Obru001736.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- HIVEP1_1
- Assembly
- GCA_010583005.1
- Location
- NW:548867-572773[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 3.2e-05 0.002 17.8 0.4 1 23 105 127 105 127 0.98 2 9 0.017 1.1 9.3 2.1 1 21 133 153 133 157 0.86 3 9 0.0069 0.44 10.5 0.5 3 21 388 406 386 407 0.94 4 9 1.4e-06 9.2e-05 22.1 2.4 1 23 1134 1156 1134 1156 0.99 5 9 0.00011 0.0073 16.1 4.6 1 23 1162 1186 1162 1186 0.91 6 9 1.7e-06 0.00011 21.8 0.1 2 23 1870 1891 1869 1891 0.97 7 9 0.00066 0.043 13.7 1.8 1 23 1897 1921 1897 1921 0.92 8 9 0.0011 0.073 12.9 3.3 1 23 1942 1966 1942 1966 0.93 9 9 0.15 9.3 6.3 0.9 1 19 2127 2145 2127 2150 0.94
Sequence Information
- Coding Sequence
- ATGACGACAGAGACCCACACTGTGGCGATGACAGACCCACAGCTgaccaacaacaacaataacaacaacaataataacaacaataacaacgatGGCGAGCCAAAGTACCTGCACAAGAAATTCAAGAAAATGGCGACGACCGAGGTCGCGTCAAAAGCCGAACCCAAGAAGGAGACTACGGCAAATAACGCGACTGTCGAGACGCCGAAGCGAAAGGATGCCGACAAGGATAACAAGGAGACGAAGGAGCCCGCCAAACTCGAGGCTTCCCCGGAACCTGAGGGAGAACCCACCGAGACCCGCAAGAGCGGCTACGTTTGTCCATACTGCAACTTATCCTGCGCGAAACCGAGCGTGCTTCAAAAGCACATCAGAGCGCACACGAACGAGCGACCGTATCCGTGCGTGCCGTGCGGATTTGCCTTCAAAACCAAGTCGAATCTGTACAAGCACTGCAGGTCGCGCGCTCACGCGCTCAAGATGGAAGGAGGAGACGCGAGCAAGATGTCCGAGGATTCCGACATAAGTCTGTCGGATAGCGCCAGCAATGGCACAGGTACGCCGCCTCCCGCTTCGACacccacgacgacgacgacgacgacgacgactacggtAACGAGCGTCGTGAAGACCGTGAAAACCGGCAAGATTTACAAGCCGAAATTTCACACGGCGTTACAGTGTGTAAATAATGATGCCGAGACGTCTTCCTTGTCGCCGAGTTCTTCCAGTAGcagctcctcctcttcctcttgttcctcgtcttcctcttcctcctcctcctcctcttcttcctcctccaccacTACCACCGCTGCTTCCAGCTCCAAGCCAAACGCAGAAAAATTGCAAGAGCACATCGACAAGATCATCACGGATAATCAAGCGATCGTTGAGGCGGTGGATCCACGTCTACACAAGCTGATGCAGCGTCAGCAGAGCTTGGTGGAAACGAAGCAATTGGAGCTGCCGTTGAACCTGTCTTCCGCGGAACCAGAGTCTTCGAGTAGGAAACGTCGCTACAGTGACAGCTTCGCTCaggaaggaggaaaggaggaCAACTCCGAGAGTTCGATTATCAAGGATCTCCTCCTGAAAACTCCGAATACTGCGAACGGACCGTTGCCGGAGACTGGAGCAACCATTGATAACCTGACATGTTGCCCTACCTGCAACATTCCCTACACTAGCGTGGACAACTTGGAGACCCACCGTAGGTACTATTGCAAAGGCATTAGCAGTCCCCGAAGAGCAGATTATCCCGGAGAACTGGAGAAACGCGAGTCCGACTTTGACTCCAAGTCTTCCGAATCCTACTACGGCACCTTGCAACCGTTACCCTCGCCGGGTCCTCTGCTGGGTAACACTCGACTAGTCGACGCATACGCCCCACCCACGAAGAAATCAAGATTGGAGACCGTGCCGACTAGCCTGAGGTCGCTGGAGGAGCTCAGCAAGTACCCGCGTCCAAATTCTTTACAGATGTTCGGCGGCGAAGTGAGGATTCTCGACAACACGGGCGAGACAAAGACCATGAGAATCGAGCCACGACAGACCAACTCGCCAACCAGCGAGCATATAGTGAGTAGCAAGTGCGTGACTTCGGAGACGGCGTCAGTAGTGGTCAAGTCCGGATTGCATTCGGGTGGCACTATAGTCCACAAGCCACCAGGCACGCCGGCCAGCACGCCGAGTTCCTCCATATCTCTGCCTAACGTACCGAAAATGCTGGCGCCCATCATACCGAACATATCAACTCCCAATATAGCGCCGACCATGTCCTGCTACAACTACCTGGAGCCGCATTTGAACCCACTGACGAGTATCACTGCCTACAATCCGTTGACGTTGCCTCAAGCAGGCATCACCAACATTCTCCACGGCGGCAAAATAATACCCTACGTTCCCGGCATGCCCGGACCGCATACTCTGACCGGCACGCCGACTATAGACATATCTCCGAGTATAACGGCCGGCGAAGCCGGTTACAAGGTGATACCGGGTATACCGGGTCTACATATGGTACCTCAACCTTTGAATTTGGCCAGTCCGGTAAAAGTGCAAGCCAGCGTGCCCGTGCCGTCCGGTATACTCGGTCCGTTATCCGGACACGCTGGACCACCTTCCGTGCTGGATCAGCCTCTGGATTTAGCCAGCCCGGCCAAGGAATCCAAGATCAGCTTCAAGACTCCTAGCGGTGACGGTTCAAAGAGCGGCTTGACCAGTCCCAAAGTTCCTAGTGTTAAGATCGAGACCTCGACGGATAAGTATCGCGCGAGAATGCCGTCGACGCCCACCGGGGAAATCGGTAAAACGGAGCTCGATCGTCATATCAAGAATGGCGTGGCGGTGAAGTACAAGAACATGGAGAGTCctcgagagagaagagagttcACGTACGACAAGAGTCCGAAGCATTCGGATAAAGCTTTCGGTTATCCGAATGGCACGGATACTGCAAATTCCTGTACCAGTTCTTACAGTAAACTGAGGTACTCGCCCAAAACTGCTACAGAGAATAGAAAAAGGCCGTCCAATTGGGGTGTGAGCGAGGTAGACGCCGGTAGAGCATCGGTGGACACGCACATCACCGTCTCCAAATACGACCTACCGCCTCATGAAAACGGTCAATTGAAGAATAGCAGCCTCCCCGACGGACGGGCGAAACTTGCAGACGGTTACGGCGCGTTCAACGGGGCCAAGACGAAGACCGCCGAGCCTGTACCATCGGTGATACTTGTGAATCTAGATTCTTCCAAAACAGAAGTGCCAACGAGAACTTCCATAGAGGTAGTAATTGCTAAGGACAAGCCCGAGGCCAAATCGCCAAAAAGCGGCGAAGTCAACTCCGAGGAAGCGATCAACTCTAACAAGTTTGTGAGACCTACGTCGTTGCCGCTGAAACCCGGCACGTTCACGCCGAAGAAGCATCACGGAATCACGCCAACGGCGAACACACTTCCTCTCATCAGTCCGGAGACTCCGCGACCCAAGAAGTCATACGGACAACTGTATCTGAACGGGCATGCCTACACATATCTGGGACTAAAGTGTTCCACCAGGGTATTCTACTGTACCTTGAACCGACCGCAGCCGATGTACGTTACACAACAACATGGTCTGTCGATGTACTCCAATTGGAAAATATGCAAAGAGGTACCGTCGGACGTGGATATGGCGCACTACGACTCTCGGCACAGACCTTTCAACTATACCACCGCTTGGAAAAGACAGGAAGACATTCTGACACACTCCTCGCAGAGACCAACCACTCCCACCAGCCCGGATAGCGGATTGGAGAGTGACATGCAGGAAAAGGCAAAAAAGGTGACGATATTCGATGGAGGTTACGAGAGTAATGAAGATTATACTTATGTGCGCGGAAGAGGTCGAGGACGTTACGTCTGTAAAGAATGCGGTATTCGGTGTAAGAAACCATCTATGCTGAAGAAACATATCAGAACGCATACAGATGTTAGGCCATATACTTGCAAACACTGTGCCTTCAGTTTCAAGACAAAAGGCAACCTCACAAAACATACCAAGTCTAAGGCTCACTACAAGAAATGCGTGGAATTGGGCGTGGTGCCGGTGCCGACGACCGTTTGCGACGAAAACACCGACAAGGAGTCCATGGTGCAATCGACCGCTGGTGGCGCCAACGCGGAGGAATCgtcggaggaggaagaggagagcgaCGGCGAAGAGAGCGAAGAGTCTGGTAGCGAGGAACAAGAAGCAGCGCAAAGTCTACTGAGTCTTTCGCAACGTAACAACACAAACAGACTTCCAGGCTTGCTGCCGTCGGGAAGACCCACGACGTATCCGTACGCTCTGACCTTACCGATCTTACCGACAACTTCTTCAACCACGGTGAACGTCGTCACGTCCACTGTGGCGAGCACAACAGCCATGAGTAGTCTGAACGTGACCAACCAAGGGACAACTTTGATTCAAAGCGAGTTGTCGCATCGTTACTACTTCCCGTCGAATCGAGTAACATCGGAGGAATCGAGGAGCAGCGTCATCCAATCGGCCTCGAAGAAAGACGACTCGGACGTCGAGATGGAGGAAAACGAAATCGGTGGTATCGCAGAATTGCGTCACCAATCCATGTCTCAGCCGATGGATCTGACGACGAAGCAGACGGTTCAACCGTTGCCGTCGCCGATCCCGCAAAGAGCTAGACCCGCGGATATCCTGACTCCCGTCTCGGAACCGGTCCTCCTGCAAACGATAGTCCAGACGATGGAACGACTGCCTATACAGGGGAGAGAGTGGAAACCGGATGCGCAGGGCCATATGTTGCAGGCGTATCTCACCGAGAGATACGTGATGGACAGTAAAATCAAGCAACAATATCGCGTAGGAAATGGCAAGTTGGACAAACAAAtgcaagagagagatatttATCCGCGGCATCAAGATACCACAAAATCCAGGCATATAGAATCCAACGGCGTCCCAATGGTGACGTATACCGACCCCAGCAAGATACAACACACGGTTATGGAAAGCAGAGTTAAGCACACGACAAAACATACCAGCGACGACATCAAGATGGAAATCAGGGAAAAGATATATCAAAACAACATGGCGATGGAAAGACGAGCGTTCGACTTGGAGACCACTCAAAAGGACAAGGAGCAGTCTAGTCGCTTGCTTCCCGAACGTGAGAGTTTCGAGCTCGTTTTAGCCAGTCCCATTACAAGACCGAATATCGAATACGGTCATGTGTCTATGAGCAAAAACAATAACTCTATGGACAGATCGATTTATTCTGTAGACGCACCTGTCTTGAGCACGTCCAGTATCGTCGATTGTCATTCACCGAAATCCTTGAACATGGACACCAACAACCGGCTGCCGCTGATGCAACACACTAGCATCGACGTCGACAGAAGTTCCATGTTTAGTGCGATCAAGATGATGGGCGAAATGGAAAGACCTAGAGAGTGTCACCCAGTCAATCAGGAGATGAGAACACCGAGCAACGACGTGCGAATGCAGAGCCCGCGGAATCTCGACCTGAGACCACCCAGCAGGGAGATCAGAGCGTCCGGTCAAGAGTACAGAACGCAGAATCAAGAGCTGAGACTACCTAGTCAGGAGCTGAAGATGCGGGGCCAGGAGATGAGACCGCCTAGTCGCGAGTACAAGCCGTTCGCTCACGAGATGCAAGTCATTCAGGAGCTTATGCCGTCGACAAACATAGAAATGCGGCAAACAAGTTCAGATAATAGGCCGCCTAGCAGAGACATGAGAGCTCTCTCGGAATACAGAGCGCAGCCTCAAGATCTCAGGCCCAGTTATGAAATAATGCAATCGCCTATGCACGAGCCTCCCAAGACGAAAAACGTTGATGTGAGAAGTGCGGTACCGGTCGTCTATCACTATGAAACGAAACACACTGCGGAAGCAAGCAAACAGAATACGCCGGATAACGCGAAGCACACGATAGCCAGGAAGATAGTCGTCGGCGGTCCGGATTTTCGATCGCCCTCACCGAATACGGCGAATCCAAAACCGCAAGCGGAATTTTTACAACCGTCTAATGGTCCGACGCCTAACTATGTTACTTACAGTGTGACGGAGGACGGTAGGAGCGTATGTGGTATTTGCAACAAAGTGTTCAGCAAGCCTAGTCAGTTACGGTTGCATATCAACATTCATTATTTCGAGCGGCCATTCAGATGCGAAAGTTGCGCGGTTTCCTTCAGAACCAAGGGCCACTTGACGAAACACGAGAGATCGGTTTCCCATCACAATAAGGTCAGTATGACTTCTACGTTTGGCGCGGCAACCACCAGCAATCCTAGGCCCTTCAAGTGTACAGATTGTAAGATAGCGTTCAGAATACATGGACATTTGGCCAAACATCTTCGCAGCAAGATGCACATTATGAAGTTGGAGTGCTTGGGCAAATTACCGTTTGGCACGTACGCGGAAATGGAAAGGTCTGGTGTCAACTTGAACGACATCGACACCACAGACTGTGATAATAGCCTTAATAGTCTGCAGATGTTGGCTCAAAGGTTATGCGAGAAGGACCCCGCCAAGATCGCGCAATGGGACTCGGAGAGTGTGCCCGTCATTGGCCAAGCGGTGAGCGGCGGCGATACTTCATCGGACGAGGGCGAACCCATACCGCAGCACGCGCTTCACGCTCAATACGCGAAAGCGACCACGGACGCGGACATCTCCCGATCATATCACATGCCAATCACCAGCGACGAATCGAAGGTCATTAACCACGACGTTCGCCTTCGCAGTCCTCACTTCGGTCAGCAAAGACGCGACTACGCCGTGAAGGAACAGCGACCGGCCCCGGCTGCCGTTTCGTCGGAGGATACGAGAGCGGAAGACAATTTACAATCGTACAAGTGCCAAGTTTGCCCCGTGTCCACGCGTACCGTAAATGAATTACAGGTACATTGTTTTGTTGAACATAATGTTGAAACCGATTCTAGTACAAATATTGTTCACGGAGACAGGAGTGTGAGTAAATGTAGGGAAAAAGAGAATACTCAGAGAAGAATCACGGAGGAATCTTCCGCGATCATAATAGAGAAAAAGATCGTAATAGAGGAGAGGATCGTAATAGACAAAAGATAG
- Protein Sequence
- MTTETHTVAMTDPQLTNNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVASKAEPKKETTANNATVETPKRKDADKDNKETKEPAKLEASPEPEGEPTETRKSGYVCPYCNLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKMSEDSDISLSDSASNGTGTPPPASTPTTTTTTTTTTVTSVVKTVKTGKIYKPKFHTALQCVNNDAETSSLSPSSSSSSSSSSSCSSSSSSSSSSSSSSSTTTTAASSSKPNAEKLQEHIDKIITDNQAIVEAVDPRLHKLMQRQQSLVETKQLELPLNLSSAEPESSSRKRRYSDSFAQEGGKEDNSESSIIKDLLLKTPNTANGPLPETGATIDNLTCCPTCNIPYTSVDNLETHRRYYCKGISSPRRADYPGELEKRESDFDSKSSESYYGTLQPLPSPGPLLGNTRLVDAYAPPTKKSRLETVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPTSEHIVSSKCVTSETASVVVKSGLHSGGTIVHKPPGTPASTPSSSISLPNVPKMLAPIIPNISTPNIAPTMSCYNYLEPHLNPLTSITAYNPLTLPQAGITNILHGGKIIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGIPGLHMVPQPLNLASPVKVQASVPVPSGILGPLSGHAGPPSVLDQPLDLASPAKESKISFKTPSGDGSKSGLTSPKVPSVKIETSTDKYRARMPSTPTGEIGKTELDRHIKNGVAVKYKNMESPRERREFTYDKSPKHSDKAFGYPNGTDTANSCTSSYSKLRYSPKTATENRKRPSNWGVSEVDAGRASVDTHITVSKYDLPPHENGQLKNSSLPDGRAKLADGYGAFNGAKTKTAEPVPSVILVNLDSSKTEVPTRTSIEVVIAKDKPEAKSPKSGEVNSEEAINSNKFVRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEVPSDVDMAHYDSRHRPFNYTTAWKRQEDILTHSSQRPTTPTSPDSGLESDMQEKAKKVTIFDGGYESNEDYTYVRGRGRGRYVCKECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHTKSKAHYKKCVELGVVPVPTTVCDENTDKESMVQSTAGGANAEESSEEEEESDGEESEESGSEEQEAAQSLLSLSQRNNTNRLPGLLPSGRPTTYPYALTLPILPTTSSTTVNVVTSTVASTTAMSSLNVTNQGTTLIQSELSHRYYFPSNRVTSEESRSSVIQSASKKDDSDVEMEENEIGGIAELRHQSMSQPMDLTTKQTVQPLPSPIPQRARPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAQGHMLQAYLTERYVMDSKIKQQYRVGNGKLDKQMQERDIYPRHQDTTKSRHIESNGVPMVTYTDPSKIQHTVMESRVKHTTKHTSDDIKMEIREKIYQNNMAMERRAFDLETTQKDKEQSSRLLPERESFELVLASPITRPNIEYGHVSMSKNNNSMDRSIYSVDAPVLSTSSIVDCHSPKSLNMDTNNRLPLMQHTSIDVDRSSMFSAIKMMGEMERPRECHPVNQEMRTPSNDVRMQSPRNLDLRPPSREIRASGQEYRTQNQELRLPSQELKMRGQEMRPPSREYKPFAHEMQVIQELMPSTNIEMRQTSSDNRPPSRDMRALSEYRAQPQDLRPSYEIMQSPMHEPPKTKNVDVRSAVPVVYHYETKHTAEASKQNTPDNAKHTIARKIVVGGPDFRSPSPNTANPKPQAEFLQPSNGPTPNYVTYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLNSLQMLAQRLCEKDPAKIAQWDSESVPVIGQAVSGGDTSSDEGEPIPQHALHAQYAKATTDADISRSYHMPITSDESKVINHDVRLRSPHFGQQRRDYAVKEQRPAPAAVSSEDTRAEDNLQSYKCQVCPVSTRTVNELQVHCFVEHNVETDSSTNIVHGDRSVSKCREKENTQRRITEESSAIIIEKKIVIEERIVIDKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -