Oorn143194.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- clz9
- Assembly
- GCA_963969285.1
- Location
- OZ017742.1:204143679-204145413[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-08 3.3e-05 26.6 0.0 2 40 19 57 18 61 0.87
Sequence Information
- Coding Sequence
- ATGCCGAGAAATCGGATAAAACCTCTTGGAACAAGAAATTACGCCAATTACAAACCAGAAGTGTTAGAGGAGTGTTTAGAGGCTATTAGATCAGGTGACTTAACCCAAAGAGCTGCAGAAAAAAGGTATAATATACCTAGATCTACAATAAAGAACAAACTTAAAGGGACTCATACAAAAAATGTAGACCGTGCAAGAGTCTTTAGTGATGAAGAGGAGCATGTTTTCGaacaacatttaataaaaatgtcagACTATGGGTTCCCTGTAGTTGAAATGGATTTTCGTTATGCAGTCAAAAGCTATTTGGACAAAAAAGGTGTCCACATTTGTCAGTTCAAAAACAATCTCCCTGCCTATGAATGGACAAAAGCCTTCTTAAAAAGACATGAGAATCTGACTCGTAGGATAAGTTCCAATATCAAAAAGGTCAGAGCCGAAGTAGATGCTTCTCTCATCGAAAATTACATTGATAACCTCAAAGAAGAGGTTAAAGATGTTCTCCCAAATAATATATTCAATTACGATGAGACGAACCTTACTGACGACCCTGGGAACAAAAAGGTTATCTGTAAGAGAGGAGCAAAATACGTGGAAAACATTTGCAATTTCAGTAAAAGTGCAACATCAATAATGATGGCTGGAAATGCTGCAGGCGACCTCTTGTCCCCATATATTGTCCATAGAGCTGAGCACTTGCGGTCCACATGGACTGAGAATGGTCCTGAAGGAACTCGATATAATCGCTCTAAAAGTGGGTCGTTTGATGCAGTATGCTTCGAAGATTGGTTTCAGTCAACATTGTTATCGGGTGTTAAAAATCTAGATGGTCCTAAAGTTATCATTGGAGATAACTTATCTTCTCACATCAGTTTGCATGTGCTTAAGCTCTGTGAAGAGAATAATATAAGGTTCGTTTGCCTCCCTCCGAATTCAACACATCTAATACAACCATTAGACGTTGCCTTCTTTGGACCAATGAAAAGATCGTGGCATGACATCCTCCGTAAGTGGAAAGAGTCAGATTCAGGATCAAAACTTGCAACGATCCCTAAAGATTTGTTTCCACGATTGCTAAAAGAGCTAATGGCAAGTCTGGAAGAAAAGCGAAAAGACAATTTGACGGCTGGATTTGCCAAATGTGGAATTCATCCCTTAAACAAGCAAAGAGCTAATGACCGTCTTCCAGAAAACCAGCCCGTGGATAAAGACTCTATAGGAAAAGTTTTTATGGAACAGTTGGAGAAGAAAAGAGCTGAGTTTTTAACTAAAGACGGCCCGAGAAGAACGAAGAAAAAATTGCAAGTGCCTGCTGGCAAGAGTATTGCATTTGAAGAGGTTAAAGCAGCCATCTCAGAAGCAGCAAACAAACTTTCTACCAGTGCGTCAAAGAAAACACAAGTttccaagaagaaaaacaaaaaaaagcaaaactcttCTTCAGATGAAGAAGATGTTGAGATGGTCTTAGAGTCTGATGGGCAAAGCAAAACATTTTCCGATCTGGAAGAAATATTACAGGAAGCAGCAGGCATACCTGTTCACAGGTCCAATGATGAAGAAACACCAGTTTCGTTGAAACCTGAAGACTTTGCCATTGGTAACTTTGTAGTGGTTAAGTATGATGGATCCTGGCAAAATTGTTAG
- Protein Sequence
- MPRNRIKPLGTRNYANYKPEVLEECLEAIRSGDLTQRAAEKRYNIPRSTIKNKLKGTHTKNVDRARVFSDEEEHVFEQHLIKMSDYGFPVVEMDFRYAVKSYLDKKGVHICQFKNNLPAYEWTKAFLKRHENLTRRISSNIKKVRAEVDASLIENYIDNLKEEVKDVLPNNIFNYDETNLTDDPGNKKVICKRGAKYVENICNFSKSATSIMMAGNAAGDLLSPYIVHRAEHLRSTWTENGPEGTRYNRSKSGSFDAVCFEDWFQSTLLSGVKNLDGPKVIIGDNLSSHISLHVLKLCEENNIRFVCLPPNSTHLIQPLDVAFFGPMKRSWHDILRKWKESDSGSKLATIPKDLFPRLLKELMASLEEKRKDNLTAGFAKCGIHPLNKQRANDRLPENQPVDKDSIGKVFMEQLEKKRAEFLTKDGPRRTKKKLQVPAGKSIAFEEVKAAISEAANKLSTSASKKTQVSKKKNKKKQNSSSDEEDVEMVLESDGQSKTFSDLEEILQEAAGIPVHRSNDEETPVSLKPEDFAIGNFVVVKYDGSWQNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165161; iTF_01088171; iTF_01088267; iTF_01088224; iTF_00165158;
- 90% Identity
- iTF_00165161; iTF_01088171;
- 80% Identity
- -