Obru001544.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- Polr2D
- Assembly
- GCA_010583005.1
- Location
- NW:1376467-1379940[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-12 1.9e-09 36.9 0.1 4 45 110 151 108 152 0.96 2 2 3.7 2.8e+03 -2.1 0.2 5 17 411 423 411 424 0.81
Sequence Information
- Coding Sequence
- ATGGCGAACCCGAATCTCACGGATATGACGGAGGAAGATGCGGCGGACTTGCAGTTCCCGAAAGACTACGATCCACTAAGCGAAACGTCTAAGTCCGAGTGTGATGTTGACCTCGAGGTATCAGTCCTCAAGGACGAAATCCCTATCTCAGATCCGACATGTCGTGTATGCAAGTCGACTTTGGTGGAGCCATACGTGCGTTGCGCCGTGTGCGTGAATGTCGAGATATGTCTGCCTTGTTTCGCCAAAGGCTGCGAGATCGACACGCACAAGAACGATCACAACTACATGATTATAAAGAACGAGTTCCCGCTGTTCGATAGCGGTTGGAGCGCCATGCAAGAGACAAAGCTGCTTGACTTGATGCTGCAATGCGGTTTCGGCAACTGGAGTGACATAAGCCACGCGATGGGTAGAACCGCGAAGGAGTGCAAGCAGCATTATCTGCAGCACTACGTGGACAATCAGACATTGCCAGATCTGCCGAAATTGAAAGAGAACCGAACTAGCTTATTCAGTTGTGATCCGATTCCTTTTTTGTACAAGCTGCAAGATCTTGACGAGCCGCCCAGGTTCGCACCGGACACGGCCAATGGCAAACTGGTGGCAGGCTACAACGCGGCGCGCTCGGACTTCGAGGTGAATTTCGACAATGATGCAGAATCGTTGGTCGCTGATCTTGATCTCGACGATTTTCAACCCGACGACAATATGTATGAACTAGGACGGGCTCTTCAAGTGGCAATGGTGCAGGTGTACAACAACAGGTTGAAGGAGCGAATGCGTAGATATGAAATAATCCGCAGGCATGGGCTGATTGCGTTGCGCAAGATCAATTCGTGGATAAAACGATTCGATAACACGATCCCCAGAGCGGAGCGACTGTTGATTTTCATGCAGCTCATGGATGGAATGGACTTCGATTATATCATGGAGGGTCTTCATCATGTCGGCGAGCTAAAGAATAATATCAACACACTATTAGAGTTCCGCAGAAACGGTCTTACGCACTTCCACAGCGTATCTATGTTTCAGAACTTGACAAAGATGCGCcaggagaacgagagagagaggaagcagTATCTGAACAATCCCGAGTACAGCTGGAAGAGTGTGCTGCCTGGTTACATCACGAATAGTAGCAATCCGATTCCAGAATTCGAAAACGCAGAGACACTGTTAATATCGGAAGTTTACATGTTATTGGAGCATAGGAAAGCCCAAAACGAATCCGCGGAGGAAGAACAAGAGTTTTCCGAGGTGTTTATGAAGAGCTTAACGTACACGAATCGATTTGGCAAGCTGAAAAATAAGGAGACAATCACAGCTGTTAGAAATTTGTTGGCGCAGAAGAAGCTGCACAAATTCGAACTTGCCTCGCTCGCTAATTTGTGTCCTGAAACTCCGGAAGAGGCAAAGGCACTCATTCCTAGTTTAGAAGGTCGGTTAGAAGACGAAGAGCTTCGAACAATATTGGAAGATATACAAACGAAAAGATCCTTACAGTATTGA
- Protein Sequence
- MANPNLTDMTEEDAADLQFPKDYDPLSETSKSECDVDLEVSVLKDEIPISDPTCRVCKSTLVEPYVRCAVCVNVEICLPCFAKGCEIDTHKNDHNYMIIKNEFPLFDSGWSAMQETKLLDLMLQCGFGNWSDISHAMGRTAKECKQHYLQHYVDNQTLPDLPKLKENRTSLFSCDPIPFLYKLQDLDEPPRFAPDTANGKLVAGYNAARSDFEVNFDNDAESLVADLDLDDFQPDDNMYELGRALQVAMVQVYNNRLKERMRRYEIIRRHGLIALRKINSWIKRFDNTIPRAERLLIFMQLMDGMDFDYIMEGLHHVGELKNNINTLLEFRRNGLTHFHSVSMFQNLTKMRQENERERKQYLNNPEYSWKSVLPGYITNSSNPIPEFENAETLLISEVYMLLEHRKAQNESAEEEQEFSEVFMKSLTYTNRFGKLKNKETITAVRNLLAQKKLHKFELASLANLCPETPEEAKALIPSLEGRLEDEELRTILEDIQTKRSLQY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -