Oorn055765.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- -
- Assembly
- GCA_963969285.1
- Location
- OZ017739.1:212857654-212858007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-14 2.1e-11 46.5 0.0 3 41 17 55 16 57 0.96
Sequence Information
- Coding Sequence
- ATGCCAAGTTCATATAAAAGCATATCGCAGCAGCAGACTTGGAACCTGGATGCGATGGAAAAAGCTATTAAAGCTGTCAGGAGTAACGAAATGGGGTTTTTAAAGGCAAGCAAAGAGTTCAACGTTCCTCGTTCGACGCTCAAACGACGCGTTCAAGGAAAAAACAAAGAAGccgttgaaaatatgaaaatattggGGTCTTATCGTCCAATTTTTAGTCAAGAGCAGGAAGAAGAATTGGTGCAACATATTTTGGATATTGAGAATCGTTTTTATGGACTAACATTGCAGGATATTAGAAGACTAGCCTATCAACTGGCTGAACAAAATAACATAAACCACAAGTTCAGCTAG
- Protein Sequence
- MPSSYKSISQQQTWNLDAMEKAIKAVRSNEMGFLKASKEFNVPRSTLKRRVQGKNKEAVENMKILGSYRPIFSQEQEEELVQHILDIENRFYGLTLQDIRRLAYQLAEQNNINHKFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087957;
- 90% Identity
- iTF_01088051; iTF_01087937; iTF_01087936; iTF_01087938; iTF_01087957;
- 80% Identity
- -