTTGGGTGCCGATTCATTGCTAGAGGTTGTTGTTTTCGGAGAAAGATGCGCGAAAACAATTATGGAGCTTAATAAGCCTGGAGAGGAGTACTTGTGTTTGAATGAGGAAGCGGGAGAACAGACAATCGCCAATTTTGATAAAGTTCGATTTGCTGATAAAACAGTTTCTCCCGCTGAATTGCAACTAGAAATGCAAAAAACAATGCAGAAATTTGCTGGAGTATTTCGTACAGAAGAAATTTTACAGGAAGGCTATTGCAAAATTCTCGAGTGCTTTCAAAAGCAAGAGTGTCTAGTGTTAACTGACAGATCGCTTATTTGGAACTCTGAGGCCCATGCTCGGGAAGGTTTCAAGGAAAGGGTCGATGAATACgaGTATAGTAAACCAACATTAACACAACCCAGGAAAGAAATCGATCAACATTGGCAAAAGCATACTTTGGCCTGGTTAGACCGAACGGGAGTAGTTGACATTAAATATCGGCCAGTCATTGACTGTCCAATTTATAAGGAAGTTGAACCAGTTCCACCAGCTGTTCGtgcttattaa
Protein Sequence: METSKRRRGMGWTQEQLKSAIAFVEYRRMSQQKAVVTFGIPRRTLRNHLNSGIEEKRTGRAHTLTHAQEKGLARRIIRLAQVGVPLTRRILYDELDIPRHPERLYNMDEKVCRLILHHQQQVLAQKGIKRVHFIAQEHAGNVMCVNASGNSVPRMILFKGKRLRLEFNDNLPDGTVVRMAPKGSMTTELFIDHHLANYKSPGKCLLVFDGAASYLDARIVDVADEHNIVLYCLPSNTTHELQPLVESVKKSYEHHWNEELLMYAYRHPDRKLTKARATGLHPYNPNAIREETFAPSILTQRPVPHEKASNSVDPAALDFGEFMSKNTILATGGFGRMYFSTTSAHTCTGDGPAMLLRQGYPLEDCEFVQFHPTGLYPAGVLITEGARGEGGFLVNSKGERFMERYAPNAKDLASRDVVSRAITMEINAGRGVGKEKDHMHLQLHHLDLETLTKKLPGIRETAETFAGIDITRENIPIIPTCHYTMGGIPTNYKGQVISADENGNDCCLTGLLACGECAAASVHGANRLGADSLLEVVVFGERCAKTIMELNKPGEEYLCLNEEAGEQTIANFDKVRFADKTVSPAELQLEMQKTMQKFAGVFRTEEILQEGYCKILECFQKQECLVLTDRSLIWNSEAHAREGFKERVDEYEYSKPTLTQPRKEIDQHWQKHTLAWLDRTGVVDIKYRPVIDCPIYKEVEPVPPAVRAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -