Basic Information

Insect: Odontomachus brunneus
Gene Symbol: -
Assembly: GCA_010583005.1
Location: NW:730018-746086[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.7e-05 0.0024 17.6 2.2 1 23 461 483 461 483 0.97

2 18 1.4e-05 0.00092 18.9 1.9 1 20 489 508 489 511 0.94

3 18 4.5e-06 0.00028 20.5 1.4 1 23 517 539 517 539 0.98

4 18 5.8e-05 0.0037 17.0 4.4 1 21 545 565 545 567 0.95

5 18 4e-05 0.0026 17.5 5.7 1 23 573 595 573 595 0.99

6 18 1.8e-05 0.0012 18.6 5.3 1 23 601 623 601 623 0.97

7 18 5.1e-05 0.0033 17.2 7.0 1 23 629 651 629 651 0.96

8 18 6.7e-08 4.3e-06 26.3 2.7 1 23 657 679 657 679 0.98

9 18 4.9e-05 0.0032 17.2 6.7 1 23 685 707 685 707 0.97

10 18 1.5e-05 0.00098 18.8 5.8 1 23 713 735 713 735 0.98

11 18 4.1e-07 2.6e-05 23.8 2.9 1 23 741 763 741 763 0.98

12 18 6e-06 0.00039 20.1 7.8 1 23 769 791 769 791 0.98

13 18 1.9e-05 0.0012 18.5 9.1 1 23 797 819 797 819 0.98

14 18 2.5e-05 0.0016 18.2 7.5 1 23 825 847 825 847 0.98

15 18 0.0012 0.077 12.9 8.8 1 21 853 873 853 875 0.94

16 18 9.2e-06 0.00059 19.5 0.4 1 23 881 903 881 903 0.98

17 18 0.22 14 5.7 4.6 1 23 913 935 913 935 0.98

18 18 3.5e-07 2.3e-05 24.0 1.3 1 23 941 963 941 963 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.7e-05	0.0024	17.6	2.2	1	23	461	483	461	483	0.97
2	18	1.4e-05	0.00092	18.9	1.9	1	20	489	508	489	511	0.94
3	18	4.5e-06	0.00028	20.5	1.4	1	23	517	539	517	539	0.98
4	18	5.8e-05	0.0037	17.0	4.4	1	21	545	565	545	567	0.95
5	18	4e-05	0.0026	17.5	5.7	1	23	573	595	573	595	0.99
6	18	1.8e-05	0.0012	18.6	5.3	1	23	601	623	601	623	0.97
7	18	5.1e-05	0.0033	17.2	7.0	1	23	629	651	629	651	0.96
8	18	6.7e-08	4.3e-06	26.3	2.7	1	23	657	679	657	679	0.98
9	18	4.9e-05	0.0032	17.2	6.7	1	23	685	707	685	707	0.97
10	18	1.5e-05	0.00098	18.8	5.8	1	23	713	735	713	735	0.98
11	18	4.1e-07	2.6e-05	23.8	2.9	1	23	741	763	741	763	0.98
12	18	6e-06	0.00039	20.1	7.8	1	23	769	791	769	791	0.98
13	18	1.9e-05	0.0012	18.5	9.1	1	23	797	819	797	819	0.98
14	18	2.5e-05	0.0016	18.2	7.5	1	23	825	847	825	847	0.98
15	18	0.0012	0.077	12.9	8.8	1	21	853	873	853	875	0.94
16	18	9.2e-06	0.00059	19.5	0.4	1	23	881	903	881	903	0.98
17	18	0.22	14	5.7	4.6	1	23	913	935	913	935	0.98
18	18	3.5e-07	2.3e-05	24.0	1.3	1	23	941	963	941	963	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACCGCGACCAGCCTTGGCAATGTAGGGAGTACCCCTCATTCGTCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCCGGACCGCTACCTCAGGTCTCGGTCTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGAGGTGGAGAGGCATCCTCCAAAGAGCCAGCCTCTTCACTGAACCAGGAAATGGCGTTGACTTCCAGCTCGCATCATCAGTCGACAGCGccgcatcatcatcatcaaccTTCGGTTAGCAGCAGCAGCCATCACAGTTCCCTGTCCTCGAATCCGCAGATACCGGTATCTCTACCTGGTCTGAACTTAGACGGCGCGCATATCCCGACGAGCGTTAGTCACTTGCAGGCCGCGCATGCACAAATGCAACAGCAAATGCAGGCGCAACAGCAACAGCTGCaccagcagcaacaacagcagcagccgccgccaccgcagcagcagcagcaacagcagcagcagcagcagcagtcttCCCATCATCAGATGCAGAATCACCAAAACGCCCAGAACAATGGACCGACCGCACACAGTCAGAGTGCGCAGCGAGACGACAACAAAGTCAAGGACGAGGGTGGCAGCTGCACCACCGAGCGCTGCAGCGACAATCAGGTTCACTGTCAAGTTCAATGTGATCTGCAATTACAACCGCCGCAAGATCTTCAACAGAGCTTgatgcaacagcagcagcagcaacagcaacagcagcagcaacagcagcagcagcagatcGGAGTGAACATCAGCGGTAACTCCAATACGGAGGGCGGTAGTCAGAACAATTCTGAGAAGCCTGAGAAGGAGAAGGAATTGCGGCAACTTAATATGACACAATTCCAAGTTCCTGACTTGAAACCAGGTGGACACATGATGGACGTGAGAACGGCGGACGGCTCGGTCGTAAAGATTAGCGCCGGGAATGAGCAAGATTTGGCGAAAACGCTCGGCGTCGAGATGGTGCAAAATATGTACAAGGTCAATGTCGAGGACATTAACCAGTTACTGGCGTATCATGAGGTTTTCGGCAAGTTGCAGAGTGAAATCGCTGCTGGGACGACATTAGTAGGTAGCACTGTACCTACACAAACAGTTACCACGATACAGAACGGCACGCCGATCGTGCAACAGGTCCAGCTGAACAAGTTCGACATCAAGTCGAGCGACGGCGAGGCGACGCCCGGCCCGAGCGCTTCGCCCGTGTCGGTCGGCAGTCATTCCTGCGAAATATGCGGGAAGATCTTCCAATTTCGTTATCAACTGATTGTACACCGTAGATACCACACGGAGAGAAAGCCGTTCACGTGTCAGGTGTGCGGCAAAGCGTTCTCGAACGCAAACGACCTAACGCGTCACGGCAAGTGCCACTTGGGTGGATCCATGTTCACCTGCACAGTTTGCTTTCATGTCTTCGCGAACGCGGCCTCGCTGGAGCGTCATATGAAGAGACACGCCACCGACAAACCGTACAATTGCACGGTCTGCGGCAAGAGCTTCGCACGCAAAGAACATTTGGATAACCATACGAGATGCCACACCGGCGAGACACCATATCGATGCCAATTCTGCTCGAAGACATTTACCCGAAAAGAACACATGGTAAATCACGTTCGCAAACACACTGGTGAGACTCCCCATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGAGAAACGCCTCATCATTGTACAGCCTGCGGCAAGAAGTATACGCGCAAAGAGCACCTTGCTAACCACATGCGCTCGCACACGAACGACACGCCGTTCCGTTGTGAAATATGCGGTAAGTCGTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCACACGGGCGAGACGCCGCACCGCTGCGACTTCTGCTCGAAGACGTTCACGCGAAAGGAGCATCTCCTCAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTCAATACTGTCCGAAAGCATTTACGCGGAAGGATCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGTCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTGCGCATCCACACTGGCGAATCTCCACACAGGTGTGAGTTTTGCCAGAGGACGTTCACCAGGAAAGAACACCTCAATAATCATCTCCGTCAGCACACCGGAGATTCCTCACACTGTTGCAACGTGTGCTCCAAGCCGTTCACAAGAAAGGAACATCTCGTGAATCACATGCGTTGCCATACTGGTGAACGTCCATTTGTGTGCACAGAATGTGGCAAAAGTTTCCCGCTGAAGGGCAATCTCCTATTTCATATGCGCTCGCACAATAAGGGCAGCAACGCCGAGAGGCCGTTCCGCTGTGACCTGTGCGCCAAAGATTTCATGTGCAAAGGACACTTGGTCTCGCACAGACGCTCGCACTCGGACGAGCGACCGCACAGTTGCCCAGATTGCGGCAAGACCTTCGTCGAGAAGGGCAATATGCTGAGACATCTGCGTAAACACGCGGCCGAGGGTCCGCCGACGCAGGTCAGCACCCCGTCGGCCATACCGCAATCCGGCGTTCTGCCAataccggcggcggcggtgctcGTGGGACACCCGTTGGCACCGCCGGCACCCCCGGTGGTGCCGCAGCACACGGTGGTCGTGCCCACTCCGCCGGGTGTACTAACGTCGTACTAA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATSLGNVGSTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGGGEASSKEPASSLNQEMALTSSSHHQSTAPHHHHQPSVSSSSHHSSLSSNPQIPVSLPGLNLDGAHIPTSVSHLQAAHAQMQQQMQAQQQQLHQQQQQQQPPPPQQQQQQQQQQQQSSHHQMQNHQNAQNNGPTAHSQSAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQQQQQQQQIGVNISGNSNTEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHSCEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAASLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQFCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCAKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00899003;
80% Identity: -