Basic Information

Insect: Odontomachus brunneus
Gene Symbol: ZBTB40
Assembly: GCA_010583005.1
Location: NW:2346138-2350572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00037 0.023 14.5 0.9 2 20 47 65 46 67 0.93

2 15 0.0094 0.6 10.1 0.2 2 19 72 89 71 92 0.91

3 15 6.4 4.1e+02 1.1 0.3 6 23 103 121 100 121 0.78

4 15 6.5 4.2e+02 1.1 0.2 8 20 136 148 130 150 0.77

5 15 0.0066 0.42 10.6 0.4 5 23 163 181 162 181 0.96

6 15 0.00012 0.0079 16.0 0.2 2 20 189 207 188 209 0.94

7 15 0.0058 0.37 10.7 0.2 2 20 214 232 213 234 0.92

8 15 0.00057 0.037 13.9 4.9 1 23 240 263 240 263 0.98

9 15 8e-06 0.00051 19.7 0.7 3 23 273 294 271 294 0.96

10 15 2.3e-05 0.0015 18.3 2.9 2 23 302 324 301 324 0.96

11 15 0.00058 0.037 13.9 0.3 2 20 332 350 331 352 0.93

12 15 0.0073 0.47 10.4 0.5 2 21 357 376 356 377 0.93

13 15 0.0012 0.074 12.9 4.1 1 23 383 406 383 406 0.98

14 15 6.7e-06 0.00043 20.0 3.4 2 23 415 437 414 437 0.95

15 15 6.2 4e+02 1.2 0.1 9 21 452 464 445 465 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00037	0.023	14.5	0.9	2	20	47	65	46	67	0.93
2	15	0.0094	0.6	10.1	0.2	2	19	72	89	71	92	0.91
3	15	6.4	4.1e+02	1.1	0.3	6	23	103	121	100	121	0.78
4	15	6.5	4.2e+02	1.1	0.2	8	20	136	148	130	150	0.77
5	15	0.0066	0.42	10.6	0.4	5	23	163	181	162	181	0.96
6	15	0.00012	0.0079	16.0	0.2	2	20	189	207	188	209	0.94
7	15	0.0058	0.37	10.7	0.2	2	20	214	232	213	234	0.92
8	15	0.00057	0.037	13.9	4.9	1	23	240	263	240	263	0.98
9	15	8e-06	0.00051	19.7	0.7	3	23	273	294	271	294	0.96
10	15	2.3e-05	0.0015	18.3	2.9	2	23	302	324	301	324	0.96
11	15	0.00058	0.037	13.9	0.3	2	20	332	350	331	352	0.93
12	15	0.0073	0.47	10.4	0.5	2	21	357	376	356	377	0.93
13	15	0.0012	0.074	12.9	4.1	1	23	383	406	383	406	0.98
14	15	6.7e-06	0.00043	20.0	3.4	2	23	415	437	414	437	0.95
15	15	6.2	4e+02	1.2	0.1	9	21	452	464	445	465	0.84

Sequence Information

Coding Sequence: ATGATACCTAGTACTTCTCAAGAATCGGCACAGAACGTATCGTCTTCAAAAATTAGTAATTCTTCAGTTACGGATCGTCCGGAAACCCAGAATGTCAAGTCAAAAATGATGGCCTCGATGGAGCATGAGTAcccttggtcgtgctctgtatgCGGCAAACCTTTCAGGCACAAGCTCTCCTTTTTGAAACACAGGACCTTGAATGAATGCCTGATATGCAAAATTTGCCACATGAAGTTTGACCTGCCAGAAGAATTATATCGTCACAATGAGACGTGTCGTAGACCAGAGTATCCCCACAGCAAGTGTTCCTTTGGTGCAGATACATTGATGAGTTTGAGTGAACACATGAAATCGGTACACAATACTATCGACGATTTACCGATATCTTGTGACATACGCTTCAAGAATTTTTCAAGGCGGGATATTCTGAAAAGACATAAGGAAACATGTTATGTGGATAACATACAATCGGTAATATATGACAAGTGTGATTGCATCTTGAAGGACAAATATACCTTACAGGTGCACTTAAGAATACACACAAAGGGGAACACTTTGATGAAATGTTCTGCATGCGGCAGAAATTTCAAAAACAAGGTTCTCCTCGAGAAACACATAAGCTTGAATAATTGCCTGCAATGCCAAATTTGCGACCAGAAGTTTGACgtgttagaaaaatttattcgtcaCTATACAATGTGTCTTAAACCTGAGTATACCTGTCGCGAGTGTTCTTACAAGACACGTACAAAGAACTGTTTGATTAAACACATGAAATCAGTACACAATGCTATCGACGTTTTACCGATATTTTGTGACATATGCTTCATGAGTTTTGAGAGGCAGGATAATCTTAAGAGACATAAGGAAACAGTCCATGCACAAAGCATACAATCGTTAAAATGTGACAAGTGTGATCGCATCTTCAATAAAAAACGTTCCCTAGAAAGTCACTACAGAAGAAAGCATCCAAACGCGGACACGTTGATGAAATGTCTTGCATGCGGCAGAAGTTTCAAATACAAGGTTTCCTTCGAGAAACACATAAGTTTGAATAATTGCCTGCAATGCCAAACTTGCGACCAGAAGTTTGACgtgttagaaaaatttattcgtcaCTATAAAATGTGTACTAAAACTGAGTATACCTGTCGCGAGTGTTCTTACAAGACAGATACAAAGAACTGTTTGATTAAACATATGAAATCAGTACACAATGCTATCGACGTTTTACCGATATCTTGTGACATATGCTTCAAGAATTTTTCGAGGCGGTATCATCTGAAGAGACATAAGGAAACAGTTCATGTGGATAACATACAACCGGTAAAATGTGACATACGTGGTAACACCTTGAAGAACAAACGAACCCTAGAGAATCACTTAAAAAGCACACGCCAGAGGTGGACACGTTGA
Protein Sequence: MIPSTSQESAQNVSSSKISNSSVTDRPETQNVKSKMMASMEHEYPWSCSVCGKPFRHKLSFLKHRTLNECLICKICHMKFDLPEELYRHNETCRRPEYPHSKCSFGADTLMSLSEHMKSVHNTIDDLPISCDIRFKNFSRRDILKRHKETCYVDNIQSVIYDKCDCILKDKYTLQVHLRIHTKGNTLMKCSACGRNFKNKVLLEKHISLNNCLQCQICDQKFDVLEKFIRHYTMCLKPEYTCRECSYKTRTKNCLIKHMKSVHNAIDVLPIFCDICFMSFERQDNLKRHKETVHAQSIQSLKCDKCDRIFNKKRSLESHYRRKHPNADTLMKCLACGRSFKYKVSFEKHISLNNCLQCQTCDQKFDVLEKFIRHYKMCTKTEYTCRECSYKTDTKNCLIKHMKSVHNAIDVLPISCDICFKNFSRRYHLKRHKETVHVDNIQPVKCDIRGNTLKNKRTLENHLKSTRQRWTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -