Oorn134730.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- -
- Assembly
- GCA_963969285.1
- Location
- OZ017742.1:91686458-91686883[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-12 1.5e-09 40.5 0.0 5 38 19 52 18 57 0.89
Sequence Information
- Coding Sequence
- ATGGTACGTACATACAAGAAAAAAGCTAAAAGAGGAGAGTGGTCAAAAATTTCTATGAAAACAGCTATAGATAAAGTATTAAGTAAAGATATGGGCTACAGAAAAGCCGCTTCTGAATACGGAGTGCCTCAGACTACTTTAGAGCGATATgttaagaaaatgaaagaaggtgGTGAAGTTACGATTAGTGTACCTTTGGGCCCTAAACAACCTATATTTATAACAAAAGAAGAAGACGAAATGGTGGCATATCTAAAACATATGGAAGAACGTCTTTTTGGACTTACAACTCTCGATCTGAGACGTCTAGCATATCAACTGGCTGTGAGAAATAGTAAGGCGCACAATTTCAATACTGACAAGCAGATGGCAGGGGTTGATTGGCTCAAAGGTTTCTTAAGGCGTCATCCAGATTTATCCATTTGA
- Protein Sequence
- MVRTYKKKAKRGEWSKISMKTAIDKVLSKDMGYRKAASEYGVPQTTLERYVKKMKEGGEVTISVPLGPKQPIFITKEEDEMVAYLKHMEERLFGLTTLDLRRLAYQLAVRNSKAHNFNTDKQMAGVDWLKGFLRRHPDLSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087995;
- 90% Identity
- iTF_01087995; iTF_01525861; iTF_00425301; iTF_00425302; iTF_00425303; iTF_00425304; iTF_00425305;
- 80% Identity
- -