Oorn131836.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- -
- Assembly
- GCA_963969285.1
- Location
- OZ017742.1:54990074-54990385[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 4.2e-07 32.7 0.0 2 37 16 51 15 56 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATCAAAGGAAGACTCTACGGGCTTCTTGGTCTGAGAAGGATTTAAATGAGGCTATGCAAAAAGTGCACAACAAGGAGATAGGAGTAAATGCGGCCGCTAGGATTTACAATATCCCATCAAGGACGCTTAGACGACATTTGTTAACAGGAAAGCTCAAAGTACCACTCGGGAGGCCACCTGTTTTTCCAGAGGAGCATGAGAAAAAGTTGGTAGTTGATTTTAAAAAACTTGAAAAGTTGGCTTTGCACTTGATCGCAAGGATGTTAAGAAATGGCCTACCAGTTAGCTCAAACGCTTAA
- Protein Sequence
- MPRNYQRKTLRASWSEKDLNEAMQKVHNKEIGVNAAARIYNIPSRTLRRHLLTGKLKVPLGRPPVFPEEHEKKLVVDFKKLEKLALHLIARMLRNGLPVSSNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01088040; iTF_01088210; iTF_00205056;
- 90% Identity
- -
- 80% Identity
- -