Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:421598902-421608650[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.7e-05 0.014 18.2 0.0 8 37 90 119 83 121 0.77

2 4 3.7e-05 0.014 18.2 0.0 8 37 236 265 229 267 0.77

3 4 3.7e-05 0.014 18.2 0.0 8 37 432 461 425 463 0.77

4 4 3.7e-05 0.014 18.2 0.0 8 37 578 607 571 609 0.77

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.7e-05	0.014	18.2	8	37	90	119	83	121	0.77
2	4	3.7e-05	0.014	18.2	8	37	236	265	229	267	0.77
3	4	3.7e-05	0.014	18.2	8	37	432	461	425	463	0.77
4	4	3.7e-05	0.014	18.2	8	37	578	607	571	609	0.77

Sequence Information

Coding Sequence: ATGGCCTTTGTCGAAGAAGTAATTGATTTACCAATATCAGAAGATGAATTCAGAGAATACCTCTTGTGCAATACAGATGTTGAGTGCTATGGAGAAATGACACATGAAGAAATACTGGCAGAAGCGACGGAATGCAACACCGTAGCAGAAAGCgataatgaagatgatgaatcTGCCGAAATTGAAAATATGAGTACTATTCCTTCaACTTCTCGCTTCAAAAGAAAAACAGACAGAGGCAACTTTGATCTAAAAGATGCCGTTCAGGCGGTTAAAGCAGTGAAGTTGGACAACAAAGCCGTGAGAGCTGCTGCAGTGCAATACAATGTGCCTAAATCTACTTTATGGCGATATGTAGACATTGTGTCGAAGAAACACGAAGAAATTTCTACTGTGTCTGACGAGCAATTGCTAGAAACGATTCAACATGTTGGTACATACGCTGCATGTGTCACGAATCAAgtgttTACGGCCCAACAAGAGAAAGCGCTCGTCAACTACATCAAGCAATGCAGCGACTACTATTATGGTCTTAATGTCACTGAGTTGAGACAGCTGGCATATCAATTTGCCATAAAAAGCCAAATAAAATATCCTGAAATCTGGAATGTCGACAAAATGGCAGGCCGTGATTGGTATTACGGaACTTCTCGCTTCAAAAGAAAAACAGACAGAGGCAACTTTGATCTAAAAGATGCCGTTCAGGCGGTTAAAGCAGTGAAGTTGGACAACAAAGCCGTGAGAGCTGCTGCAGTGCAATACAATGTGCCTAAATCTACTTTATGGCGATATGTAGACATTGTGTCGAAGAAACACGAAGAAATTTCTACTGTGTCTGACGAGCAATTGCTAGAAACGATTCAACATGTTGGTACATACGCTGCATGTGTCACGAATCAAgtgttTACGGCCCAACAAGAGAAAGCGCTCGTCAACTACATCAAGCAATGCAGCGACTACTATTATGGTCTTAATGTCACTGAGTTGAGACAGCTGGCATATCAATTTGCCATAAAAAGCCAAATAAAATATCCTGAAATCTGGAATGTCGACAAAATGGCAGGCCGTGATTGGTATTACGGGTTCATGAGGAGGGAaggtagtcagggttgggacactCCTATATATCGAGCAAGACACTCCGCGCCAACTATGTCAAAGCGTGGTATTACTTCTGTTGGTAACGTTAAACTTTTCCGTGTATCGCTCGTGTCAAAGATTGCTTGGTTAAAaACTTCTCGCTTCAAAAGAAAAACAGACAGAGGCAACTTTGATCTAAAAGATGCCGTTCAGGCGGTTAAAGCAGTGAAGTTGGACAACAAAGCCGTGAGAGCTGCTGCAGTGCAATACAATGTGCCTAAATCTACTTTATGGCGATATGTAGACATTGTGTCGAAGAAACACGAAGAAATTTCTACTGTGTCTGACGAGCAATTGCTAGAAACGATTCAACATGTTGGTACATACGCTGCATGTGTCACGAATCAAgtgttTACGGCCCAACAAGAGAAAGCGCTCGTCAACTACATCAAGCAATGCAGCGACTACTATTATGGTCTTAATGTCACTGAGTTGAGACAGCTGGCATATCAATTTGCCATAAAAAGCCAAATAAAATATCCTGAAATCTGGAATGTCGACAAAATGGCAGGCCGTGATTGGTATTACGGaACTTCTCGCTTCAAAAGAAAAACAGACAGAGGCAACTTTGATCTAAAAGATGCCGTTCAGGCGGTTAAAGCAGTGAAGTTGGACAACAAAGCCGTGAGAGCTGCTGCAGTGCAATACAATGTGCCTAAATCTACTTTATGGCGATATGTAGACATTGTGTCGAAGAAACACGAAGAAATTTCTACTGTGTCTGACGAGCAATTGCTAGAAACGATTCAACATGTTGGTACATACGCTGCATGTGTCACGAATCAAgtgttTACGGCCCAACAAGAGAAAGCGCTCGTCAACTACATCAAGCAATGCAGCGACTACTATTATGGTCTTAATGTCACTGAGTTGAGACAGCTGGCATATCAATTTGCCATAAAAAGCCAAATAAAATATCCTGAAATCTGGAATGTCGACAAAATGGCAGGCCGTGATTGGTATTACGGGTTCATGAGGCGCCAAAAGGAACTTACTCTGCGCACTCCCGAGCAAACGTCCCTGCATCGTGTTAAATCGTTTTCGAAAGAaaacgtacagtatttttttattaatctCGACGCAGTACTGACAGAGCATCCATATCAGGCGGCAGACATCTggaacatggacgaaacaggATTTTCGACAGTGCCAACCAAGATTGGAAAAGTGATTTCCGTGCGAGGCTCCAGAAGAGTGGGGCAAATCTCGTCTCAAGAACGAGGATATATGGTGACGATGGCTCTAGCAGTGAATGCTGAAGGAAATTCAATACCACCGTTCTTCTTATTCGCTAGAAAGAATATGCAATCTTCATTCATGGAGAATTCATCACCTGGGGCAGTTGGGTTTGCAAACGGGTCTGGGTGGATGCAGCAAACAGAGTTTGTGGAGTACATCAAGTTTTTCATTGATAAGACAAAAGTCTCAAAGCAAACACCTAAATTGTTGCTGTTAGATAATCACACGTCGCATCTCTCCGTCGAGGCATTAGATATCGCTGCTGAAAATGGCGTCACTATGCTCACATTTCCCCCTCACTGCAGTCATCGCCTACAACCCTTAGACGTCTCAGTGTTTGGTCCCGTTAAAGCCTATTACAAATCCCAATGTAATGCATGGCAGAAGAATCACGCCGGCAAAGCCCTGGAAATTAGACACATTCCAGAACTAGTCCGATCTACCTTGGACTTGGCGCTTACTCCTCGGAATATAAAAGCCGGGTTTCTTGCCACTGGTATTTGTCCGTACAACTCCGATATTTTCGCTGATTCCGACTTCGTTCAAGCTGTGTTTAGTGGGGAAAACGAGCGAGCTGTTCAGGAGAACGAAGAAACTGAAGGAGATTTACAGCGCCGTATAATAGTTTCGGATACTCTTGAGGTTGGTGCGGACAAGGAAGCAGCGAGTTCTGTTGGCACGCACGCGAAAGTAGCGAGTTCTGAGCCTTTGACTTCTACGTCATGTGAGtctgacctttccaaaattttgtcATCGATTGGGCCTGTGCAAGCGGCCACGCCAGTAAAAACATCTAATCGTGGACGGCGCGCAATGAAAAGTGCCATTTTAACATCATCAGACAACCGTCAGCAATTGCGAGAAAAACAAGCAAAGCGTGATGCTTCTAAAACACCGGAAAAAGGCTCAGTATCTAACACTACAAAATCGAACCCAAAAACACCAGCAAAACGAGGTCGCCCACCAAAGAAAGCACGAAAACAACTTTCTTCAGACGAAAATGATGACGAAGACTTTTGCATCATTTGCTTGGAAACGATGCCACGGGTTTTGAATCGCAACAACTCCATTGCCTGCAGCGAGTGCAAAAGAGAAGTTCATCTGAAGTGCGCCAACCTTACTAAGAGTTACTTCATTTGCCAAAATTGTGAATCTGACTAA
Protein Sequence: MAFVEEVIDLPISEDEFREYLLCNTDVECYGEMTHEEILAEATECNTVAESDNEDDESAEIENMSTIPSTSRFKRKTDRGNFDLKDAVQAVKAVKLDNKAVRAAAVQYNVPKSTLWRYVDIVSKKHEEISTVSDEQLLETIQHVGTYAACVTNQVFTAQQEKALVNYIKQCSDYYYGLNVTELRQLAYQFAIKSQIKYPEIWNVDKMAGRDWYYGTSRFKRKTDRGNFDLKDAVQAVKAVKLDNKAVRAAAVQYNVPKSTLWRYVDIVSKKHEEISTVSDEQLLETIQHVGTYAACVTNQVFTAQQEKALVNYIKQCSDYYYGLNVTELRQLAYQFAIKSQIKYPEIWNVDKMAGRDWYYGFMRREGSQGWDTPIYRARHSAPTMSKRGITSVGNVKLFRVSLVSKIAWLKTSRFKRKTDRGNFDLKDAVQAVKAVKLDNKAVRAAAVQYNVPKSTLWRYVDIVSKKHEEISTVSDEQLLETIQHVGTYAACVTNQVFTAQQEKALVNYIKQCSDYYYGLNVTELRQLAYQFAIKSQIKYPEIWNVDKMAGRDWYYGTSRFKRKTDRGNFDLKDAVQAVKAVKLDNKAVRAAAVQYNVPKSTLWRYVDIVSKKHEEISTVSDEQLLETIQHVGTYAACVTNQVFTAQQEKALVNYIKQCSDYYYGLNVTELRQLAYQFAIKSQIKYPEIWNVDKMAGRDWYYGFMRRQKELTLRTPEQTSLHRVKSFSKENVQYFFINLDAVLTEHPYQAADIWNMDETGFSTVPTKIGKVISVRGSRRVGQISSQERGYMVTMALAVNAEGNSIPPFFLFARKNMQSSFMENSSPGAVGFANGSGWMQQTEFVEYIKFFIDKTKVSKQTPKLLLLDNHTSHLSVEALDIAAENGVTMLTFPPHCSHRLQPLDVSVFGPVKAYYKSQCNAWQKNHAGKALEIRHIPELVRSTLDLALTPRNIKAGFLATGICPYNSDIFADSDFVQAVFSGENERAVQENEETEGDLQRRIIVSDTLEVGADKEAASSVGTHAKVASSEPLTSTSCESDLSKILSSIGPVQAATPVKTSNRGRRAMKSAILTSSDNRQQLREKQAKRDASKTPEKGSVSNTTKSNPKTPAKRGRPPKKARKQLSSDENDDEDFCIICLETMPRVLNRNNSIACSECKREVHLKCANLTKSYFICQNCESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -