Basic Information

Insect: Odontomachus brunneus
Gene Symbol: -
Assembly: GCA_010583005.1
Location: NW:35490-40000[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00019 0.012 15.4 4.0 1 23 231 253 231 253 0.98

2 11 0.018 1.1 9.2 11.8 1 23 259 281 259 281 0.95

3 11 4.7e-05 0.003 17.3 6.6 1 23 287 309 287 309 0.99

4 11 0.00032 0.021 14.7 1.6 1 23 315 337 315 337 0.95

5 11 7e-07 4.5e-05 23.1 1.8 1 23 343 365 343 365 0.97

6 11 2.1e-05 0.0013 18.4 1.1 1 23 371 393 371 393 0.97

7 11 6.1e-05 0.0039 16.9 1.6 1 23 398 420 398 420 0.97

8 11 2.3e-05 0.0015 18.3 0.0 1 23 426 448 426 448 0.96

9 11 2e-05 0.0013 18.5 0.2 2 23 460 481 459 481 0.96

10 11 1.2e-06 8e-05 22.3 2.0 1 23 550 572 550 572 0.97

11 11 2e-05 0.0013 18.5 4.6 1 23 582 604 582 604 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00019	0.012	15.4	4.0	1	23	231	253	231	253	0.98
2	11	0.018	1.1	9.2	11.8	1	23	259	281	259	281	0.95
3	11	4.7e-05	0.003	17.3	6.6	1	23	287	309	287	309	0.99
4	11	0.00032	0.021	14.7	1.6	1	23	315	337	315	337	0.95
5	11	7e-07	4.5e-05	23.1	1.8	1	23	343	365	343	365	0.97
6	11	2.1e-05	0.0013	18.4	1.1	1	23	371	393	371	393	0.97
7	11	6.1e-05	0.0039	16.9	1.6	1	23	398	420	398	420	0.97
8	11	2.3e-05	0.0015	18.3	0.0	1	23	426	448	426	448	0.96
9	11	2e-05	0.0013	18.5	0.2	2	23	460	481	459	481	0.96
10	11	1.2e-06	8e-05	22.3	2.0	1	23	550	572	550	572	0.97
11	11	2e-05	0.0013	18.5	4.6	1	23	582	604	582	604	0.97

Sequence Information

Coding Sequence: ATGTGTACCGCTCCCAGCAATGCAAGCGCAGGATTTGGTGGATACGCTTGGTCCTTCAGCGGCCCAGGAACGGAGAGCCGCGAGAATGCTCAGAACGACCTTACGACTAATATCAATTATGCTGTCAACAATAATCAAGACCAAGGATCCAGTCAGAAGATACAGGTTGATATCAAGCCAGCCAAGGTCGCCGCAACCACTCATCGTCGTCCAATGTTCGCAATGAATGACAGCTGTCAGCAGACACCGACTACACATCATGGCCATACCGCTGGAGCACACAATCAAACCCATGGCACTCATGTTCGTACTAAGAAGCATCACGACGTTTTCTCGTTGCCGTGCGACAAAGGAGGCTGCAATTGCGACTCGCCACATCCCACGCCGGCACCCACTTTGTTTCCAAACACCCTGGTCTTTACGACCGACAAGCACGCCATGAGCAAGCACTTCATGACACCCCTCGGGCCGTTGCAGCTCACAGCGGAAGAGTGCAATGAAATCTTGATGAAGAGAGCCGCCGCGGCGTCCAATCAGGCTACTTCGGCGAACAATGTCACTACGAACCAGACGGACAGCACCGCTCACTTTGGTCATGTTCTCACTCATGTGAATACAACGCAGATCGAGACCAAGGTGAAACAGCAGCAGGACATGGGTAGCCAGGTCCGCGTGCCGAAGGAACGGCCGTACTCCTGTACGGAGTGTGGCAAGTCCTTCCTATTGAAGCATCATCTCACGACGCACGCGAGAGTACACACCGGCGAGCGACCTCACATTTGCGTACATTGTGGCAAGAGTTTCGCGCACAAACATTGTCTTCATACGCATTTGCTGCTGCACAGCGCCGAGAGGCCGTACCAATGTCGCGAATGTAAAAAGTCCTTTACGCTCAAGCATCATCTCGTCACGCACACTCGCGTGCACACGCGGGAACGACCGTTTGTCTGTCAGGAGTGTGGTAGAGCGTTTCCTCTCAAGCGTCACTTGGTGACGCACAGTAAGTTCCACTCGGGGGAGAGACCTTACGTTTGCGAGGAATGTGGCGAGTCTTTCTCCCAAAAGGATCACCTCACCATGCATTCGCGCTTCCACGGCAGCCTACATCCGTTCGTTTGCCATGATTGCGGTGCTACCTTCCAGAGAAAGTTTGAGTTGGTCAATCACGGCCGTCTACATGGCAGAAACCCGCATTCGTGTACTGTTTGTGGAAAGGAATTTCTGCAAAAGCGAACACTCTTAGCTCATATGCGCTTACATACTGGCGAAACGCCTTTCGCCTGCACCGTTTGTGGAGAAGCATTCCCTCGGAAAGCAGATCTGGTCACTCACTCCAAGATTCACAACAACAATGCGAATGCCGATGAGAAGTCTCTTACATGCAGAGAATGCGGACTCGAGTTTTCGAATCGAGAAGCCCTGACTTTGCACCTGAGGCTACATTCTGGTGATCGCACACTCGTGACAGATCTGTGCGGTCTGGCAGCCGCTTTCCAACAAACCCCAGGACATTTCCTCACTCCGAATACTCCAACAACTCATCAGtatttaCAGATGAATGGTCCGATCGGGACGCCCGGCGTTAGTCATATGCATGGAGCGACGCAAACGTCACCACCGGTGGGTACAGGGCCGAAACCCAAACCGCACATCTGTCCGGACTGCGGTCGCGGTTTTGCACAAAAGCATGGCTTGTCGCAGCATCAACGACGTCATACGGACGGCAGCTGCCATATAAGGTCTCATGTATGTGACAAATGTGGCAAAGCTTTCTTCCAGAAGAATCATTTATTGCTGCACCAGCGCCAGCATATGGACCCGCCACCCAGTATACTCAGGCAACAGCAGAGACAGGCTGCTCAAGCCGCTGCCCAACAGGCACAACAGCAACAGGCGCAGCAGCAACAAGCACAGCAGCAACAGGCGCAGCAACAGCAAGCGCAGCAGCAGCAagcgcagcaacagcaacaagtccagcagcagcagcaagtgCAGCAACAAGTGCAACAGCAGCCGCAGCAACAGCAACCGCAACAGCAATCATGTACCGTCGATACGAAAACGATGCAGCTGCAGGCGATACAACAGCAGGTACAACAagtgcagcagcaacagcagcaacaacagcagcagcaacaacaacagcaacaacaaacgcaacaacaacaagCATGTCCCGTAGACTCTAAAGCAATACAGCTGAATGTCACCATGTGA
Protein Sequence: MCTAPSNASAGFGGYAWSFSGPGTESRENAQNDLTTNINYAVNNNQDQGSSQKIQVDIKPAKVAATTHRRPMFAMNDSCQQTPTTHHGHTAGAHNQTHGTHVRTKKHHDVFSLPCDKGGCNCDSPHPTPAPTLFPNTLVFTTDKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASNQATSANNVTTNQTDSTAHFGHVLTHVNTTQIETKVKQQQDMGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPYVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRNPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKADLVTHSKIHNNNANADEKSLTCRECGLEFSNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNTPTTHQYLQMNGPIGTPGVSHMHGATQTSPPVGTGPKPKPHICPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQQQAQQQQAQQQQAQQQQAQQQQAQQQQQVQQQQQVQQQVQQQPQQQQPQQQSCTVDTKTMQLQAIQQQVQQVQQQQQQQQQQQQQQQQQTQQQQACPVDSKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899020;
90% Identity: iTF_00452725;
80% Identity: -