Obru005228.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- grn
- Assembly
- GCA_010583005.1
- Location
- NW:221426-355336[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8 5.3e+03 -3.5 0.1 7 18 7 18 6 20 0.78 2 3 2.2e-19 4.2e-16 57.6 4.7 1 35 500 533 500 534 0.98 3 3 7.8e-18 1.5e-14 52.7 5.6 1 35 557 590 557 591 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCACCGCTCGGTGGTACGAGCCGCCTAGGTCGTCGCTGGAGCCGCCTTCGGGGGGTGCCGGGGTAGCCGGGGTGGTCGGCAACCCCAGCGACTACAGGGGTTACTACCCCCACGCCGGACCGACGGCGCACCACCCCGCGGCCGCACACTACGCCCACACGAGGATGTCGAGCAGCGGCGTATCGAGCGGGCCGGTGAGTCAAGTCTGCCGGCCGCACTTTCACGGCTCTGTGCTCCACCCGTGGCTGTCCAGCAGTAGCGCGGACACCTCCAAGACACCCTGGGGATTCCCGGCGACCACGACGACCACGGGTGGCGGCGTGAGCGACGAGAAGCCGCAGAGCCCGCTGGGGTCGTCGTTGCCGGCGACCACCGGCAGCCTATCGAGCCACGGTAGCGCAGGACACCACACACTCTTCTCCTTTCCGCCGACACCGCCCAAGGACGCTACGCCCGACAGTATAACCGCCAGCACGACCTCCAGCacaaacaacaacaacaactcGACGAGCgccaacaacaacaacaacagcggCAACCCCTTGTCCGGTCTGGGCGGCGGTGCCAGCGAGTACCAAGCGGCGGTGGCGCACGTGGCGGCAATGGGCGCCTTCATGCACCACCAGGACGCACTGGGCGCGTCCGGTGCCGGTTCCTGCGACATCAAGCCGACAGTGATGCTCGGCCACCATCACGGGGCACCCTCGCCGCCACACCAGCAGCACAACGGCACCAACAACGGCAGCAACGGCCCCACCGGCACCAACGGCTCGTCCGGCCAGGTGAAGCAGCGAGAAGGTAATAACCAGTCCGGCAATGTCACGGCCGGCAGCCAACAGGCGAGCGCCacgcaacagcagcagcaacaacagcagcaggaCGCGTATCAGAGCAACAACGGCGTGCCTgccggcggcggtggtggcggcggcggcggtggcggcggtggcggtggtagcGGAGGCGGTGGCactggtggcggcggcggtggtggtggcggcgcggTGTCACCCTGCAGAGAGAGCTACGCGGCCGTGGCTGCAGCCGCGGCAGCAGCCGCGGCGTCCAACAGCCACCATGCCACTTCCGGCTCGCAGTACGACCCGGCCGCGTCCGCGTACAACATGTACCAGCACCTGCAGTATCCCACCGCCAcccaccatcaccatcatcatcatcatcacggTGTCGCCGCCgcgtcgtcctcctcgtcgtcgtccgccGCCGCAGCAGCGGCCGCCGCCGCGTCGTCCCACAATCCGCACAACGGCAGTGCGGTCGCCGGTATTTTCGGTCACCACGCCGCCGGTGCCGCCGGTAACGCGACCGGCGTAACCGGCGTCGGAGGCGCCGACACGAAGCTGTTAGTCGGTCACGCGGCCGCGCACGGGAACACGCCGGGCTCGCCGTccgcgcagcagcagcagcagcaaaaGCCGAGGAACAAGTCGAGGACGTCCGCCGAGGGTCGCGAGTGCGTCAACTGCGGCGCCACCTCGACACCCCTCTGGAGACGGGACGGCACCGGCCATTACCTCTGCAACGCCTGCGGCCTTTACTACAAGATGAACGGCCAGAATCGACCTCTCATCAAGCCGAAACGACGCCTTTCGCTGCAGAGTGCGGCGAGGCGGGCGGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACCCTCTGGCGGAGGAACCAGGCCGGCGAGCCGGTCTGCAACGCTTGCGGGCTTTACTACAAGTTGCACAACGTGAACCGGCCGCTGACGATGAAGAAGGAGGGCATTCAGACGAGAAACAGGAAGCTCTCGTCAAagagcaagaagaagaagaacggcGGCTGCCTAGGCCTGGGTGTCATGGGAGACATGATCAAGGCCAGTGGACATCTCGATCTCGATAACAAATCCTTCCACTCCGGCTTCGGAGCGCCGATGGGTACGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAAGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCACATTCGCATTCCCATTCTCATCACATGCCGAGCCTTCAGGGTCTGCAGCTGACGACGAACGCAATGAGCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSTARWYEPPRSSLEPPSGGAGVAGVVGNPSDYRGYYPHAGPTAHHPAAAHYAHTRMSSSGVSSGPVSQVCRPHFHGSVLHPWLSSSSADTSKTPWGFPATTTTTGGGVSDEKPQSPLGSSLPATTGSLSSHGSAGHHTLFSFPPTPPKDATPDSITASTTSSTNNNNNSTSANNNNNSGNPLSGLGGGASEYQAAVAHVAAMGAFMHHQDALGASGAGSCDIKPTVMLGHHHGAPSPPHQQHNGTNNGSNGPTGTNGSSGQVKQREGNNQSGNVTAGSQQASATQQQQQQQQQDAYQSNNGVPAGGGGGGGGGGGGGGGSGGGGTGGGGGGGGGAVSPCRESYAAVAAAAAAAAASNSHHATSGSQYDPAASAYNMYQHLQYPTATHHHHHHHHHGVAAASSSSSSSAAAAAAAAASSHNPHNGSAVAGIFGHHAAGAAGNATGVTGVGGADTKLLVGHAAAHGNTPGSPSAQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKNGGCLGLGVMGDMIKASGHLDLDNKSFHSGFGAPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMPSLQGLQLTTNAMSGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00230987;
- 90% Identity
- iTF_00770040;
- 80% Identity
- -