Obru001721.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- pnr
- Assembly
- GCA_010583005.1
- Location
- NW:244743-259563[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.48 9.1e+02 -1.1 0.2 2 13 232 248 232 255 0.75 2 2 9e-17 1.7e-13 49.3 4.3 1 34 423 455 423 457 0.98
Sequence Information
- Coding Sequence
- ATGCTCGAGGTACCGCCGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAGTTGTCCATattcgaggaggaggagggctcCCAGCGAGACTTCGCCGCCAAGATACTGACATGTCTGTCGCTTACGgtgAAGGATGGTGATTCCTTACCAACATTTATCTGCCATCGGTGTGTATATAAGTTGGATGCGCTGTGTAACTTTCGTGAGGTGTCGCACAAGTCTGACATTATACTCAAACAGTACCTGGATTATGCCAAGCAACTGTCGTCTCACGACGAGCAGAAAAAGTCTTTCTCCACTGCCAAAGTAGCGGGCGCGAGCCCTCTGCAATCGTTCCTCCAATTGAGCAAGATACTGTTCAATGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACACAAACGCATCATCTGGAATTGCATAACGACGACATGCCAGAGTTTTACAATGTTAAGTGCGAGCCAGGGGACGACACCTGCTCCAACAGTTCAGATTCCGACCGATTGGAGATAGAGGATCGTGACGAGCAGGAGATCGAGAGCGAAGAAAATGGTTACGACACGATGGACACCAAAAGAATTAAGATGGAGAGTAATCACGATGACTCCGAGCCTAACACAGCTAATTGTAGCCCGGTTAATAGGATGGACACTCCGGAAAGCAATTGCTCTGACACCAACATTGATCAGGAAACGACCAAGTTATGGCAAGCCCTAGCTAACAATAGAAGCTTGGAAATCACTCGAACGAACGGCGATAAGCTGAACAATGGATTTACCGGCGAAGCGACCAATCTGCTGCGCACTTTGATCAACAATAGGCAGATCGGTATTACCACCGTTGATTCGGACAAGTTATCTCCGCAAGTCAGATTTTACAGGGAGGTCCAAGGGACTACCATGGAGCGTACCGTATCCGATTGCCCCGTACTCGGTAATCGTACCAATGTAGCAGCTTTAGAAAATAAGAGTGCCTCGATAGACAGTAATCCGTCTAGCCCTGCCAGCATCAGCCGTAAggaggcgacgacgacgaaaggTCGCAGGAAACAGAGTTACCCAAGCAAGGCCCCGGCGAGTCCAGACGTCGTCACCGCGTATCAGCACGAACACAACGAAGAACAAGCGCAGGATTTCACTACCTGGCCCAACAAGATAAAGAATAAGATGGACGAACAAAAACAACAGCTTGACCAGCAAAGTAGTAACGTTGCGAAGAAGGTGGAGATGTCCTGTTCGAATTGCGGAACTATGACGACGACTATCTGGAGAAGAAATATGAAGGGCGAGATGGTGTGCAATGCTTGCGGGCTGTATTACAAGCTACACGGCATTAATCGTCCGGTTACCATGCGGAGGGATACTATACATACGCGCAGGCGTAGACCGAAGGGCGAGAAACCGACGAGGCACAGAAAAAAAGGAAACACGATCTTAGCGCCTCAAGCAGCGGAACAAATGGATCGCGATGATAGCATGATGGAGGCTCTTCGACGACAAATTCAGCCCCACCTGATGATGGCGTTGACGCCCCCGCATATAGCCGCTGGCCACCCGCCCCCACCTGCCGCTCAAATCAGTTATACATTACCTTTGTCTACTTACATGATTCATCAGCATGTGAAAGCCGAGGGTACGCGTGTGCAACGGCACTTGTCCGTGGACACTGAGGAAGCCGACGAAGGTGATGAGGAGAACGTTTCCGATGTTCCCCTGAATTTGGTGGCGACTTCGCTCTCGGATCAGGCGCACTGA
- Protein Sequence
- MLEVPPKFYELCRLCLSSDGVKLSIFEEEEGSQRDFAAKILTCLSLTVKDGDSLPTFICHRCVYKLDALCNFREVSHKSDIILKQYLDYAKQLSSHDEQKKSFSTAKVAGASPLQSFLQLSKILFNEEPNSEPASINQNIIPQTQTHHLELHNDDMPEFYNVKCEPGDDTCSNSSDSDRLEIEDRDEQEIESEENGYDTMDTKRIKMESNHDDSEPNTANCSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRTLINNRQIGITTVDSDKLSPQVRFYREVQGTTMERTVSDCPVLGNRTNVAALENKSASIDSNPSSPASISRKEATTTKGRRKQSYPSKAPASPDVVTAYQHEHNEEQAQDFTTWPNKIKNKMDEQKQQLDQQSSNVAKKVEMSCSNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGINRPVTMRRDTIHTRRRRPKGEKPTRHRKKGNTILAPQAAEQMDRDDSMMEALRRQIQPHLMMALTPPHIAAGHPPPPAAQISYTLPLSTYMIHQHVKAEGTRVQRHLSVDTEEADEGDEENVSDVPLNLVATSLSDQAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770042;
- 90% Identity
- iTF_00770042;
- 80% Identity
- -