Obru001935.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- stc
- Assembly
- GCA_010583005.1
- Location
- NW:827529-839603[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.1e+04 -4.3 1.6 15 19 531 535 530 535 0.81 2 14 0.13 7.5e+02 -0.3 0.3 4 10 564 570 563 571 0.94 3 14 4.3e-06 0.025 14.0 12.1 4 18 581 595 579 596 0.94 4 14 1.3e-06 0.0074 15.7 14.8 1 18 632 649 632 650 0.97 5 14 3.5e-06 0.02 14.3 11.7 1 19 688 706 688 706 0.98 6 14 1 5.9e+03 -3.2 0.7 5 10 735 740 735 740 0.94 7 14 4.2e-06 0.024 14.0 13.0 4 18 753 767 746 768 0.86 8 14 2 1.1e+04 -4.6 1.6 5 10 797 802 797 802 0.90 9 14 0.0089 51 3.4 11.3 1 11 808 818 808 830 0.88 10 14 7.9e-10 4.5e-06 25.9 10.4 1 19 835 853 835 853 0.98 11 14 1.4 7.9e+03 -3.6 0.5 6 10 882 886 881 886 0.86 12 14 2 1.1e+04 -6.9 10.1 10 19 900 910 892 910 0.70 13 14 1.1e-06 0.006 16.0 10.4 1 16 946 961 946 971 0.90 14 14 1.9e-05 0.11 11.9 11.5 1 18 978 996 978 997 0.90
Sequence Information
- Coding Sequence
- ATGGCCACTTGGGACGGTTCGTACCCAGCGGAGGAGGAATCCAACTATTTCGTTTATTCCGGCCAGAACGCGCCCGGCACCGCCGTAGAGTCTTGGCCGTATTTCACCGGCAACTCGACCGGGAACCCCGCGTACCTGCCCGACATTGCCTCAGGGAACTATTTTCCCCCTGCGAGTGGCGGTCAGCATATGTACGAGCAGAACAGGTCTACCTCCGACTCCGGCTTCTATACGAACATTCTGCCGATACCGTCGAACATGGTGCCTTTGGGAAATTCCTATCAGGAACATATACTGCCAAACACTTCCCCAGTGGACGGCGTACCGAACAGTTTGCAGCACTCCGCGAAGGGTGCTCGATTCTTACGCAATGCATCGTCCTCCCGCGACAGTTACAATCGGAGACCTAGGAGTAACCGGATGACCGGTAATTACGCGTCGGAAGGGGATATTCAGTCCAGCATAGTGGTGAACTCGAATCTACACCCCACAGCCAGTGAATTTGTGCCAAATTGCGATGCAAAATTTAGGAAGGACAAGTTTAACAAGAGTGACACTTTTAACAATGCAGGTGGAAGTAACTTCAGTGTGCAGGGTTGTAGGCCAAAATCAGTCGAGGTGTCTTTGCCAGATAACAGATATAACAAGGGTGAAAGACGCTATGACAATAAGAGGAATATGTATTATAAGCAAAGGAGCCCAGAGGATGCACCGTCTATAAGATCCGATTATAAGGATGCCTATAGAACGTATGGTGCAAAGAGTTACAACAAGTTTCAGAAtgacaaatattataaaaaaaatattaaaagacgTCAAACTGACGTGTCATCCGGCATGGAACAGCACGTTGTCAAAAAACCTATCGCAACTGACTCTACCAGCTCGTCCATGTCCAGCAGTCTGGTGGATAAGATCTCGGTTGAAGGGATTCTGGAGGACGACTTCTTGAACATTAACGCGACTAAGGAGGAGACGCTATCACACGAAAACAATGACTCGGAAAGCACGTCGTCGAGAAGCGACATGCAACGGAACGACAAATCCAAGCGATTCAGCAACCACGCCAATACCTTCAACTATCACAAATACAATCCGGACAGGCCCGAACTCGTTGGTAGAATTACGAGAAGATACACGGGTAACAGCAGAAGCGAAAGATACGAGAGCAATTacaaaggaaaaaagaatagCTTCAATAACCAGGCTGGTTCTAGAGGTAACGGTTACGGCAAGAGAAGTGGAAATGAGAAATTGGACGATAGAGACAATAAAGACGGTAACAATGAGGAGATGACGAATCACAAGGAGAAGAAAGTGGAGAATTGGAGGGATAGAACAGAAAGTAACGGGACAACGGCGCATACGCAGAGGAGAAATCTGCAAAAGAAATACGAGATCGATGACGACgcgagtcagagagagagattgaCGGAACAGCTGAACAGAGGAGCACTGGAATGTCTCGTTTGTTACGAGCATATCAAGCAAAGCGACTATGTGTGGTCCTGCGCTAACTGTTATCACGTCTTACATCTGAAATGTATCAAAAAATGGGCCAAGTCGTCGCAGATCGATAAAGGTTGGAGATGCCCGGCTTGCCAAAACGTCAGTTCCGTCGTACCGATGGATTACTATTGCTTCTGCGGGAAAATGAAGATGCCGGAATGGAATCGTCGGGACGTGGCGCATTCGTGCGGCGAAACCTGCGGTCGTAATCTATCGAAGAAGAGCTGCGTGCACAAATGCACTCTGCTCTGCCATCCCGGCTCTTGCCCGCAGTGTGTATCGATGGTGACCAAGTATTGCGGTTGCGGCAGAACCTCGCAGACGCTCCAATGTAGCGCTCACAAACCGCTACTCTGCGACTCAATATGCGGCAAAGATCTACCGTGTGGCAAGCACGTCTGCGAGAGACAATGCCACCAAGGGGAGTGCGGCACTTGCGACAAGACTGTGCAGCAAACATGTTTCTGTGGCAAGAAGACTCAGGAAGTGCCTTGCCGAGCCAATGTTCCGGATACGTATTCCTGTGATAATATCTGTAACAAAAAGCTCGACTGCGGTAAACACAACTGTCGGAAGATCTGTCATCCGGATTCTTGCGAGTCTTGTTCCTTGACGCCCGATAGAGTTACAACCTGTTGTTGCGGTCAGACGCCATTaacggagaagagagagagttgtCTAGACCCCGTGCCGACTTGCGACAAGATCTGCTCGAAGCGTCTTAAGTGTGGCCAGCCGAGTAATCCGCACACCTGCAAGGCATCGTGTCACACGGGCGAATGCCCAGAATGCGACTTGAGCAGTGATGTCAAGTGTCGATGCGGTAACATGGACCGGGAGATCGCTTGCCGAGATTTGACGAGCAAGGCCGATGACGCACGTTGCGAGAAGCGCTGCAAGAAGAAGAGATCTTGCGGCAAGCACAACTGCAATCAGCTATGTTGCATCGATATCGAGCATATCTGTCCTTTACCGTGCTCGAAGACTCTGAGCTGCGGTCGACACAAGTGTGAACAGAGATGTCACATGGGAAGATGCATGCCTTGTTGGCAAAGCAGCTTCGACGAGCTATATTGCGAGTGTGGTGCTGAGGTGATCTATCCGCCGGTTCCGTGCGGCACAAGGAGACCCGCCTGCAACCGGCCATGCTCTCGTCAGCATGCCTGCGGTCACGAAGTGCTGCACAACTGCCACAGCGAGCCTACGTGCCCGCCGTGCAGCGTACTAACTCAGAGATGGTGTCATGGCAAGCATGAGCTGAGGAAGGCAGTAGCGTGCCACGTGAGCGAGATCTCGTGCGGTCTGCCGTGTAATAAACCGTTGTCGTGCGGCCGGCACAAATGCATTACAATGTGCCACTCTGGGTCCTGCGAGAAACCCGGTCAGCAGTGTATACAACCTTGTGTCATCACGCGAGAATTATGCGGGCATATTTGCGCTGCTCCGTGTCACGATGGCAAGTGCCCGGATACGGCCTGTAAAGAGATGGTTAAAGTGACATGCCAGTGTGGACATAGAACCATGAGCCGTACTTGTGTCGACAATGCGCGGGAGTATCAGAGAATAGCTAGCAACATATTGGCCAGTAAGATGGCCGACATGCAGCTTGGTCATTCCGTCAATCTAGAGGAAGTCTTCGGACAAGGCGCGAAGAAGCAGAATCAGTTGAAGACTTTGGAATGTAACGATGAGTGCAAAACGATTGAGCGAAATCGAAGATTAGCTTTGGGACTTCAGATCGTCAATCCGGACTTGAGCGGCAAGCTGATGCCGAGATACAGTGATTATATGAAACAGTGGGCCAAGAAGGACCCGCATTTCTGCCAGATAGTCCACGAAAAGCTCACGGAATTGGTGCAGCTTGCGAAAACGTCGAAGCATAAGTCCCGGAGTTATTCGTTCGACAGCATGAACAGAGACAAGCGCCACTTTGTGCACGAGTCATGCGACCACTTCGGCTGCGAGAGTCAGGCGTACGATGAGGAGCCGAAGAGAAACGTAGTCGCGACTGCCGTAAAAGATAAGTGTTGGCTACCAAGTTATAGTTTATTGGAGATAGTGCAGAGGGAGAATGGGCAGAGGAAAGTTCCAGGACCGGTACTTAATACTTCTAGGGGAAACAGCTCTACAAAGACTGTCCTACCGGTGAAGAGTCCACAGTTGTCAACTTCTAAAATCCCTGATAAAGAAATAGACTATTTTGATTATCGAGGATAA
- Protein Sequence
- MATWDGSYPAEEESNYFVYSGQNAPGTAVESWPYFTGNSTGNPAYLPDIASGNYFPPASGGQHMYEQNRSTSDSGFYTNILPIPSNMVPLGNSYQEHILPNTSPVDGVPNSLQHSAKGARFLRNASSSRDSYNRRPRSNRMTGNYASEGDIQSSIVVNSNLHPTASEFVPNCDAKFRKDKFNKSDTFNNAGGSNFSVQGCRPKSVEVSLPDNRYNKGERRYDNKRNMYYKQRSPEDAPSIRSDYKDAYRTYGAKSYNKFQNDKYYKKNIKRRQTDVSSGMEQHVVKKPIATDSTSSSMSSSLVDKISVEGILEDDFLNINATKEETLSHENNDSESTSSRSDMQRNDKSKRFSNHANTFNYHKYNPDRPELVGRITRRYTGNSRSERYESNYKGKKNSFNNQAGSRGNGYGKRSGNEKLDDRDNKDGNNEEMTNHKEKKVENWRDRTESNGTTAHTQRRNLQKKYEIDDDASQRERLTEQLNRGALECLVCYEHIKQSDYVWSCANCYHVLHLKCIKKWAKSSQIDKGWRCPACQNVSSVVPMDYYCFCGKMKMPEWNRRDVAHSCGETCGRNLSKKSCVHKCTLLCHPGSCPQCVSMVTKYCGCGRTSQTLQCSAHKPLLCDSICGKDLPCGKHVCERQCHQGECGTCDKTVQQTCFCGKKTQEVPCRANVPDTYSCDNICNKKLDCGKHNCRKICHPDSCESCSLTPDRVTTCCCGQTPLTEKRESCLDPVPTCDKICSKRLKCGQPSNPHTCKASCHTGECPECDLSSDVKCRCGNMDREIACRDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCEQRCHMGRCMPCWQSSFDELYCECGAEVIYPPVPCGTRRPACNRPCSRQHACGHEVLHNCHSEPTCPPCSVLTQRWCHGKHELRKAVACHVSEISCGLPCNKPLSCGRHKCITMCHSGSCEKPGQQCIQPCVITRELCGHICAAPCHDGKCPDTACKEMVKVTCQCGHRTMSRTCVDNAREYQRIASNILASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPHFCQIVHEKLTELVQLAKTSKHKSRSYSFDSMNRDKRHFVHESCDHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPVLNTSRGNSSTKTVLPVKSPQLSTSKIPDKEIDYFDYRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770051; iTF_00452919;
- 90% Identity
- -
- 80% Identity
- -