Basic Information

Insect: Odontomachus brunneus
Gene Symbol: -
Assembly: GCA_010583005.1
Location: NW:930549-959365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1e-05 0.0013 18.4 0.7 1 23 147 169 147 169 0.95

2 15 0.00036 0.023 14.5 3.3 1 23 175 197 175 197 0.97

3 15 0.00028 0.018 14.9 0.0 1 23 301 323 301 323 0.98

4 15 0.033 2.1 8.4 0.3 1 23 329 352 329 352 0.96

5 15 0.00052 0.033 14.0 2.5 1 23 379 401 379 401 0.98

6 15 1.4 90 3.2 0.0 1 23 416 438 416 438 0.86

7 15 1.2 77 3.4 0.3 2 23 445 467 445 467 0.94

8 15 0.0032 0.21 11.5 3.0 2 19 475 492 475 496 0.95

9 15 0.00016 0.01 15.6 3.5 3 23 504 524 502 524 0.97

10 15 0.011 0.73 9.8 0.1 3 23 531 551 530 551 0.97

11 15 6.7e-06 0.00043 20.0 0.4 1 23 560 582 560 582 0.98

12 15 0.0029 0.18 11.7 0.2 3 23 590 610 588 610 0.97

13 15 0.0026 0.16 11.8 0.2 3 23 618 638 616 639 0.94

14 15 0.029 1.9 8.5 0.0 1 23 653 675 653 675 0.92

15 15 0.0095 0.61 10.0 0.0 1 20 1138 1157 1138 1160 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1e-05	0.0013	18.4	0.7	1	23	147	169	147	169	0.95
2	15	0.00036	0.023	14.5	3.3	1	23	175	197	175	197	0.97
3	15	0.00028	0.018	14.9	0.0	1	23	301	323	301	323	0.98
4	15	0.033	2.1	8.4	0.3	1	23	329	352	329	352	0.96
5	15	0.00052	0.033	14.0	2.5	1	23	379	401	379	401	0.98
6	15	1.4	90	3.2	0.0	1	23	416	438	416	438	0.86
7	15	1.2	77	3.4	0.3	2	23	445	467	445	467	0.94
8	15	0.0032	0.21	11.5	3.0	2	19	475	492	475	496	0.95
9	15	0.00016	0.01	15.6	3.5	3	23	504	524	502	524	0.97
10	15	0.011	0.73	9.8	0.1	3	23	531	551	530	551	0.97
11	15	6.7e-06	0.00043	20.0	0.4	1	23	560	582	560	582	0.98
12	15	0.0029	0.18	11.7	0.2	3	23	590	610	588	610	0.97
13	15	0.0026	0.16	11.8	0.2	3	23	618	638	616	639	0.94
14	15	0.029	1.9	8.5	0.0	1	23	653	675	653	675	0.92
15	15	0.0095	0.61	10.0	0.0	1	20	1138	1157	1138	1160	0.94

Sequence Information

Coding Sequence: ATGGATGTTGGTGGTGATTTAACTCTACAATGGGTGGAAGAAGTAGGAAATGTAGAACTCCACGAGGAAGTAATATGCGATCTAGAAGCACAATTGGTTGCTACAGAAGAAGAGGTCATTGGTGCTTGCGAGGAAGTGGCAGTAGAAGAAACTGTCGAATCTGTCCCTGATGTAGCATCTACAACAGAGTCTGAAATATTAATGGTACCTCAGTCTAGCGATATGGAGTCTATTTATATTGTGCCACAAGATCAAGGTCATGACTATTTGAACATACAAGTCACAGAAGAAGTAATAGCTGATAATTGGAATAGACAAGGCCCAGATGACGGAGTCGAGATTCCAGAAGCAAAGGTAACACATGACAATTTGCTGGAATATGATGACATGGAGATACCACTGCCAATCAATCAGGACTCGAATATCAACATCCGACCATATCCGTGCGACTTCTGTAGCCGTAGATTCCGGAAGAAAGCAAATCTAATGAACCACATGGTGGCGCATCAAACGGACCGTCCACATAGCTGTAATTTATGTGGAGCACGATATGTACGCAAATGTGATTTAAATAATCACCTGAAGATCCATGCGTATGCCCCATCGTCGCGGGACAGTTTGGAGGACGAGATAAATGACGAGGACTCCTTGGTACCAGAGGAGGAGGATATGACAACAACTGTCAAAGGCAGACGTAAAAAAGTACAATCAAGTGTGCCACGCAAGCGAAAAGGCAATAACGTAGGTTTGCCAAAACGACACAACATTGAGGATGCTAGTAGAGTCAAGATGGAGATGGGCAATAGCAATTACGCATCCAGTTCAAGGTGGCATGAGGAGATGTCTGTCACCAGCGAGCAGCAGCCGCCGAGATGGCCAGTCACTGATCCTACTAAACCCTATGTTTGCCAGTTTTGTGGCGTTGGTTTTGCAAGAGAGAAGGCGTTGGCTTCACATGCGCGTGTTCACGGCGGTGATAGTCCATTTGAATGCACCTCTTGTGGCGAAATGTTTTGGGATATTAACAGCCTGCAAGAACACTTTCGCGTCAAACATGGTGGCACTATACCGCAATCTGATACGGAAGAATACGACAATGATACCGCTTACACGAGCGAGGAAAGATTTGGCGAGTTTTATTGTAACACCTGCGCTGCACCATTTCATCGTCTGGATTTACTTAAGCGACATCAAAAAACTCATATTAAGCAAGAAATGGATACAATAGAGAGTTCCAGTCAACATCACGTATGTAATGTTTGCGGTGAATGGTTCGAAGAGGCATTGGCACTGTTAGCACATGCAGAACTTCATGCTAGATCTCCTAGTCGTCGTTGTTTACTGTGTGGAGCGAGATGTCGTGACGATGCTGACGTAGCAGAACATGTACGACAATATCACGCTGAGGATGCGCCACCGAATACGTGCACACTCTGTGGAAAGACATGCAAAGATAAGCGTAGCTTATTGAAGCATTCATGGGTCCACAATGTTGATAAAACCTTCGGTTGTACCAAATGCGGAAAACGCTTTCATAGCAAAGCCAGATTGCGaagACACATGGTATCACACCGTAATAAAATGGTAGCTTGTGATGAATGCGGTGAAGAGTTTCCAGACGGACGAGCTCTCGTGAGCCATCGTCATTCGCATAATAAGGATCTGGGTGGCCGTTCCTTCCCGTGCCGTGAATGCGGCAAGACCTTCGGCAGCCGCAGCTCACAACAGATTCATATACGTATTCATACAGGCGAAAGACCATATGGTTGTCGGTTTTGTTGGAAGGCATTTGCCGATGGTGGCACTTTGAGAAAGCACGAACGTATTCACACTGGCGAGAAGCCCTACGGTTGCGCCATTTGTCCTCGAGCTTTTAATCAGAGAgtGGTCCTTAGAGAGCATGTGCGCGCTCATCATTCTGGACCAGATCCTAAATGCGTAGGTAGCGCGACGCCATTTTTATGTAAGGTATGCGGTGAAGCATACGGCACCTCTGAGGAAATAGTAGCTCATATTGTGCAGCATTGCGATGACAACACAGCGTTAAGGCGTCAGCCGCAAACCGGGCCACGCAAGTATAAAAGAAGACGCAAGCTGAAACCTCATGAGACCAATACAATATTGCGCAGAAACGAGTTGTACGACATTATAGaaggtggtgatggtgatggcgGCGATGGCAGTGTTGGAATTGGAATTGGCGATGGCGGTGGCGGAGGCGGTGGCGGTAGCGATGGCGATGGCGATGGTTGTGGCGGTggcagtggcggtggcggtggcgatggcggtggcggtggtggtggtggtggtggtggcagtGCCAGCGGTGGTAACGGAGGTTCTGATTCTGAAGAAAATATGAAACGGAAACTTGGTCGTAAAAACAAACAACATAGATCCAATGTTGAGGAAGGCTATCAGAATGTGTTGAAAAGTTTTGAAAGTTCGCTGCAGAATATAAACTCAATCGTTAGTAACTCTAAATTGAATACATCAAAGTCGAAACTTTCAAAAAAAAAGTTGcgcaaagaggaaaagaaaagtgAGACGCAGGCGTCGAATCAATCAGGCCGACCGAAAATGATCCACACGCAAAAGACGCGAGTGCCGGTGGAGGTAGGTAGCGACGGCGTAAAAAAGGgacagaaaacaaaaacaatgGTGACACGAACGCCGAAAGTCATGCCAAATGAACACAAAGTAGGAATTTTTCCGAGCGGTGAGCGGAATCGACCACGTACTAAAAATGTTAGTTACCATATTGAGGGCAAACAGCAACTCTCACCGGCGACATTCTCAAAGATGAAGGAGGAAGTAGATTCAACGTCgacacaacagcagcaacaatcGCAGCAGCAACTATTGCTGGCTAACATTAAGGTTGAATTAGGCACACAAAAAATAGCGCCTACAGGTGACAGTCACAGGAATAATAACGGTAATATGCTTGCTCTTGTCAAGAATGATTCGCAGACGAAGAAGAAATCAACTGCCTTAAAGAAATCTAAAAGAcagaaacatataataaaacaagaaCGCTCGGATACATCCGAGTCAGGTATAGAAGAACAGGAACAGCAACAACATCAAGAGCATCACTTACAATTACGAAACAACAACAGTGTGATGGAAAACAGAAGTGCTCATGCACGAATGATGGAGCATGCAATGGATGGCAGTAACTTAGAAGTGGCCTTTGAGGCGAGCGTCGTAACTGCAGAAGGCCATGAGGATGAGGACGAcgatgaggaagaggagagCATTTTGCCTGACACCGGGGAAGAAATCGGCAATGGAGATGTTAAACTCAGTGTGAAGGTGGAATCAGCACCACAACGGATGCTGGCTGTTCATAGTGTTATCACACCGGTAGATGATGTTCCAGAGACGATAATACCGGACGCTGTGGAATATACATGCGAAATGTGTGCGGCAGTGTTTTCAAGCCGCGCAGAGTTATTGGTCCATGTACCGATACACATTTGA
Protein Sequence: MDVGGDLTLQWVEEVGNVELHEEVICDLEAQLVATEEEVIGACEEVAVEETVESVPDVASTTESEILMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVIADNWNRQGPDDGVEIPEAKVTHDNLLEYDDMEIPLPINQDSNINIRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHSCNLCGARYVRKCDLNNHLKIHAYAPSSRDSLEDEINDEDSLVPEEEDMTTTVKGRRKKVQSSVPRKRKGNNVGLPKRHNIEDASRVKMEMGNSNYASSSRWHEEMSVTSEQQPPRWPVTDPTKPYVCQFCGVGFAREKALASHARVHGGDSPFECTSCGEMFWDINSLQEHFRVKHGGTIPQSDTEEYDNDTAYTSEERFGEFYCNTCAAPFHRLDLLKRHQKTHIKQEMDTIESSSQHHVCNVCGEWFEEALALLAHAELHARSPSRRCLLCGARCRDDADVAEHVRQYHAEDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCVGSATPFLCKVCGEAYGTSEEIVAHIVQHCDDNTALRRQPQTGPRKYKRRRKLKPHETNTILRRNELYDIIEGGDGDGGDGSVGIGIGDGGGGGGGGSDGDGDGCGGGSGGGGGDGGGGGGGGGGGSASGGNGGSDSEENMKRKLGRKNKQHRSNVEEGYQNVLKSFESSLQNINSIVSNSKLNTSKSKLSKKKLRKEEKKSETQASNQSGRPKMIHTQKTRVPVEVGSDGVKKGQKTKTMVTRTPKVMPNEHKVGIFPSGERNRPRTKNVSYHIEGKQQLSPATFSKMKEEVDSTSTQQQQQSQQQLLLANIKVELGTQKIAPTGDSHRNNNGNMLALVKNDSQTKKKSTALKKSKRQKHIIKQERSDTSESGIEEQEQQQHQEHHLQLRNNNSVMENRSAHARMMEHAMDGSNLEVAFEASVVTAEGHEDEDDDEEEESILPDTGEEIGNGDVKLSVKVESAPQRMLAVHSVITPVDDVPETIIPDAVEYTCEMCAAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00452734;
90% Identity: -
80% Identity: -