Basic Information

Insect: Odontomachus brunneus
Gene Symbol: salm
Assembly: GCA_010583005.1
Location: NW:3996030-4009177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.8e-06 0.00025 20.7 0.9 1 23 405 427 405 427 0.98

2 9 7.6e-06 0.00049 19.8 2.1 1 23 433 455 433 455 0.98

3 9 0.048 3.1 7.8 3.8 2 23 825 846 824 846 0.98

4 9 3.3e-08 2.1e-06 27.2 0.6 1 23 852 874 852 874 0.97

5 9 5.3e-05 0.0034 17.1 3.5 1 23 884 906 884 906 0.98

6 9 0.0016 0.1 12.5 1.9 2 23 1208 1229 1207 1229 0.97

7 9 0.024 1.5 8.8 1.0 1 14 1235 1248 1235 1249 0.92

8 9 4.4e-07 2.8e-05 23.7 2.1 3 23 1468 1488 1466 1488 0.96

9 9 6.7e-07 4.3e-05 23.1 1.1 1 23 1494 1516 1494 1516 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.8e-06	0.00025	20.7	0.9	1	23	405	427	405	427	0.98
2	9	7.6e-06	0.00049	19.8	2.1	1	23	433	455	433	455	0.98
3	9	0.048	3.1	7.8	3.8	2	23	825	846	824	846	0.98
4	9	3.3e-08	2.1e-06	27.2	0.6	1	23	852	874	852	874	0.97
5	9	5.3e-05	0.0034	17.1	3.5	1	23	884	906	884	906	0.98
6	9	0.0016	0.1	12.5	1.9	2	23	1208	1229	1207	1229	0.97
7	9	0.024	1.5	8.8	1.0	1	14	1235	1248	1235	1249	0.92
8	9	4.4e-07	2.8e-05	23.7	2.1	3	23	1468	1488	1466	1488	0.96
9	9	6.7e-07	4.3e-05	23.1	1.1	1	23	1494	1516	1494	1516	0.97

Sequence Information

Coding Sequence: ATGTTTGACTCACGTCTGGAGGAGGCCTCCGCGCAAGCCCCCGTCGGGGGCGAGATGCGACTCATGAGGTGGAGCATAACGCGGCGATTGGAGTCGCGCGGGTTTAGTAAGTCGCGGCATGAGAAGAACACGCTGCTGTTGGCCGAATCGCCGTCTGGTCGCGTGTCCGACGCGAATGTGCAGGaagaagaaaatgactTCACTTCAGACGGTGAAGAAAGTGGCGGTGGCGGAGCAGTTGGCGAAGAAGCCGTGGATCTCACCGCGACGAGGCCGCAccatggcgacgacgacgataaagACGCCGAGGATCCtttggaagaggaggaggaagaaggcgTCGACGAACAGGATGAtcaggaggaggacgaggagggaTCTCGCAAACAGATTCGCCATCGGCAAGACGCGgagaacaataataattttgtggaaAGCGGAGCGGCTTCCTCCATCTTCCCACCCGCTGGGACTAGTCACGTCACTCTCGAAGCCCTTCAGAACACGAAGGTAGCGGTGGCTCAGTTCGCGGCAACTGCCCTCGCCGGTGGTGCTGACAGTGAGGCGGCTCTGCAGGATCTGGCTTTTCTGCAAAGCACGTTATACACACTTCAGCATCAACAGGTATTCCAGTTGCAGTTGATAAGTCAGCTGCAGCAGCAATTGTCGATCACTCACGGCCAAACCGTGCCACAAGCATCGACAACGGATCCAGTGGACAGCAAAGAGGCGTCGCCATCTCCGATCATTCACACGAAACCATTATCGACTCTCACGTCGCCACCCACTTCGCGACCGCCGAGTCATCATCAGCAGACGTCACCGGCGCCGATGACGCCGAATCTGCTTCAGGAGAGGCCGACCTCGACGAGCAGTGCCTCCCCGTTGAATCTACCCCTGTCTACGGCCAGTGCAACGTCGACCACGGCAACGACCGCTTGCAGCCAAATCTCGCAGCCGCACCAGATACCGCATTGCTCGATAAGTTCTTCTCTCGCCTCGTCAATCATAACGAACACGGATCCACCGCCGCTTCACGAGCCAAATACTCTGGAGATGCTGCAGAAACGCGCCCAAGAAGTCTTGGACAATGCAAGTCAAGGCCTTTTGGCCAACAATCTGGCCGATGAGCTCGCGTTCAGAAGCGGCAAAGGCTCACGCCTACAACCGTACGACTCGAAATCgagcggccgcggcgagcccTTCTTCAAGCATCGGTGCCGCTATTGCGGCAAGGTCTTCGGTAGTGACTCGGCGTTGCAGATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAGTGCAACGTCTGCGGCAGCCGATTCACAACTAAGGGCAACCTGAAGGTCCACTTCCAGAGGCATACGGCCAAGTTTCCGCACGTAAAGATGAATCCGAATCCCGTTCCAGAACATCTAGACAAGTACCACCCACCCCTCTTGCAGCAAATCGCTTCTGGGCAGAGGCCAATGCCGTccccgccaccgccaccgccaccctCTCATCATCCCTCGTTTCATCCGGCGGCAACGCACAATTTCCTACCACCTCAGCCGCCCATACCTTTGAGTCTCACCTTGCCTAGTATGCCACCCATTTACCGACCACAGAATATTAATCACCGGGACGATCAGGATGTGCCGGAGAACCTTAGTAAACCCGTAACCGCCGCCCCGTCGACGTCCCCGCATTCCCCCGTCGCCATGTCGAACTCTCGTCATTCCTTTCACGACAATCACCAACAGCAGCAGCCTGCACAGCAGAAGCAGCATCAGCAACAGCTCGAGCAAAGAGAGGAGATCAAGCTCGAGCACAGGTCGCCGGGACAGGAACAATACCAACCGCGACCGACGAGTCAAGAGAACGCCGGGCGAATAACTCCGAAAAGAGAGCCCGATGAAACGGAGGAACCAGTGGAGGAAGAGGCCGAGGACTACGAGGAGACCACGAGGCGATACTTGAATTCGCCTCAATCTTCGGTGAATCCGTCGTCACAGCCGCAAACGTACGAGGACTGTAGTATGGACAGCAAGATCAGTGGGCGTTTGGAGGGCGACGGTGATCTGGAAATGGACGAAGAGACGGAAGAGCAGCCAGAGAATCTGTCCGGCAGAGGTGCGATTAGTCGCCTGCCGCAACAGATGATCGCGTATCCGGGAGCGTCTCCAGCTAGCAGTAGCGCGAGTAGCGGCAGTCTCCAGACTTCGTTTGCCGGAATTCTATTTCCAGGCCCACCGGCGCACCATCAGATGCCTCATCTGTCCGCAACGACGGGTAGTGCGGCGCCAATTATTTCCGCGGGCGAGATGATCGATCCGGCCAAGGATCCGGCGATTTATTCGAGCCTATTACCGCGACCAGGCAGCAATGATAACTCTTGGGAGAGTCTTATTGAAATCACGAAAACCTCGGAGACGTCCAAGCTACAGCAACTGGTAGACAACATCGAGCATAAACTGACCGATCCTAATCAGTGCGTCATTTGTCACCGAGTGCTCTCCTGCAAGAGTGCGTTGCAAATGCACTACCGTACTCATACAGGTGAGCGTCCGTTCAAATGTAAAATTTGCGGCCGCGCGTTCACCACGAAGGGTAATCTGAAGACCCACATGGGAGTGCATCGGGCGAAGCCTCCGTTGCGAGTGTTGCACCAGTGTCCCGTGTGTCACAAGAAATTCACAAACTCGTTGGTGCTCCAGCAACACATACGTCTACACACCGGCGAGCCCACTGATCTCAGTCCGGAACAGATCCAAGCCGAGGAAGTGAACGAATTTCCGTCCGGTTACCATCACCATCCGCTGGCATCCTTCTTGCCGCAAGCATTCCCGCCATTGCATCCGACTAGTAGTGGCTTTTTAGGATTCCCTCCGAGACAAGTGACAACGGTCGAGCGACAAGTGCAGGAGAACGACATGGAACagaaagacgagcagcagcaACAACCGCGCCAACAGCAGCAGCCACAGCCGAGATTCATGGAGGATCACAACGAAGAAGTGGAGGACCAAGAAGAAGATGAGAAGGATCGCAGGGAGGACGACGAGAGGTGCGAGATGAATCGCGACCGACGCAGCGCCGACGTCGAGGAGGAGCACGAGCACGACGGCGAGGACACCGAGCACAAGGACATTCCTCTTCCGATGTTCTCGACGTCGCTAGCGGCACTTGAGAACCAAGTGAGGACCATCACGACCACAGCCACGACCACGGTGGCAAACGTCGCCAGGTCGCCGCCCTATCATCGGTACAACGGCAGCGAGAAGAGCGACAGTCCGCCGACATCCGGCGCGCCGCTCGATCTGACTCCGCGCGCCTCGTCGACGCCAGCGTCAGTGGCTTCGGCGTCACCGACACCGCCACCCCAGCCTGCACCGCATCATCCGCCGCATCCCTTCGGCATGTTCGCAGGGCTGCTGCAAGCGGTGTCCTCGACTCCCGCCACGAGCACGATGGGCTCGTCGAGCATAAACAGCGTCGCCTCGATGAGCGCCGTGACGCCGGGAAGCGGTGGCAGCGGACCATTAGCTTCCCTGACCACCTCGGCCGTACTAGCCGCGACGTCCTCCTACAATCCGCTCGGTCTAGCTGTCGGAGGGTCAGCAGTACGTGGAAACACCACATGTAATATCTGCTACAAGACGTTCGCGTGCAACTCCGCATTAGAGATTCATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGACCGAGGCTTTTCCACGAAgAACGACGGTTCCGGTCAACAAGTATGCTCCTGCGCGGACCAACCCTTTGCCGCGAAGGGTCCGATCCCCCCACAACCCAATCCCCAATATCACTCGTATCCGGCGAGATCGGCCGTCGGAAGTCGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAGCGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGTCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGCTGACTCACAAGATCCGCGATATGCCGCCACATCTGTTCAGCGACACAAAACaccaacagcaacagcaacagcagcaacagcaacatcagcagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaatctCAGGATCACGAGACTTCCAGGAGTCCTATGGGCACCGACGACTCGAGCCTACCGCctcctccaccgccgccgccaccgccacccccGTCGATGCCACCGACATCTATCGAATCGGCGATCCCGGTAAAAAGGTCACCGCCGGACGGAAATCTACCAGCGCCGAAGAGATCAGCCAGCGTGGTGAGCAAGCACTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATCCATATGAGAACCCACACTGGCGACAAACCATTCCCATGCCACGTCTGCCAGAAGGCCTTCACCACCAAAGGCAACCTCaagGTGCACCTGGGCACTCACATGTGGTCCAACGGGGCGTCGCGTCGAGGTCGACGAATGTCGTTGGATCTGCCACCCCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAACGACGGCCGGATCTCTTTTACCCGTACCTTCCCGCGCCGTTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATCTCGGTGATTCAAAGTAACAACGGCCTACCGCCGCACTCCGTGGGCGCGGGCAAGTACGCGAGCCTGTTCGGCTCGGTGTACGGCGCCGGCGGGGGTGGTTTCCCGCTGGACAAGCAGCCGACGGCGGCGAGCAGCAACGGACCCTTGGTGGACGGCAAGTCCGCGATTCCCTCCGGCTCCATGCTGTTCCagacgccgtcgccgtcgcatTCGCCCGGCACGCCGTCCTCCAACAGCGGCAGCCAAAACTCCGCCGGCGTGACCGCTTGGACCGCCGGCGACGCGCTCCAACATCACTTCGACCGAGAGACGCCGAGCAGAGGTGAGAATGACGCGACGCCACCCGCTGCGCGGCTACCGCCACCGCCGACCAGGGGCGAGGGATTGGCCGCGTGA
Protein Sequence: MFDSRLEEASAQAPVGGEMRLMRWSITRRLESRGFSKSRHEKNTLLLAESPSGRVSDANVQEEENDFTSDGEESGGGGAVGEEAVDLTATRPHHGDDDDKDAEDPLEEEEEEGVDEQDDQEEDEEGSRKQIRHRQDAENNNNFVESGAASSIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLAFLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQTVPQASTTDPVDSKEASPSPIIHTKPLSTLTSPPTSRPPSHHQQTSPAPMTPNLLQERPTSTSSASPLNLPLSTASATSTTATTACSQISQPHQIPHCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLQPYDSKSSGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPPSHHPSFHPAATHNFLPPQPPIPLSLTLPSMPPIYRPQNINHRDDQDVPENLSKPVTAAPSTSPHSPVAMSNSRHSFHDNHQQQQPAQQKQHQQQLEQREEIKLEHRSPGQEQYQPRPTSQENAGRITPKREPDETEEPVEEEAEDYEETTRRYLNSPQSSVNPSSQPQTYEDCSMDSKISGRLEGDGDLEMDEETEEQPENLSGRGAISRLPQQMIAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQMPHLSATTGSAAPIISAGEMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNSLVLQQHIRLHTGEPTDLSPEQIQAEEVNEFPSGYHHHPLASFLPQAFPPLHPTSSGFLGFPPRQVTTVERQVQENDMEQKDEQQQQPRQQQQPQPRFMEDHNEEVEDQEEDEKDRREDDERCEMNRDRRSADVEEEHEHDGEDTEHKDIPLPMFSTSLAALENQVRTITTTATTTVANVARSPPYHRYNGSEKSDSPPTSGAPLDLTPRASSTPASVASASPTPPPQPAPHHPPHPFGMFAGLLQAVSSTPATSTMGSSSINSVASMSAVTPGSGGSGPLASLTTSAVLAATSSYNPLGLAVGGSAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDGSGQQVCSCADQPFAAKGPIPPQPNPQYHSYPARSAVGSREKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPVVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDTKHQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQSQDHETSRSPMGTDDSSLPPPPPPPPPPPPSMPPTSIESAIPVKRSPPDGNLPAPKRSASVVSKHLCQICNKNFSSSSALQIHMRTHTGDKPFPCHVCQKAFTTKGNLKVHLGTHMWSNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPPHSVGAGKYASLFGSVYGAGGGGFPLDKQPTAASSNGPLVDGKSAIPSGSMLFQTPSPSHSPGTPSSNSGSQNSAGVTAWTAGDALQHHFDRETPSRGENDATPPAARLPPPPTRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: -
80% Identity: -