Basic Information

Insect: Odontomachus brunneus
Gene Symbol: -
Assembly: GCA_010583005.1
Location: NW:1380924-1394027[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.017 1.1 9.3 3.1 1 23 364 386 364 386 0.97

2 19 0.0074 0.47 10.4 0.6 2 23 468 489 467 489 0.98

3 19 0.0057 0.37 10.7 0.8 1 23 574 597 574 597 0.94

4 19 0.00066 0.042 13.7 0.5 1 23 600 622 600 622 0.96

5 19 4.9e-05 0.0032 17.2 0.6 2 22 695 715 694 715 0.94

6 19 2.3e-06 0.00015 21.4 1.3 1 23 722 744 722 744 0.96

7 19 0.00011 0.0073 16.1 1.7 1 22 750 771 750 774 0.91

8 19 0.00051 0.032 14.1 1.3 2 23 847 868 846 868 0.96

9 19 8.7e-05 0.0056 16.5 5.4 1 23 913 935 913 935 0.97

10 19 0.0003 0.019 14.8 0.9 1 20 940 959 940 961 0.94

11 19 0.0067 0.43 10.5 1.3 2 23 972 993 972 993 0.97

12 19 2.5e-05 0.0016 18.2 0.6 2 23 1032 1053 1031 1053 0.97

13 19 5.3e-05 0.0034 17.1 2.0 1 23 1058 1080 1058 1080 0.94

14 19 8e-05 0.0051 16.6 3.1 1 23 1086 1108 1086 1108 0.98

15 19 4e-06 0.00026 20.7 0.4 1 23 1123 1145 1123 1145 0.95

16 19 3.3e-07 2.1e-05 24.1 0.6 1 23 1151 1173 1151 1173 0.99

17 19 4.3e-05 0.0027 17.4 0.4 1 23 1179 1201 1179 1201 0.97

18 19 0.0011 0.071 13.0 4.1 1 23 1207 1229 1207 1229 0.96

19 19 0.0045 0.29 11.1 0.6 1 20 1235 1254 1235 1256 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.017	1.1	9.3	3.1	1	23	364	386	364	386	0.97
2	19	0.0074	0.47	10.4	0.6	2	23	468	489	467	489	0.98
3	19	0.0057	0.37	10.7	0.8	1	23	574	597	574	597	0.94
4	19	0.00066	0.042	13.7	0.5	1	23	600	622	600	622	0.96
5	19	4.9e-05	0.0032	17.2	0.6	2	22	695	715	694	715	0.94
6	19	2.3e-06	0.00015	21.4	1.3	1	23	722	744	722	744	0.96
7	19	0.00011	0.0073	16.1	1.7	1	22	750	771	750	774	0.91
8	19	0.00051	0.032	14.1	1.3	2	23	847	868	846	868	0.96
9	19	8.7e-05	0.0056	16.5	5.4	1	23	913	935	913	935	0.97
10	19	0.0003	0.019	14.8	0.9	1	20	940	959	940	961	0.94
11	19	0.0067	0.43	10.5	1.3	2	23	972	993	972	993	0.97
12	19	2.5e-05	0.0016	18.2	0.6	2	23	1032	1053	1031	1053	0.97
13	19	5.3e-05	0.0034	17.1	2.0	1	23	1058	1080	1058	1080	0.94
14	19	8e-05	0.0051	16.6	3.1	1	23	1086	1108	1086	1108	0.98
15	19	4e-06	0.00026	20.7	0.4	1	23	1123	1145	1123	1145	0.95
16	19	3.3e-07	2.1e-05	24.1	0.6	1	23	1151	1173	1151	1173	0.99
17	19	4.3e-05	0.0027	17.4	0.4	1	23	1179	1201	1179	1201	0.97
18	19	0.0011	0.071	13.0	4.1	1	23	1207	1229	1207	1229	0.96
19	19	0.0045	0.29	11.1	0.6	1	20	1235	1254	1235	1256	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATAGATACGTCGGAACCACCGCCACAGCAGAACGAGGATGCATTTGTGGCTACAGTGGAGGAGATGTGCCGTGTATGTTTGGTTGGCAACCTAGGGATGCGGGACCTTTTTCAAGATAATGAGGACGCGTCCCTCTCGACAAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGTGATGGTCTACCAGCACAGTTGTGTTGCATCTGTGCTGACAAGTTAGAGTCAGCATATGAATTCAAATTGCAAGTGGAACAAGCAGATGGTGTTCTGAGAGAGAGACTGCTTGGTATGAATATAAAAGAGGAATTGTTTTTCAACGAGGTTGAAGTACAGTTAGATGCTGAGAGAAATGATGCTATAGGTGAGTTAAGTGATGGTGCCggttacgaatctgaagtcacaGAACTATCAGTACAGTCAGAAGATGACAAAAACATCCTGAAAGATGGACAGCTGGTACTTTTACAAGTTGAAAAATTGGAGCAGACAGAGGGAGTACAACAAAGTGCAAAACAGAATAATTTGCAGAAGATTACACAGGAAATTAGCGAAAGCATCGGCGAGGAATTGCAGCAGGAACTGACCGGTGCAAAGGACACAGATGACTTGAATCTCATCGAAGCATCTAGGAATCCGGAATCTAACAAAGACGAGACTGTCATTCGGAGTTGTGCAGATGCGATTCCGGCAGACGAGCACGATTACATCATACAGCTACAACACTCGACGCCCGTAACCAACCTCTCTACACCGACAGACACAATGGAAACCACCCCACCACCTATGGAATCAGAACAACAGGACGACGCAGCGGAACGTCCGAAAGCGTCCAACGAGTCGGATACCCAAATTGAACAAGATCAAAACAAACAGCTGGAAATACCGGAACCGCTGAAGATCGACGAGACGATGGAGCAAGATTCATCACAGGGCGAGACCAGGAGGAGCAAACGCAAACTGGCTCGTCGGACGAACACTGAGAGGGACTCCGACGAGGAGAACTATTTCGAGAATCTGAATCTCAGTTCCCGACTTAAGAAGGCGCAAGCGGACAAGGAGAAGGTTTTCTTTATGTGTTACCTGTGCGACAAGCAATTCCTGTCAAAGAGCGTACTAAAGGAACATATGCATTCTCACGAGGAAGTTCGACGCGCCTTAACCCTGAAGAAGACGCCGGAAAAGCCGCAGAAGATGGCCACTATTAGCAGCGCGTCCctaccgccgccaccgcgcAGCAAGACGCCGCTGCCGTCGTCTGGCAagacgctgccgccgccgtcactACCGTCTGGCAAGacgctgtcgtcgtcgccgtcgctgtcCGATAAGACGCCGCCACCATCTGGCAAGACGACGCCGCCATCCGGCAAGAAAGCTAATAAATGTCCTCAATGCGGCAAAGAATACCTGTACATAATTTCGTTTAATAAGCACATGAAGATGCATGAACGGGAAAAGGAAGAGGAGTACAACTCGATGCTTATCGACGTGCCGGTCGTCGAGGAAGAATTTATGGAATTGGATGATACGGATACAGAAGGTAGAAGGCGGACGAGAAGAAAAGAACGGAAAGTTTACGTGACGCcggatgatgacgacgacgatagcGACGATGACGACTATGACGTCGAACAGATCGAGAAGAACAGCGAGATTAAGAAGAAAAAGCCAGCACCGATGTTGAGCCCTAGCACCGATTTCTCGTGCGACAGGTGTCTACAGTTATTCGCTACGAAGCGAGGTCTGCAGAGGCACATGTCCGCGCGACACCCCGCTTTCGATTGCGAAGTGTGCAAGAAGACGTTTGAGTCCGCAAATGTGTTGCAAATCCACCGTACTAGGCATGTAGTCGAGGGTATACTGAGTGAGCAGGATCTAGACGGGGACATGAAGCAGATGAGCGCCGAAAACAACGAGGAAGTAGGCGAAGGTTCTATCTTCGAAGACGAAGGGGAAAACAggaacgacaacgacgacgagggtGAGGAGAACGAGAATGATGACGGAAACGGCGAAGTCAAGAAGGAGTTCGAAGCGGAGGAGGTCGAAACGAAGGAGCTCAAGTGTCCTAAGTGCTCGGCGACGTTCACACGCAGAAAAACGCTAGTGAAACACATGGAGACGCGTTGCGGGACCAACATTTACAGCTGCAAAATATGCGGCCAACAGTTTTCGAAGAAGGATCAGCTGCGTAGACATGTCGAACAGCACGGCCGTGTCAAGACTTACAAGTGTACTCAGTGCAACAAGACCTTCGGCAATGAGTTCACTCTGAGAAATCATCTGATCTCCACGAACCACAAGACATTCATGTACGGACAAGAGTACGATCCCAATAAGCGTATGAAGCGCGTGGCCGCCAAAGTGGCGCAGAAGATCATCGACAAAATCAAGACGGAGGTCGAGATAGATGATTTGGGCGACGATGGTAATGATGACAAGACCTATAAAACTTATGCTATACTGAGCGGTCATCCTAAGCGTAAGCCAAAGAAATATAATGGCACGAAACATATTGAGTGCGACCAATGTCACAAGGGATTAAGCTCAAAGCAGTCGCTGATGAGGCATCTGGAGTCACATCAACTGAGGGAAGAGAAGTTGAAGAAGGCTGTTTTAGAGAAGAGACAGAAGATGAAGATCGAAAGTAACCTGGGCGATCATCGTGATAACGACTCGGATTTCGACAGTGGCATGGACTGGCCGATGGACATTCATGAGTGCAGCACGTGCAAAAAGCGCTACACCACGAAGAAGTCGCTGCAACGGCACCAGCTGTTGCATGAGGAACCGAACTTTGAGTGCGACATTTGCAACCTCAAGTTCTACCGCAAGGATAAGCTGAAGGTGCACTATGACAAGTGCTCGGAGAAGAACCCGGATCAAGTGAGGAAATGTAGCATCTGCGGCGACCGATTCGAGAACCACGAGATGCTGCGTATACACCGCGTGACCCATGTGACCGAGGGCATTCTGACCGAAGAAGATCTAATGGACCTGGAGCCGATGTCTGAcggagaggagaagaaagagaaaattgtaCGCAAGAGGCGCACCGACATCGTGGGCCTCGAGTGCACTGAATGCAACAAGCAATATACCTCACGAAAAGGCTTACTGCGACATATTCAAGTGCACGAGGGCAAAAAATTTCTATGCGACATTTGTCCGAAAAAGTTCTACCGGCGCGAGCATCTCAAGCTCCACGTGGCCAAGCACAACATGGTCAAGCCGTACAAATGCCACCGCTGCACTAAGCGCTTCATCAAGGAGGACCAGCTAATTGCCCACTTATCCAAGCACGACCGTATGtttaagaagaaagaaagtgaCACCACCAAGAGATTCCTATGCGAGATCTGTTCTAAGAGCTTCACGCAGTCCACTACGCTGATAGCGCACTTGCGCGCCCACAACGGCATTAAGCCGTATGTGTGCGAGGTATGCTCCCGACCGTTCACCACTAACGCCTATCTGAAGATGCACATGCGCACGCATACACAGGAGCGACCGTACATCTGCCAATATTGCTCGCGCGCCTTCGCCCGCGCAGATACGCTTTCAAACCACCTGACTTCGCACACCGGTGAAGCAAAGTATCATTGTAAGCTGTGCCCGCGTAATTTCCGTCGGCTCAAGTCGCTCAAAGAGCACACGTTCATCCACACTGGCCAACGACCCTATGAATGTCCAACCTGTGATCGCAAGTTCAACAACAATGGCAGCCGCTACGCGCATAGTAAGCGCTGCAAGCAGAACATGCTACAGAATCAGAATCGTGTAGCACAGCAGCAGGAACAAggacagcagcagcaacaacaagaGCGggaacagcagcaacagcaacaacttcaagagcagcagcaacagcaacaacttcaagagcagcagcaacagcaacaacttcaagagcagcagcaacaagaggaagaggaggagcagcaacaacagcaccACCAGGCACAACAGATTCTGCAGGCACCTCAGCATGTTCAGGTGCAGCTACAAGAAGTGCTCCAGCCGAGAATGATGCTCGGTCAGACGCAAGTGGTGAAGGCGCAGAACATTAAGACAATTGCTATCGCAAGACAGCCCGTTATCGAACCGACAATAGTAGGTGCGCACCAGGTGATGCAGCATCAGGAAATATTAATGCCGTTGATATTGCCGCTCACCGTCACCCTCGCTGATGTTGGCGAGGAGGTGATACTGCCGGAGGGTACGAAGATATTCACGACGACGTAA
Protein Sequence: MDAVEIDTSEPPPQQNEDAFVATVEEMCRVCLVGNLGMRDLFQDNEDASLSTKAMSFANVKMLPGDGLPAQLCCICADKLESAYEFKLQVEQADGVLRERLLGMNIKEELFFNEVEVQLDAERNDAIGELSDGAGYESEVTELSVQSEDDKNILKDGQLVLLQVEKLEQTEGVQQSAKQNNLQKITQEISESIGEELQQELTGAKDTDDLNLIEASRNPESNKDETVIRSCADAIPADEHDYIIQLQHSTPVTNLSTPTDTMETTPPPMESEQQDDAAERPKASNESDTQIEQDQNKQLEIPEPLKIDETMEQDSSQGETRRSKRKLARRTNTERDSDEENYFENLNLSSRLKKAQADKEKVFFMCYLCDKQFLSKSVLKEHMHSHEEVRRALTLKKTPEKPQKMATISSASLPPPPRSKTPLPSSGKTLPPPSLPSGKTLSSSPSLSDKTPPPSGKTTPPSGKKANKCPQCGKEYLYIISFNKHMKMHEREKEEEYNSMLIDVPVVEEEFMELDDTDTEGRRRTRRKERKVYVTPDDDDDDSDDDDYDVEQIEKNSEIKKKKPAPMLSPSTDFSCDRCLQLFATKRGLQRHMSARHPAFDCEVCKKTFESANVLQIHRTRHVVEGILSEQDLDGDMKQMSAENNEEVGEGSIFEDEGENRNDNDDEGEENENDDGNGEVKKEFEAEEVETKELKCPKCSATFTRRKTLVKHMETRCGTNIYSCKICGQQFSKKDQLRRHVEQHGRVKTYKCTQCNKTFGNEFTLRNHLISTNHKTFMYGQEYDPNKRMKRVAAKVAQKIIDKIKTEVEIDDLGDDGNDDKTYKTYAILSGHPKRKPKKYNGTKHIECDQCHKGLSSKQSLMRHLESHQLREEKLKKAVLEKRQKMKIESNLGDHRDNDSDFDSGMDWPMDIHECSTCKKRYTTKKSLQRHQLLHEEPNFECDICNLKFYRKDKLKVHYDKCSEKNPDQVRKCSICGDRFENHEMLRIHRVTHVTEGILTEEDLMDLEPMSDGEEKKEKIVRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKFLCDICPKKFYRREHLKLHVAKHNMVKPYKCHRCTKRFIKEDQLIAHLSKHDRMFKKKESDTTKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLSNHLTSHTGEAKYHCKLCPRNFRRLKSLKEHTFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNMLQNQNRVAQQQEQGQQQQQQEREQQQQQQLQEQQQQQQLQEQQQQQQLQEQQQQEEEEEQQQQHHQAQQILQAPQHVQVQLQEVLQPRMMLGQTQVVKAQNIKTIAIARQPVIEPTIVGAHQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -