Oorn079934.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- -
- Assembly
- GCA_963969285.1
- Location
- OZ017740.1:63985314-63987212[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-10 8.9e-08 34.9 0.2 3 41 17 55 15 57 0.91
Sequence Information
- Coding Sequence
- ATGCCAAGAACTAGAAAACGAACGACATCAAAGGGTAGTTGGACGTCGGCTACGTTAGAGGCAGCAATCAAGACTATAAGAAGGGAAGGAATATCAGTCAACGAAGCGGCACTGCAGTATCAAATACCCTACAGCACGCTGAAGAAACGGTACAGGTTATCAATCAGTAATGATATTACCTACAATCGTTCTCCGCTGCTTGGTAGAAAACCTGTGTTCAGTACTGAACAGGAAAAAATACTTGTTGACCATATACTTGATATGTCCAATATATTTTATGGCTTGACGGGTACTCAACTGCGTAAAATATGTTATTGTATGGCCGTGGAGTATGGTGTCGAAGAAAGATTCAATTCggataaaaaaattgctggaaaagaTTGGTTGTACGGGTTCATGAACCGACACCCTGAGCTCAGTGTTAGAAAGCCTGAAGCGACCAGTATCAACAGAATTTTGGGATTTAATAAGACTGAAGTCACTCGTTTTTTTGATAATCTAGAATATGTAATGACTAAATTTAATTTTGAGCCACAAGACATTTTTAATATGGACGAGACAGGATTTTCTACAGTCCACGAGCCAGACAATATTATTGCTCTTAAGGGACAAAAGCGTGTTGGTGCAGCCACTTCCTGGGAGAGGGGCAAAAATGTTACAGCAATTTGTGCTATGAGTGCGACAGGCATTTATGTGCCTCCATTATTCATTTTCCCTCGACAGAGACACTCTCCACAGCTGGAACGTGATGGGCCACCAGGAGCTGTATATACTTGTTCGAAAAATGGGTGGACTAATGAGCAAATATTTTTAACCTGGCTTCAACATTTCGTCAAATTTGCAAAACCtactgcagaaaaacaaattttgctTATTATGGACAATCATAATAGTCATGCTACACTAGAAGCATATGAAATAGCCAAAAATAATTACATAACTATGTTGAGCATCCCTCCACATTCGTCACATCGCTTACAACCTTTAGATGTAACCTTTTTCGGGCCACTTAAGACAGCTTACAGGAGGGAATGCGACATGTacatcaaatcaagaaatatggtTAAAATAACTCCATATGAAATAGCTGGACTATTTAATAAAGCGTGCTCAAAAATAGCATCTTTGGACAAAGGAATATCTGGCTTTAAAAAAACCGGAATATTTCTTATGGACCCATCTGTTTTTTCAGATGAAGATTTTATTGCTCTCTACCAGAATGAACATAATGACAACACAACTTACGAAAGTAACACTGTTGAACTTCCGAAGACAGCTGAAGTTACTTTACAATCAGCGACTTCTACTCAAGGGCCACTGGAATTGTCCACTACCCCTCCACACCACACCAGCAACCAACCTTCACAACAAGATATGCAAAGAAATGATTCTCCACAACCTTCTACAAGTTTTGCTGATATCTTAAATGTTTTAAGTCCTCGCCCACAAGTATTGAAAAAATCAGTAGGGAGCAATAGTAACAAGCAGCACTCAGAAGTTTTGACAAGCACCCCCATGAAGAAAGTTTTTGaggagaagaaaaacaaaaagaataaaaaacaaaataaagaaaatagaccaaagaaaattcaaaacaataaatcTAAGAATACCATattaaagattaataaaaaaccATCTCGTAAAAACGTAAAGAAAGCAACTGCAAACTTGTTCCAAGACAGCACAACTGAGGACTCATCTATAGAAGAAAATAATATATGTGATGATGATTCTGAATACTCTGAGGAGGAAAATAAATGTATGATATGTGACGATGTTGGCAAAAATGAAGAATTATGGTACCGTTGCAGAGGTTGTGGCAAATGGGCCCATTCTGAGTGTTCAGGTTGTGACGACCCTAAATAttatatttgcaatttttgtttAGATCCCTGA
- Protein Sequence
- MPRTRKRTTSKGSWTSATLEAAIKTIRREGISVNEAALQYQIPYSTLKKRYRLSISNDITYNRSPLLGRKPVFSTEQEKILVDHILDMSNIFYGLTGTQLRKICYCMAVEYGVEERFNSDKKIAGKDWLYGFMNRHPELSVRKPEATSINRILGFNKTEVTRFFDNLEYVMTKFNFEPQDIFNMDETGFSTVHEPDNIIALKGQKRVGAATSWERGKNVTAICAMSATGIYVPPLFIFPRQRHSPQLERDGPPGAVYTCSKNGWTNEQIFLTWLQHFVKFAKPTAEKQILLIMDNHNSHATLEAYEIAKNNYITMLSIPPHSSHRLQPLDVTFFGPLKTAYRRECDMYIKSRNMVKITPYEIAGLFNKACSKIASLDKGISGFKKTGIFLMDPSVFSDEDFIALYQNEHNDNTTYESNTVELPKTAEVTLQSATSTQGPLELSTTPPHHTSNQPSQQDMQRNDSPQPSTSFADILNVLSPRPQVLKKSVGSNSNKQHSEVLTSTPMKKVFEEKKNKKNKKQNKENRPKKIQNNKSKNTILKINKKPSRKNVKKATANLFQDSTTEDSSIEENNICDDDSEYSEEENKCMICDDVGKNEELWYRCRGCGKWAHSECSGCDDPKYYICNFCLDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01088024;
- 90% Identity
- iTF_01088024; iTF_01088025; iTF_01088026; iTF_01088027; iTF_01088028; iTF_01088029;
- 80% Identity
- -